RNA–Protein interactions for RNA: ENST00000637053.1

VIM-210, Transcript of vimentin, humanhuman

TSL 2

Gene VIM, Length 508 nt, Biotype processed transcript, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
VIM-210ENST00000637053 CYP4A11Q02928 519 aa3.34□□□□□ -1.87
VIM-210ENST00000637053 TNFAIP2Q03169 654 aa3.34□□□□□ -1.87
VIM-210ENST00000637053 AP1B1Q10567 949 aa3.34□□□□□ -1.87
VIM-210ENST00000637053 DUSP4Q13115 394 aa3.34□□□□□ -1.87
VIM-210ENST00000637053 IFIT5Q13325 482 aaKnown RBP3.34□□□□□ -1.87
VIM-210ENST00000637053 SP140Q13342 867 aa3.34□□□□□ -1.87
VIM-210ENST00000637053 PRPF4BQ13523 1007 aaKnown RBP3.34□□□□□ -1.87
VIM-210ENST00000637053 KIR3DS1Q14943 382 aa3.34□□□□□ -1.87
VIM-210ENST00000637053 ODF1Q14990 250 aa3.34□□□□□ -1.87
VIM-210ENST00000637053 ARHGEF6Q15052 776 aa3.34□□□□□ -1.87
VIM-210ENST00000637053 DHCR24Q15392 516 aa3.34□□□□□ -1.87
VIM-210ENST00000637053 SYCP1Q15431 976 aa3.34□□□□□ -1.87
VIM-210ENST00000637053 LONRF2Q1L5Z9 754 aa3.34□□□□□ -1.87
VIM-210ENST00000637053 MMEL1Q495T6 779 aa3.34□□□□□ -1.87
VIM-210ENST00000637053 TMEM240Q5SV17 173 aa3.34□□□□□ -1.87
VIM-210ENST00000637053 LIN54Q6MZP7 749 aa3.34□□□□□ -1.87
VIM-210ENST00000637053 SLC30A6Q6NXT4 461 aa3.34□□□□□ -1.87
VIM-210ENST00000637053 FBXL19Q6PCT2 694 aa3.34□□□□□ -1.87
VIM-210ENST00000637053 PACS1Q6VY07 963 aa3.34□□□□□ -1.87
VIM-210ENST00000637053 FAM47EQ6ZV65 393 aa3.34□□□□□ -1.87
VIM-210ENST00000637053 CHST15Q7LFX5 561 aaPredicted RBP3.34□□□□□ -1.87
VIM-210ENST00000637053 CCDC186Q7Z3E2 898 aa3.34□□□□□ -1.87
VIM-210ENST00000637053 PPP1R42Q7Z4L9 355 aa3.34□□□□□ -1.87
VIM-210ENST00000637053 DNAJB7Q7Z6W7 309 aaPredicted RBP3.34□□□□□ -1.87
VIM-210ENST00000637053 MRPL41Q8IXM3 137 aaKnown RBP3.34□□□□□ -1.87
VIM-210ENST00000637053 COLGALT2Q8IYK4 626 aa3.34□□□□□ -1.87
VIM-210ENST00000637053 LRRC43Q8N309 656 aa3.34□□□□□ -1.87
VIM-210ENST00000637053 PPM1KQ8N3J5 372 aa3.34□□□□□ -1.87
VIM-210ENST00000637053 LRRC71Q8N4P6 559 aa3.34□□□□□ -1.87
VIM-210ENST00000637053 AFAP1Q8N556 730 aa3.34□□□□□ -1.87
VIM-210ENST00000637053 DEPTORQ8TB45 409 aa3.34□□□□□ -1.87
VIM-210ENST00000637053 UTP15Q8TED0 518 aaKnown RBP3.34□□□□□ -1.87
VIM-210ENST00000637053 RUFY2Q8WXA3 655 aa3.34□□□□□ -1.87
VIM-210ENST00000637053 DDX1Q92499 740 aaKnown RBP3.34□□□□□ -1.87
VIM-210ENST00000637053 USP13Q92995 863 aaPredicted RBP3.34□□□□□ -1.87
VIM-210ENST00000637053 FERMT2Q96AC1 680 aa3.34□□□□□ -1.87
VIM-210ENST00000637053 CHFRQ96EP1 664 aa3.34□□□□□ -1.87
VIM-210ENST00000637053 CNDP1Q96KN2 507 aa3.34□□□□□ -1.87
VIM-210ENST00000637053 SPATA17Q96L03 361 aa3.34□□□□□ -1.87
VIM-210ENST00000637053 DHRS1Q96LJ7 313 aa3.34□□□□□ -1.87
VIM-210ENST00000637053 CCDC114Q96M63 670 aa3.34□□□□□ -1.87
VIM-210ENST00000637053 COG8Q96MW5 612 aa3.34□□□□□ -1.87
VIM-210ENST00000637053 TMEM74Q96NL1 305 aa3.34□□□□□ -1.87
VIM-210ENST00000637053 AIFM3Q96NN9 605 aa3.34□□□□□ -1.87
VIM-210ENST00000637053 IPO9Q96P70 1041 aaKnown RBP3.34□□□□□ -1.87
VIM-210ENST00000637053 RBM14Q96PK6 669 aaKnown RBP3.34□□□□□ -1.87
VIM-210ENST00000637053 FAM193BQ96PV7 902 aaPredicted RBP3.34□□□□□ -1.87
VIM-210ENST00000637053 MAP7D2Q96T17 732 aa3.34□□□□□ -1.87
VIM-210ENST00000637053 TREX2Q9BQ50 279 aaPredicted RBP3.34□□□□□ -1.87
VIM-210ENST00000637053 SDF4Q9BRK5 362 aa3.34□□□□□ -1.87
VIM-210ENST00000637053 TTPALQ9BTX7 342 aa3.34□□□□□ -1.87
VIM-210ENST00000637053 UTP14AQ9BVJ6 771 aaKnown RBP3.34□□□□□ -1.87
VIM-210ENST00000637053 MRIQ9BWK5 157 aa3.34□□□□□ -1.87
VIM-210ENST00000637053 SPATA9Q9BWV2 254 aa3.34□□□□□ -1.87
VIM-210ENST00000637053 TEX13BQ9BXU2 312 aa3.34□□□□□ -1.87
VIM-210ENST00000637053 CEP44Q9C0F1 390 aa3.34□□□□□ -1.87
VIM-210ENST00000637053 EHMT1Q9H9B1 1298 aa3.34□□□□□ -1.87
VIM-210ENST00000637053 GRPEL1Q9HAV7 217 aa3.34□□□□□ -1.87
VIM-210ENST00000637053 UBN1Q9NPG3 1134 aa3.34□□□□□ -1.87
VIM-210ENST00000637053 MED4Q9NPJ6 270 aa3.34□□□□□ -1.87
VIM-210ENST00000637053 CRTAC1Q9NQ79 661 aa3.34□□□□□ -1.87
VIM-210ENST00000637053 C1orf112Q9NSG2 853 aa3.34□□□□□ -1.87
VIM-210ENST00000637053 INTS7Q9NVH2 962 aaKnown RBP3.34□□□□□ -1.87
VIM-210ENST00000637053 SMPD4Q9NXE4 827 aa3.34□□□□□ -1.87
VIM-210ENST00000637053 DACT1Q9NYF0 836 aa3.34□□□□□ -1.87
VIM-210ENST00000637053 KLHL14Q9P2G3 628 aa3.34□□□□□ -1.87
VIM-210ENST00000637053 ZNF624Q9P2J8 865 aaPredicted RBP3.34□□□□□ -1.87
VIM-210ENST00000637053 BARX2Q9UMQ3 279 aaPredicted RBP3.34□□□□□ -1.87
VIM-210ENST00000637053 DNM3Q9UQ16 869 aa3.34□□□□□ -1.87
VIM-210ENST00000637053 LRCH1Q9Y2L9 728 aa3.34□□□□□ -1.87
VIM-210ENST00000637053 GOLGA6L10A0A0M3HER8 536 aa3.33□□□□□ -1.88
VIM-210ENST00000637053 A0A1B0GTL3 188 aa3.33□□□□□ -1.88
VIM-210ENST00000637053 A6NNZ2 444 aa3.33□□□□□ -1.88
VIM-210ENST00000637053 A8MVJ9 347 aa3.33□□□□□ -1.88
VIM-210ENST00000637053 LACTBL1A8MY62 500 aa3.33□□□□□ -1.88
VIM-210ENST00000637053 EIF3FO00303 357 aaPredicted RBP3.33□□□□□ -1.88
VIM-210ENST00000637053 TPP1O14773 563 aa3.33□□□□□ -1.88
VIM-210ENST00000637053 ZBTB14O43829 449 aa3.33□□□□□ -1.88
VIM-210ENST00000637053 GREM1O60565 184 aa3.33□□□□□ -1.88
VIM-210ENST00000637053 SOCS5O75159 536 aa3.33□□□□□ -1.88
VIM-210ENST00000637053 STAM2O75886 525 aa3.33□□□□□ -1.88
VIM-210ENST00000637053 DDAH1O94760 285 aa3.33□□□□□ -1.88
VIM-210ENST00000637053 STAMBPO95630 424 aa3.33□□□□□ -1.88
VIM-210ENST00000637053 FGFR1OPO95684 399 aaKnown RBP3.33□□□□□ -1.88
VIM-210ENST00000637053 PAHP00439 452 aa3.33□□□□□ -1.88
VIM-210ENST00000637053 LTFP02788 710 aa3.33□□□□□ -1.88
VIM-210ENST00000637053 MYBL2P10244 700 aa3.33□□□□□ -1.88
VIM-210ENST00000637053 HARSP12081 509 aaKnown RBP3.33□□□□□ -1.88
VIM-210ENST00000637053 ALAS1P13196 640 aa3.33□□□□□ -1.88
VIM-210ENST00000637053 ATP1A3P13637 1013 aa3.33□□□□□ -1.88
VIM-210ENST00000637053 GNAT2P19087 354 aa3.33□□□□□ -1.88
VIM-210ENST00000637053 CCND1P24385 295 aa3.33□□□□□ -1.88
VIM-210ENST00000637053 CCNFP41002 786 aa3.33□□□□□ -1.88
VIM-210ENST00000637053 CRKP46108 304 aa3.33□□□□□ -1.88
VIM-210ENST00000637053 ASMTP46597 345 aa3.33□□□□□ -1.88
VIM-210ENST00000637053 CLCN2P51788 898 aa3.33□□□□□ -1.88
VIM-210ENST00000637053 DRG2P55039 364 aaKnown RBP3.33□□□□□ -1.88
VIM-210ENST00000637053 C21orf58P58505 322 aa3.33□□□□□ -1.88
VIM-210ENST00000637053 IL1RL1Q01638 556 aa3.33□□□□□ -1.88
VIM-210ENST00000637053 FAPQ12884 760 aa3.33□□□□□ -1.88
Retrieved 100 of 20,778 RNA–protein pairs in 17.7 ms