RNA–Protein interactions for RNA: ENST00000636674.1

CLN6-215, Transcript of CLN6, transmembrane ER protein, humanhuman

TSL 5

Gene CLN6, Length 2,005 nt, Biotype retained intron, Subcellular localisation Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CLN6-215ENST00000636674 IWS1Q96ST2 819 aa15.6■□□□□ 0.09
CLN6-215ENST00000636674 NUP85Q9BW27 656 aa15.6■□□□□ 0.09
CLN6-215ENST00000636674 FAM120AQ9NZB2 1118 aaKnown RBP eCLIP15.6■□□□□ 0.096e-12■■■■■ 40.9
CLN6-215ENST00000636674 SAMD15Q9P1V8 674 aa15.6■□□□□ 0.09
CLN6-215ENST00000636674 COQ4Q9Y3A0 265 aa15.6■□□□□ 0.09
CLN6-215ENST00000636674 TCRBV7S2A1N4TA0A589 114 aa15.6■□□□□ 0.09
CLN6-215ENST00000636674 ANKRD63C9JTQ0 380 aa15.6■□□□□ 0.09
CLN6-215ENST00000636674 UBXN2AP68543 259 aa15.6■□□□□ 0.09
CLN6-215ENST00000636674 CNGA2Q16280 664 aa15.6■□□□□ 0.09
CLN6-215ENST00000636674 UBAP2Q5T6F2 1119 aaKnown RBP15.6■□□□□ 0.09
CLN6-215ENST00000636674 CC2D2BQ6DHV5 1058 aa15.6■□□□□ 0.09
CLN6-215ENST00000636674 CCDC174Q6PII3 467 aa15.6■□□□□ 0.09
CLN6-215ENST00000636674 MIGA2Q7L4E1 593 aa15.6■□□□□ 0.09
CLN6-215ENST00000636674 MIER3Q7Z3K6 550 aa15.6■□□□□ 0.09
CLN6-215ENST00000636674 FAM160B2Q86V87 743 aa15.6■□□□□ 0.09
CLN6-215ENST00000636674 FAM228AQ86W67 206 aa15.6■□□□□ 0.09
CLN6-215ENST00000636674 SLC17A8Q8NDX2 589 aa15.6■□□□□ 0.09
CLN6-215ENST00000636674 KAT5Q92993 513 aa15.6■□□□□ 0.09
CLN6-215ENST00000636674 PCIF1Q9H4Z3 704 aa15.6■□□□□ 0.09
CLN6-215ENST00000636674 TDRD3Q9H7E2 651 aaKnown RBP15.6■□□□□ 0.09
CLN6-215ENST00000636674 TPX2Q9ULW0 747 aaKnown RBP15.6■□□□□ 0.09
CLN6-215ENST00000636674 TISP43B9A030 160 aa15.59■□□□□ 0.09
CLN6-215ENST00000636674 FSCN2O14926 492 aa15.59■□□□□ 0.09
CLN6-215ENST00000636674 SPOPO43791 374 aa15.59■□□□□ 0.09
CLN6-215ENST00000636674 OAS1P00973 400 aaKnown RBP15.59■□□□□ 0.09
CLN6-215ENST00000636674 RARRES1P49788 294 aa15.59■□□□□ 0.09
CLN6-215ENST00000636674 HSD17B4P51659 736 aa15.59■□□□□ 0.09
CLN6-215ENST00000636674 MFAP3P55082 362 aa15.59■□□□□ 0.09
CLN6-215ENST00000636674 CDR2Q01850 454 aa15.59■□□□□ 0.09
CLN6-215ENST00000636674 CALCOCO2Q13137 446 aa15.59■□□□□ 0.09
CLN6-215ENST00000636674 RHBDF2Q6PJF5 856 aa15.59■□□□□ 0.09
CLN6-215ENST00000636674 SYDE1Q6ZW31 735 aaPredicted RBP15.59■□□□□ 0.09
CLN6-215ENST00000636674 ACER1Q8TDN7 264 aa15.59■□□□□ 0.09
CLN6-215ENST00000636674 SERPINB12Q96P63 405 aa15.59■□□□□ 0.09
CLN6-215ENST00000636674 PLVAPQ9BX97 442 aa15.59■□□□□ 0.09
CLN6-215ENST00000636674 TP73O15350 636 aa15.58■□□□□ 0.09
CLN6-215ENST00000636674 MAN1A1P33908 653 aa15.58■□□□□ 0.09
CLN6-215ENST00000636674 GPC3P51654 580 aa15.58■□□□□ 0.09
CLN6-215ENST00000636674 NCKAP1LP55160 1127 aa15.58■□□□□ 0.09
CLN6-215ENST00000636674 TGFB2P61812 414 aa15.58■□□□□ 0.09
CLN6-215ENST00000636674 RNF207Q6ZRF8 634 aa15.58■□□□□ 0.09
CLN6-215ENST00000636674 ZNF653Q96CK0 615 aa15.58■□□□□ 0.09
CLN6-215ENST00000636674 PRMT1Q99873 361 aaKnown RBP15.58■□□□□ 0.09
CLN6-215ENST00000636674 HOMER3Q9NSC5 361 aa15.58■□□□□ 0.09
CLN6-215ENST00000636674 ZHX2Q9Y6X8 837 aa15.58■□□□□ 0.09
CLN6-215ENST00000636674 CFAP73A6NFT4 308 aa15.58■□□□□ 0.08
CLN6-215ENST00000636674 DHX15O43143 795 aaKnown RBP15.58■□□□□ 0.08
CLN6-215ENST00000636674 CYP26A1O43174 497 aa15.58■□□□□ 0.08
CLN6-215ENST00000636674 ATMINO43313 823 aaPredicted RBP15.58■□□□□ 0.08
CLN6-215ENST00000636674 C21orf2O43822 256 aa15.58■□□□□ 0.08
CLN6-215ENST00000636674 ADRB2P07550 413 aa15.58■□□□□ 0.08
CLN6-215ENST00000636674 CYP11B1P15538 503 aa15.58■□□□□ 0.08
CLN6-215ENST00000636674 ITGB5P18084 799 aa15.58■□□□□ 0.08
CLN6-215ENST00000636674 ATP5DP30049 168 aa15.58■□□□□ 0.08
CLN6-215ENST00000636674 SLC8A1P32418 973 aa15.58■□□□□ 0.08
CLN6-215ENST00000636674 PDE6CP51160 858 aa15.58■□□□□ 0.08
CLN6-215ENST00000636674 GHRHRQ02643 423 aa15.58■□□□□ 0.08
CLN6-215ENST00000636674 NEDD9Q14511 834 aa15.58■□□□□ 0.08
CLN6-215ENST00000636674 TRPM8Q7Z2W7 1104 aa15.58■□□□□ 0.08
CLN6-215ENST00000636674 HAUS6Q7Z4H7 955 aa15.58■□□□□ 0.08
CLN6-215ENST00000636674 SLC47A2Q86VL8 602 aa15.58■□□□□ 0.08
CLN6-215ENST00000636674 CDC42EP4Q9H3Q1 356 aaKnown RBP15.58■□□□□ 0.08
CLN6-215ENST00000636674 XPO5Q9HAV4 1204 aaKnown RBP eCLIP15.58■□□□□ 0.08
CLN6-215ENST00000636674 AAASQ9NRG9 546 aa15.58■□□□□ 0.08
CLN6-215ENST00000636674 MCM8Q9UJA3 840 aa15.58■□□□□ 0.08
CLN6-215ENST00000636674 SMIM23A6NLE4 172 aa15.57■□□□□ 0.08
CLN6-215ENST00000636674 SNX3O60493 162 aa15.57■□□□□ 0.08
CLN6-215ENST00000636674 TCEA3O75764 348 aa15.57■□□□□ 0.08
CLN6-215ENST00000636674 ELF3P78545 371 aaPredicted RBP15.57■□□□□ 0.08
CLN6-215ENST00000636674 ENPEPQ07075 957 aa15.57■□□□□ 0.08
CLN6-215ENST00000636674 TNIP1Q15025 636 aa15.57■□□□□ 0.08
CLN6-215ENST00000636674 EXOC3L1Q86VI1 746 aa15.57■□□□□ 0.08
CLN6-215ENST00000636674 HELQQ8TDG4 1101 aa15.57■□□□□ 0.08
CLN6-215ENST00000636674 MAIP1Q8WWC4 291 aa15.57■□□□□ 0.08
CLN6-215ENST00000636674 DDX1Q92499 740 aaKnown RBP15.57■□□□□ 0.08
CLN6-215ENST00000636674 ZBTB21Q9ULJ3 1066 aa15.57■□□□□ 0.08
CLN6-215ENST00000636674 ITIH2P19823 946 aa15.56■□□□□ 0.08
CLN6-215ENST00000636674 RIPK1Q13546 671 aa15.56■□□□□ 0.08
CLN6-215ENST00000636674 PTK6Q13882 451 aa15.56■□□□□ 0.08
CLN6-215ENST00000636674 PPP1R7Q15435 360 aa15.56■□□□□ 0.08
CLN6-215ENST00000636674 KRT39Q6A163 491 aa15.56■□□□□ 0.08
CLN6-215ENST00000636674 ACAD10Q6JQN1 1059 aa15.56■□□□□ 0.08
CLN6-215ENST00000636674 LDHDQ86WU2 507 aa15.56■□□□□ 0.08
CLN6-215ENST00000636674 PPM1KQ8N3J5 372 aa15.56■□□□□ 0.08
CLN6-215ENST00000636674 TMEM8AQ9HCN3 771 aa15.56■□□□□ 0.08
CLN6-215ENST00000636674 KCNH7Q9NS40 1196 aa15.56■□□□□ 0.08
CLN6-215ENST00000636674 BCS1LQ9Y276 419 aa15.56■□□□□ 0.08
CLN6-215ENST00000636674 SLCO1A2P46721 670 aa15.56■□□□□ 0.08
CLN6-215ENST00000636674 QARSP47897 775 aaKnown RBP15.56■□□□□ 0.08
CLN6-215ENST00000636674 KCNJ1P48048 391 aa15.56■□□□□ 0.08
CLN6-215ENST00000636674 CAV1Q03135 178 aa15.56■□□□□ 0.08
CLN6-215ENST00000636674 KRT17Q04695 432 aa15.56■□□□□ 0.08
CLN6-215ENST00000636674 CPNE8Q86YQ8 564 aa15.56■□□□□ 0.08
CLN6-215ENST00000636674 ZSWIM2Q8NEG5 633 aa15.56■□□□□ 0.08
CLN6-215ENST00000636674 TMC2Q8TDI7 906 aa15.56■□□□□ 0.08
CLN6-215ENST00000636674 SEMA4DQ92854 862 aa15.56■□□□□ 0.08
CLN6-215ENST00000636674 PRMT6Q96LA8 375 aaPredicted RBP15.56■□□□□ 0.08
CLN6-215ENST00000636674 ELAC2Q9BQ52 826 aaKnown RBP15.56■□□□□ 0.08
CLN6-215ENST00000636674 AVENQ9NQS1 362 aaPredicted RBP15.56■□□□□ 0.08
CLN6-215ENST00000636674 CHORDC1Q9UHD1 332 aaPredicted RBP15.56■□□□□ 0.08
Retrieved 100 of 20,778 RNA–protein pairs in 20.6 ms