RNA–Protein interactions for RNA: ENST00000634926.1

SMARCB1-208, Transcript of SWI/SNF related, matrix associated, actin dependent regulator of chromatin, subfamily b, member 1, human

TSL 1 (best)

Gene SMARCB1, Length 269 nt, Biotype protein coding, Subcellular localisation Cytosol, Exosome, Ribosome .

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RNA		Protein				Prediction (catRAPID)		Interaction (ENCODE eCLIP)
Transcript Symbol	Ensembl Transcript ID	Gene	UniProt Accession	Length	Protein Status	Prediction Score	Prediction z-Score	p-Value	Fold Change
SMARCB1-208	ENST00000634926	OSTM1	Q86WC4	334 aa		3.36	□□□□□ -1.87
SMARCB1-208	ENST00000634926	DCAF4	Q8WV16	495 aa		3.36	□□□□□ -1.87
SMARCB1-208	ENST00000634926	OR10A5	Q9H207	317 aa		3.36	□□□□□ -1.87
SMARCB1-208	ENST00000634926	KLHL42	Q9P2K6	505 aa		3.36	□□□□□ -1.87
SMARCB1-208	ENST00000634926	MAGEC2	Q9UBF1	373 aa	Predicted RBP	3.36	□□□□□ -1.87
SMARCB1-208	ENST00000634926	ATP8A1	Q9Y2Q0	1164 aa		3.36	□□□□□ -1.87
SMARCB1-208	ENST00000634926	EID1	Q9Y6B2	187 aa		3.36	□□□□□ -1.87
SMARCB1-208	ENST00000634926	ADGRB2	O60241	1585 aa		3.36	□□□□□ -1.87
SMARCB1-208	ENST00000634926	LRP5	O75197	1615 aa		3.36	□□□□□ -1.87
SMARCB1-208	ENST00000634926	KIF1A	Q12756	1690 aa		3.36	□□□□□ -1.87
SMARCB1-208	ENST00000634926	PLCH1	Q4KWH8	1693 aa		3.36	□□□□□ -1.87
SMARCB1-208	ENST00000634926	TRPM3	Q9HCF6	1732 aa	Predicted RBP	3.36	□□□□□ -1.87
SMARCB1-208	ENST00000634926	HFM1	A2PYH4	1435 aa		3.36	□□□□□ -1.87
SMARCB1-208	ENST00000634926	NAIP	Q13075	1403 aa		3.36	□□□□□ -1.87
SMARCB1-208	ENST00000634926	NRXN1	Q9ULB1	1477 aa		3.35	□□□□□ -1.87
SMARCB1-208	ENST00000634926	GLI3	P10071	1580 aa		3.35	□□□□□ -1.87
SMARCB1-208	ENST00000634926	USP32	Q8NFA0	1604 aa		3.35	□□□□□ -1.87
SMARCB1-208	ENST00000634926	GSG1L2	A8MUP6	293 aa		3.35	□□□□□ -1.87
SMARCB1-208	ENST00000634926	EFCAB14	O75071	495 aa		3.35	□□□□□ -1.87
SMARCB1-208	ENST00000634926	MME	P08473	750 aa		3.35	□□□□□ -1.87
SMARCB1-208	ENST00000634926	C6orf222	P0C671	652 aa	Predicted RBP	3.35	□□□□□ -1.87
SMARCB1-208	ENST00000634926	ZEB1	P37275	1124 aa	Predicted RBP	3.35	□□□□□ -1.87
SMARCB1-208	ENST00000634926	JAM2	P57087	298 aa		3.35	□□□□□ -1.87
SMARCB1-208	ENST00000634926	GABRE	P78334	506 aa		3.35	□□□□□ -1.87
SMARCB1-208	ENST00000634926	FAM189B	P81408	668 aa		3.35	□□□□□ -1.87
SMARCB1-208	ENST00000634926	GRAMD4	Q6IC98	578 aa		3.35	□□□□□ -1.87
SMARCB1-208	ENST00000634926	LRRTM3	Q86VH5	581 aa		3.35	□□□□□ -1.87
SMARCB1-208	ENST00000634926	MB21D1	Q8N884	522 aa		3.35	□□□□□ -1.87
SMARCB1-208	ENST00000634926	PRPF38A	Q8NAV1	312 aa	Known RBP	3.35	□□□□□ -1.87
SMARCB1-208	ENST00000634926	GSTCD	Q8NEC7	633 aa		3.35	□□□□□ -1.87
SMARCB1-208	ENST00000634926	ATXN2L	Q8WWM7	1075 aa	Known RBP	3.35	□□□□□ -1.87
SMARCB1-208	ENST00000634926	TRIM39	Q9HCM9	518 aa		3.35	□□□□□ -1.87
SMARCB1-208	ENST00000634926	RNF7	Q9UBF6	113 aa		3.35	□□□□□ -1.87
SMARCB1-208	ENST00000634926	SFMBT1	Q9UHJ3	866 aa		3.35	□□□□□ -1.87
SMARCB1-208	ENST00000634926	CBLC	Q9ULV8	474 aa		3.35	□□□□□ -1.87
SMARCB1-208	ENST00000634926	NWD2	Q9ULI1	1742 aa		3.35	□□□□□ -1.87
SMARCB1-208	ENST00000634926	BRWD3	Q6RI45	1802 aa		3.35	□□□□□ -1.87
SMARCB1-208	ENST00000634926	ATRN	O75882	1429 aa		3.35	□□□□□ -1.87
SMARCB1-208	ENST00000634926	SPATA31E1	Q6ZUB1	1445 aa		3.35	□□□□□ -1.87
SMARCB1-208	ENST00000634926	CEP350	Q5VT06	3117 aa		3.35	□□□□□ -1.87
SMARCB1-208	ENST00000634926	ALS2	Q96Q42	1657 aa		3.34	□□□□□ -1.87
SMARCB1-208	ENST00000634926	TNS1	Q9HBL0	1735 aa	Known RBP	3.34	□□□□□ -1.87
SMARCB1-208	ENST00000634926	LOC101059915	A0A1B0GWI6	518 aa	Predicted RBP	3.34	□□□□□ -1.87
SMARCB1-208	ENST00000634926	PRAMEF25	A6NGN4	478 aa		3.34	□□□□□ -1.87
SMARCB1-208	ENST00000634926	RASSF10	A6NK89	507 aa		3.34	□□□□□ -1.87
SMARCB1-208	ENST00000634926	AHRR	A9YTQ3	701 aa		3.34	□□□□□ -1.87
SMARCB1-208	ENST00000634926	FAM47E-STBD1	D6RA91	191 aa		3.34	□□□□□ -1.87
SMARCB1-208	ENST00000634926	DNAJC8	O75937	253 aa	Predicted RBP	3.34	□□□□□ -1.87
SMARCB1-208	ENST00000634926	STC2	O76061	302 aa		3.34	□□□□□ -1.87
SMARCB1-208	ENST00000634926	NPTXR	O95502	500 aa		3.34	□□□□□ -1.87
SMARCB1-208	ENST00000634926	SDS	P20132	328 aa		3.34	□□□□□ -1.87
SMARCB1-208	ENST00000634926	POU3F2	P20265	443 aa	Predicted RBP	3.34	□□□□□ -1.87
SMARCB1-208	ENST00000634926	PLA2G5	P39877	138 aa		3.34	□□□□□ -1.87
SMARCB1-208	ENST00000634926	ANTXR2	P58335	489 aa		3.34	□□□□□ -1.87
SMARCB1-208	ENST00000634926	FOXF2	Q12947	444 aa		3.34	□□□□□ -1.87
SMARCB1-208	ENST00000634926	FOXI1	Q12951	378 aa		3.34	□□□□□ -1.87
SMARCB1-208	ENST00000634926	CT47A1	Q5JQC4	288 aa	Predicted RBP	3.34	□□□□□ -1.87
SMARCB1-208	ENST00000634926	STYK1	Q6J9G0	422 aa		3.34	□□□□□ -1.87
SMARCB1-208	ENST00000634926	MICALCL	Q6ZW33	695 aa		3.34	□□□□□ -1.87
SMARCB1-208	ENST00000634926	AHI1	Q8N157	1196 aa		3.34	□□□□□ -1.87
SMARCB1-208	ENST00000634926	PPM1K	Q8N3J5	372 aa		3.34	□□□□□ -1.87
SMARCB1-208	ENST00000634926	AFAP1L2	Q8N4X5	818 aa		3.34	□□□□□ -1.87
SMARCB1-208	ENST00000634926	ANKRD53	Q8N9V6	530 aa		3.34	□□□□□ -1.87
SMARCB1-208	ENST00000634926	SCARB1	Q8WTV0	552 aa		3.34	□□□□□ -1.87
SMARCB1-208	ENST00000634926	PTPRN2	Q92932	1015 aa		3.34	□□□□□ -1.87
SMARCB1-208	ENST00000634926	TARS2	Q9BW92	718 aa	Known RBP	3.34	□□□□□ -1.87
SMARCB1-208	ENST00000634926	FAM126A	Q9BYI3	521 aa	Predicted RBP	3.34	□□□□□ -1.87
SMARCB1-208	ENST00000634926	RSAD1	Q9HA92	442 aa		3.34	□□□□□ -1.87
SMARCB1-208	ENST00000634926	SLC52A2	Q9HAB3	445 aa		3.34	□□□□□ -1.87
SMARCB1-208	ENST00000634926	HOMER2	Q9NSB8	354 aa		3.34	□□□□□ -1.87
SMARCB1-208	ENST00000634926	SYBU	Q9NX95	663 aa		3.34	□□□□□ -1.87
SMARCB1-208	ENST00000634926	ANKFY1	Q9P2R3	1169 aa		3.34	□□□□□ -1.87
SMARCB1-208	ENST00000634926	MCM8	Q9UJA3	840 aa		3.34	□□□□□ -1.87
SMARCB1-208	ENST00000634926	TRAF6	Q9Y4K3	522 aa		3.34	□□□□□ -1.87
SMARCB1-208	ENST00000634926	ATP23	Q9Y6H3	246 aa		3.34	□□□□□ -1.87
SMARCB1-208	ENST00000634926	EPN1	Q9Y6I3	576 aa	Predicted RBP	3.34	□□□□□ -1.87
SMARCB1-208	ENST00000634926	PIK3C2G	O75747	1445 aa		3.34	□□□□□ -1.88
SMARCB1-208	ENST00000634926	BCL9L	Q86UU0	1499 aa		3.34	□□□□□ -1.88
SMARCB1-208	ENST00000634926	SLIT2	O94813	1529 aa		3.34	□□□□□ -1.88
SMARCB1-208	ENST00000634926	ADGRB1	O14514	1584 aa		3.34	□□□□□ -1.88
SMARCB1-208	ENST00000634926	THSD7A	Q9UPZ6	1657 aa		3.33	□□□□□ -1.88
SMARCB1-208	ENST00000634926	FAM83G	A6ND36	823 aa		3.33	□□□□□ -1.88
SMARCB1-208	ENST00000634926	MYADML2	A6NDP7	307 aa		3.33	□□□□□ -1.88
SMARCB1-208	ENST00000634926	ALG1L2	C9J202	215 aa		3.33	□□□□□ -1.88
SMARCB1-208	ENST00000634926	PARN	O95453	639 aa	Known RBP	3.33	□□□□□ -1.88
SMARCB1-208	ENST00000634926	S100B	P04271	92 aa	Predicted RBP	3.33	□□□□□ -1.88
SMARCB1-208	ENST00000634926	ASL	P04424	464 aa		3.33	□□□□□ -1.88
SMARCB1-208	ENST00000634926	KRT15	P19012	456 aa		3.33	□□□□□ -1.88
SMARCB1-208	ENST00000634926	CDKN1C	P49918	316 aa	Predicted RBP	3.33	□□□□□ -1.88
SMARCB1-208	ENST00000634926	SMAD3	P84022	425 aa	Known RBP	3.33	□□□□□ -1.88
SMARCB1-208	ENST00000634926	EXOSC10	Q01780	885 aa	Known RBP	3.33	□□□□□ -1.88
SMARCB1-208	ENST00000634926	GPR19	Q15760	415 aa		3.33	□□□□□ -1.88
SMARCB1-208	ENST00000634926	CCDC181	Q5TID7	509 aa		3.33	□□□□□ -1.88
SMARCB1-208	ENST00000634926	CNNM4	Q6P4Q7	775 aa		3.33	□□□□□ -1.88
SMARCB1-208	ENST00000634926	MAMDC2	Q7Z304	686 aa	Predicted RBP	3.33	□□□□□ -1.88
SMARCB1-208	ENST00000634926	BRAP	Q7Z569	592 aa		3.33	□□□□□ -1.88
SMARCB1-208	ENST00000634926	DDX42	Q86XP3	938 aa	Known RBP eCLIP	3.33	□□□□□ -1.88
SMARCB1-208	ENST00000634926	IFNL3	Q8IZI9	196 aa		3.33	□□□□□ -1.88
SMARCB1-208	ENST00000634926	SYNE4	Q8N205	404 aa		3.33	□□□□□ -1.88
SMARCB1-208	ENST00000634926	ABCF1	Q8NE71	845 aa	Known RBP eCLIP	3.33	□□□□□ -1.88

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