RNA–Protein interactions for RNA: ENST00000637432.1

CACNA1A-240, Transcript of calcium voltage-gated channel subunit alpha1 A, humanhuman

APPRIS ALT2 TSL 5 BASIC

Gene CACNA1A, Length 7,809 nt, Biotype protein coding.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CACNA1A-240ENST00000637432 DEFB128Q7Z7B8 93 aa17.12■□□□□ 0.33
CACNA1A-240ENST00000637432 APOBEC3FQ8IUX4 373 aaKnown RBP17.12■□□□□ 0.33
CACNA1A-240ENST00000637432 LRRC71Q8N4P6 559 aa17.12■□□□□ 0.33
CACNA1A-240ENST00000637432 SYT2Q8N9I0 419 aaPredicted RBP17.12■□□□□ 0.33
CACNA1A-240ENST00000637432 FAM81BQ96LP2 452 aa17.12■□□□□ 0.33
CACNA1A-240ENST00000637432 RNPEPQ9H4A4 650 aa17.12■□□□□ 0.33
CACNA1A-240ENST00000637432 YY1AP1Q9H869 796 aa17.12■□□□□ 0.33
CACNA1A-240ENST00000637432 ASAP2O43150 1006 aa17.12■□□□□ 0.33
CACNA1A-240ENST00000637432 ECE2O60344 883 aa17.12■□□□□ 0.33
CACNA1A-240ENST00000637432 PRAMEF18Q5VWM3 479 aa17.12■□□□□ 0.33
CACNA1A-240ENST00000637432 ST13P4Q8IZP2 240 aaPredicted RBP17.12■□□□□ 0.33
CACNA1A-240ENST00000637432 CLMNQ96JQ2 1002 aa17.12■□□□□ 0.33
CACNA1A-240ENST00000637432 EMILIN3Q9NT22 766 aa17.12■□□□□ 0.33
CACNA1A-240ENST00000637432 NOVA2Q9UNW9 492 aaKnown RBP17.12■□□□□ 0.33
CACNA1A-240ENST00000637432 RGS7P49802 495 aa17.12■□□□□ 0.33
CACNA1A-240ENST00000637432 GSTA3Q16772 222 aa17.12■□□□□ 0.33
CACNA1A-240ENST00000637432 TCP1P17987 556 aaKnown RBP17.12■□□□□ 0.33
CACNA1A-240ENST00000637432 DDX56Q9NY93 547 aaKnown RBP17.12■□□□□ 0.33
CACNA1A-240ENST00000637432 RASA4BC9J798 803 aa17.11■□□□□ 0.33
CACNA1A-240ENST00000637432 KCNN4O15554 427 aa17.11■□□□□ 0.33
CACNA1A-240ENST00000637432 RASA4O43374 803 aa17.11■□□□□ 0.33
CACNA1A-240ENST00000637432 KRT33AO76009 404 aa17.11■□□□□ 0.33
CACNA1A-240ENST00000637432 LSG1Q9H089 658 aaKnown RBP17.11■□□□□ 0.33
CACNA1A-240ENST00000637432 ABI2Q9NYB9 513 aaPredicted RBP17.11■□□□□ 0.33
CACNA1A-240ENST00000637432 TRAPPC3O43617 180 aa17.11■□□□□ 0.33
CACNA1A-240ENST00000637432 GALNT17Q6IS24 598 aa17.11■□□□□ 0.33
CACNA1A-240ENST00000637432 ASNSP08243 561 aa17.11■□□□□ 0.33
CACNA1A-240ENST00000637432 CRKP46108 304 aa17.11■□□□□ 0.33
CACNA1A-240ENST00000637432 MDM2Q00987 491 aaPredicted RBP17.11■□□□□ 0.33
CACNA1A-240ENST00000637432 ROR1Q01973 937 aa17.11■□□□□ 0.33
CACNA1A-240ENST00000637432 ZFYVE28Q9HCC9 887 aa17.11■□□□□ 0.33
CACNA1A-240ENST00000637432 PSD3Q9NYI0 1048 aa17.11■□□□□ 0.33
CACNA1A-240ENST00000637432 PCDHA13Q9Y5I0 950 aa17.11■□□□□ 0.33
CACNA1A-240ENST00000637432 TOMM70O94826 608 aa17.11■□□□□ 0.33
CACNA1A-240ENST00000637432 PCNAP12004 261 aa17.11■□□□□ 0.33
CACNA1A-240ENST00000637432 CYTH1Q15438 398 aa17.11■□□□□ 0.33
CACNA1A-240ENST00000637432 POLR3FQ9H1D9 316 aaPredicted RBP17.11■□□□□ 0.33
CACNA1A-240ENST00000637432 ACTR5Q9H9F9 607 aaPredicted RBP17.11■□□□□ 0.33
CACNA1A-240ENST00000637432 DDX39BQ13838 428 aaKnown RBP17.11■□□□□ 0.33
CACNA1A-240ENST00000637432 PSMA3P25788 255 aa17.11■□□□□ 0.33
CACNA1A-240ENST00000637432 NUP62P37198 522 aaPredicted RBP17.11■□□□□ 0.33
CACNA1A-240ENST00000637432 NUGGCQ68CJ6 796 aa17.11■□□□□ 0.33
CACNA1A-240ENST00000637432 SEPT12Q8IYM1 358 aa17.11■□□□□ 0.33
CACNA1A-240ENST00000637432 TADA1Q96BN2 335 aa17.11■□□□□ 0.33
CACNA1A-240ENST00000637432 COPS7BQ9H9Q2 264 aaPredicted RBP17.11■□□□□ 0.33
CACNA1A-240ENST00000637432 ITSN2Q9NZM3 1697 aa17.1■□□□□ 0.33
CACNA1A-240ENST00000637432 LDHAP00338 332 aaKnown RBP17.1■□□□□ 0.33
CACNA1A-240ENST00000637432 TCN1P20061 433 aaPredicted RBP17.1■□□□□ 0.33
CACNA1A-240ENST00000637432 FAM136AQ96C01 138 aa17.1■□□□□ 0.33
CACNA1A-240ENST00000637432 MRPL4Q9BYD3 311 aaKnown RBP17.1■□□□□ 0.33
CACNA1A-240ENST00000637432 COQ6Q9Y2Z9 468 aa17.1■□□□□ 0.33
CACNA1A-240ENST00000637432 HARS2P49590 506 aaKnown RBP17.1■□□□□ 0.33
CACNA1A-240ENST00000637432 AMHR2Q16671 573 aa17.1■□□□□ 0.33
CACNA1A-240ENST00000637432 SH3RF3Q8TEJ3 882 aaPredicted RBP17.1■□□□□ 0.33
CACNA1A-240ENST00000637432 MTERF3Q96E29 417 aa17.1■□□□□ 0.33
CACNA1A-240ENST00000637432 EXOSC4Q9NPD3 245 aaKnown RBP17.1■□□□□ 0.33
CACNA1A-240ENST00000637432 SNX8Q9Y5X2 465 aa17.1■□□□□ 0.33
CACNA1A-240ENST00000637432 A0A0D9SFI3 127 aa17.1■□□□□ 0.33
CACNA1A-240ENST00000637432 ALOX15P16050 662 aaPredicted RBP17.1■□□□□ 0.33
CACNA1A-240ENST00000637432 SYTL1Q8IYJ3 562 aa17.1■□□□□ 0.33
CACNA1A-240ENST00000637432 PGRMC1O00264 195 aaKnown RBP17.1■□□□□ 0.33
CACNA1A-240ENST00000637432 CDK17Q00537 523 aa17.1■□□□□ 0.33
CACNA1A-240ENST00000637432 TBC1D9BQ66K14 1250 aa17.1■□□□□ 0.33
CACNA1A-240ENST00000637432 ZNF746Q6NUN9 644 aaPredicted RBP17.1■□□□□ 0.33
CACNA1A-240ENST00000637432 ICA1LQ8NDH6 482 aa17.1■□□□□ 0.33
CACNA1A-240ENST00000637432 USP44Q9H0E7 712 aa17.1■□□□□ 0.33
CACNA1A-240ENST00000637432 BHMT2Q9H2M3 363 aa17.1■□□□□ 0.33
CACNA1A-240ENST00000637432 NMRK2Q9NPI5 230 aa17.1■□□□□ 0.33
CACNA1A-240ENST00000637432 RALGAPBQ86X10 1494 aa17.1■□□□□ 0.33
CACNA1A-240ENST00000637432 PITPNM3Q9BZ71 974 aa17.1■□□□□ 0.33
CACNA1A-240ENST00000637432 LRRC14BA6NHZ5 514 aa17.1■□□□□ 0.33
CACNA1A-240ENST00000637432 KCNQ3O43525 872 aa17.1■□□□□ 0.33
CACNA1A-240ENST00000637432 GRAP2O75791 330 aa17.1■□□□□ 0.33
CACNA1A-240ENST00000637432 SERPINB3P29508 390 aa17.1■□□□□ 0.33
CACNA1A-240ENST00000637432 HDAC4P56524 1084 aa17.1■□□□□ 0.33
CACNA1A-240ENST00000637432 C10orf120Q5SQS8 335 aa17.1■□□□□ 0.33
CACNA1A-240ENST00000637432 IFNEQ86WN2 208 aa17.1■□□□□ 0.33
CACNA1A-240ENST00000637432 STAG2Q8N3U4 1231 aa17.1■□□□□ 0.33
CACNA1A-240ENST00000637432 ARAP1Q96P48 1450 aa17.09■□□□□ 0.33
CACNA1A-240ENST00000637432 PRKAB2O43741 272 aa17.09■□□□□ 0.33
CACNA1A-240ENST00000637432 ALS2CLQ60I27 953 aa17.09■□□□□ 0.33
CACNA1A-240ENST00000637432 CCDC60Q8IWA6 550 aaPredicted RBP17.09■□□□□ 0.33
CACNA1A-240ENST00000637432 DNAJC1Q96KC8 554 aaKnown RBP17.09■□□□□ 0.33
CACNA1A-240ENST00000637432 NHEJ1Q9H9Q4 299 aaPredicted RBP17.09■□□□□ 0.33
CACNA1A-240ENST00000637432 CYP26B1Q9NR63 512 aa17.09■□□□□ 0.33
CACNA1A-240ENST00000637432 PCDHA6Q9UN73 950 aa17.09■□□□□ 0.33
CACNA1A-240ENST00000637432 PCDHA8Q9Y5H6 950 aa17.09■□□□□ 0.33
CACNA1A-240ENST00000637432 RNASEH1O60930 286 aaKnown RBP17.09■□□□□ 0.33
CACNA1A-240ENST00000637432 LAMC2Q13753 1193 aa17.09■□□□□ 0.33
CACNA1A-240ENST00000637432 ELAC2Q9BQ52 826 aaKnown RBP17.09■□□□□ 0.33
CACNA1A-240ENST00000637432 PLEKHA5Q9HAU0 1116 aa17.09■□□□□ 0.33
CACNA1A-240ENST00000637432 STAP1Q9ULZ2 295 aa17.09■□□□□ 0.33
CACNA1A-240ENST00000637432 MYH11P35749 1972 aa17.09■□□□□ 0.33
CACNA1A-240ENST00000637432 POLR3AO14802 1390 aaPredicted RBP17.09■□□□□ 0.33
CACNA1A-240ENST00000637432 CYP27B1O15528 508 aa17.09■□□□□ 0.33
CACNA1A-240ENST00000637432 ERN1O75460 977 aaKnown RBP17.09■□□□□ 0.33
CACNA1A-240ENST00000637432 CELF2O95319 508 aaKnown RBP17.09■□□□□ 0.33
CACNA1A-240ENST00000637432 GPC1P35052 558 aa17.09■□□□□ 0.33
CACNA1A-240ENST00000637432 HSD17B4P51659 736 aa17.09■□□□□ 0.33
CACNA1A-240ENST00000637432 MKRN4PQ13434 485 aaPredicted RBP17.09■□□□□ 0.33
Retrieved 100 of 20,778 RNA–protein pairs in 281.4 ms