RNA–Protein interactions for RNA: ENST00000633371.1

PHACTR4-209, Transcript of phosphatase and actin regulator 4, humanhuman

TSL 3

Gene PHACTR4, Length 597 nt, Biotype processed transcript, Subcellular localisation Cytoplasm, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
PHACTR4-209ENST00000633371 FRMD4BQ9Y2L6 1034 aa15.48■□□□□ 0.07
PHACTR4-209ENST00000633371 TRIM43BA6NCK2 446 aa15.47■□□□□ 0.07
PHACTR4-209ENST00000633371 PITPNM1O00562 1244 aa15.47■□□□□ 0.07
PHACTR4-209ENST00000633371 TRIM49P0CI25 452 aa15.47■□□□□ 0.07
PHACTR4-209ENST00000633371 TRIM49CP0CI26 452 aa15.47■□□□□ 0.07
PHACTR4-209ENST00000633371 ITGB8P26012 769 aa15.47■□□□□ 0.07
PHACTR4-209ENST00000633371 CYP2C18P33260 490 aa15.47■□□□□ 0.07
PHACTR4-209ENST00000633371 MATR3P43243 847 aaKnown RBP eCLIP15.47■□□□□ 0.073e-7■□□□□ 8.1
PHACTR4-209ENST00000633371 PPP3CAQ08209 521 aa15.47■□□□□ 0.07
PHACTR4-209ENST00000633371 BFSP1Q12934 665 aa15.47■□□□□ 0.07
PHACTR4-209ENST00000633371 NFX1Q12986 1120 aaKnown RBP15.47■□□□□ 0.07
PHACTR4-209ENST00000633371 ENOX2Q16206 610 aaKnown RBP15.47■□□□□ 0.07
PHACTR4-209ENST00000633371 VWA3BQ502W6 1294 aa15.47■□□□□ 0.07
PHACTR4-209ENST00000633371 SCARA3Q6AZY7 606 aa15.47■□□□□ 0.07
PHACTR4-209ENST00000633371 DPY19L2P1Q6NXN4 242 aa15.47■□□□□ 0.07
PHACTR4-209ENST00000633371 NOTUMQ6P988 496 aa15.47■□□□□ 0.07
PHACTR4-209ENST00000633371 SLC27A1Q6PCB7 646 aa15.47■□□□□ 0.07
PHACTR4-209ENST00000633371 BRSK2Q8IWQ3 736 aa15.47■□□□□ 0.07
PHACTR4-209ENST00000633371 SMG8Q8ND04 991 aaKnown RBP15.47■□□□□ 0.07
PHACTR4-209ENST00000633371 TMC2Q8TDI7 906 aa15.47■□□□□ 0.07
PHACTR4-209ENST00000633371 TRIM43Q96BQ3 446 aaPredicted RBP15.47■□□□□ 0.07
PHACTR4-209ENST00000633371 POP1Q99575 1024 aaKnown RBP15.47■□□□□ 0.07
PHACTR4-209ENST00000633371 KIAA1586Q9HCI6 787 aa15.47■□□□□ 0.07
PHACTR4-209ENST00000633371 TOPORSQ9NS56 1045 aaPredicted RBP15.47■□□□□ 0.07
PHACTR4-209ENST00000633371 PIN4Q9Y237 131 aaKnown RBP15.47■□□□□ 0.07
PHACTR4-209ENST00000633371 PTPRJQ12913 1337 aa15.46■□□□□ 0.07
PHACTR4-209ENST00000633371 ZNF233A6NK53 670 aa15.46■□□□□ 0.07
PHACTR4-209ENST00000633371 LRRIQ3A6PVS8 624 aaPredicted RBP15.46■□□□□ 0.07
PHACTR4-209ENST00000633371 LDHAP00338 332 aaKnown RBP15.46■□□□□ 0.07
PHACTR4-209ENST00000633371 STAG3L1P0CL83 205 aa15.46■□□□□ 0.07
PHACTR4-209ENST00000633371 PRKCSHP14314 528 aaPredicted RBP15.46■□□□□ 0.07
PHACTR4-209ENST00000633371 GRM5P41594 1212 aa15.46■□□□□ 0.07
PHACTR4-209ENST00000633371 VAMP7P51809 220 aa15.46■□□□□ 0.07
PHACTR4-209ENST00000633371 OSTNP61366 133 aa15.46■□□□□ 0.07
PHACTR4-209ENST00000633371 CLDN10P78369 228 aa15.46■□□□□ 0.07
PHACTR4-209ENST00000633371 KCNH2Q12809 1159 aa15.46■□□□□ 0.07
PHACTR4-209ENST00000633371 PSMD6Q15008 389 aa15.46■□□□□ 0.07
PHACTR4-209ENST00000633371 TMEM132AQ24JP5 1023 aa15.46■□□□□ 0.07
PHACTR4-209ENST00000633371 SLC10A6Q3KNW5 377 aa15.46■□□□□ 0.07
PHACTR4-209ENST00000633371 TMEM130Q8N3G9 435 aa15.46■□□□□ 0.07
PHACTR4-209ENST00000633371 MRFAP1L1Q96HT8 127 aa15.46■□□□□ 0.07
PHACTR4-209ENST00000633371 SCLYQ96I15 445 aa15.46■□□□□ 0.07
PHACTR4-209ENST00000633371 RNF39Q9H2S5 420 aa15.46■□□□□ 0.07
PHACTR4-209ENST00000633371 NDST4Q9H3R1 872 aa15.46■□□□□ 0.07
PHACTR4-209ENST00000633371 HIPK3Q9H422 1215 aa15.46■□□□□ 0.07
PHACTR4-209ENST00000633371 NXF3Q9H4D5 531 aaKnown RBP15.46■□□□□ 0.07
PHACTR4-209ENST00000633371 PDE11AQ9HCR9 933 aa15.46■□□□□ 0.07
PHACTR4-209ENST00000633371 HES2Q9Y543 173 aa15.46■□□□□ 0.07
PHACTR4-209ENST00000633371 UTP18Q9Y5J1 556 aaKnown RBP eCLIP15.46■□□□□ 0.07
PHACTR4-209ENST00000633371 LTBP2Q14767 1821 aa15.45■□□□□ 0.06
PHACTR4-209ENST00000633371 TTC3P53804 2025 aa15.45■□□□□ 0.06
PHACTR4-209ENST00000633371 GPR182O15218 404 aa15.45■□□□□ 0.06
PHACTR4-209ENST00000633371 CLTBP09497 229 aa15.45■□□□□ 0.06
PHACTR4-209ENST00000633371 CCL23P55773 120 aa15.45■□□□□ 0.06
PHACTR4-209ENST00000633371 ENPEPQ07075 957 aa15.45■□□□□ 0.06
PHACTR4-209ENST00000633371 KCNMA1Q12791 1236 aa15.45■□□□□ 0.06
PHACTR4-209ENST00000633371 PAK2Q13177 524 aa15.45■□□□□ 0.06
PHACTR4-209ENST00000633371 DCAF4L1Q3SXM0 396 aa15.45■□□□□ 0.06
PHACTR4-209ENST00000633371 INTS8Q75QN2 995 aaKnown RBP15.45■□□□□ 0.06
PHACTR4-209ENST00000633371 USP38Q8NB14 1042 aa15.45■□□□□ 0.06
PHACTR4-209ENST00000633371 CCDC51Q96ER9 411 aa15.45■□□□□ 0.06
PHACTR4-209ENST00000633371 PDLIM2Q96JY6 352 aa15.45■□□□□ 0.06
PHACTR4-209ENST00000633371 PPP1R12CQ9BZL4 782 aa15.45■□□□□ 0.06
PHACTR4-209ENST00000633371 CHST12Q9NRB3 414 aa15.45■□□□□ 0.06
PHACTR4-209ENST00000633371 RBAKQ9NYW8 714 aaPredicted RBP15.45■□□□□ 0.06
PHACTR4-209ENST00000633371 SIK3Q9Y2K2 1263 aa15.45■□□□□ 0.06
PHACTR4-209ENST00000633371 TTC26A0AVF1 554 aa15.44■□□□□ 0.06
PHACTR4-209ENST00000633371 MEIS3P2A8K0S8 358 aa15.44■□□□□ 0.06
PHACTR4-209ENST00000633371 LACTBL1A8MY62 500 aa15.44■□□□□ 0.06
PHACTR4-209ENST00000633371 KIAA0355O15063 1070 aa15.44■□□□□ 0.06
PHACTR4-209ENST00000633371 LRRN2O75325 713 aa15.44■□□□□ 0.06
PHACTR4-209ENST00000633371 CXCL10P02778 98 aa15.44■□□□□ 0.06
PHACTR4-209ENST00000633371 CLTAP09496 248 aa15.44■□□□□ 0.06
PHACTR4-209ENST00000633371 CXCL8P10145 99 aa15.44■□□□□ 0.06
PHACTR4-209ENST00000633371 ATF7P17544 494 aaPredicted RBP15.44■□□□□ 0.06
PHACTR4-209ENST00000633371 KLK7P49862 253 aa15.44■□□□□ 0.06
PHACTR4-209ENST00000633371 CBWD6Q4V339 395 aa15.44■□□□□ 0.06
PHACTR4-209ENST00000633371 PLEKHG4Q58EX7 1191 aa15.44■□□□□ 0.06
PHACTR4-209ENST00000633371 CBWD3Q5JTY5 395 aa15.44■□□□□ 0.06
PHACTR4-209ENST00000633371 CBWD5Q5RIA9 395 aa15.44■□□□□ 0.06
PHACTR4-209ENST00000633371 LMBRD2Q68DH5 695 aaPredicted RBP15.44■□□□□ 0.06
PHACTR4-209ENST00000633371 ALKAL1Q6UXT8 129 aa15.44■□□□□ 0.06
PHACTR4-209ENST00000633371 C15orf39Q6ZRI6 1047 aa15.44■□□□□ 0.06
PHACTR4-209ENST00000633371 MRPL10Q7Z7H8 261 aaKnown RBP15.44■□□□□ 0.06
PHACTR4-209ENST00000633371 VSTM4Q8IW00 320 aa15.44■□□□□ 0.06
PHACTR4-209ENST00000633371 CCDC127Q96BQ5 260 aa15.44■□□□□ 0.06
PHACTR4-209ENST00000633371 TMEM39AQ9NV64 488 aa15.44■□□□□ 0.06
PHACTR4-209ENST00000633371 SNTG2Q9NY99 539 aa15.44■□□□□ 0.06
PHACTR4-209ENST00000633371 TDRD15B5MCY1 1934 aaKnown RBP15.44■□□□□ 0.06
PHACTR4-209ENST00000633371 SCN1AP35498 2009 aa15.44■□□□□ 0.06
PHACTR4-209ENST00000633371 PTPRSQ13332 1948 aa15.43■□□□□ 0.06
PHACTR4-209ENST00000633371 CBFA2T2O43439 604 aa15.43■□□□□ 0.06
PHACTR4-209ENST00000633371 AFPP02771 609 aaKnown RBP15.43■□□□□ 0.06
PHACTR4-209ENST00000633371 KRT13P13646 458 aa15.43■□□□□ 0.06
PHACTR4-209ENST00000633371 CDC25BP30305 580 aa15.43■□□□□ 0.06
PHACTR4-209ENST00000633371 FMO5P49326 533 aa15.43■□□□□ 0.06
PHACTR4-209ENST00000633371 POU5F1Q01860 360 aaKnown RBP15.43■□□□□ 0.06
PHACTR4-209ENST00000633371 UBXN1Q04323 297 aa15.43■□□□□ 0.06
PHACTR4-209ENST00000633371 PPP2R3AQ06190 1150 aa15.43■□□□□ 0.06
PHACTR4-209ENST00000633371 NCBP1Q09161 790 aaKnown RBP15.43■□□□□ 0.06
Retrieved 100 of 20,778 RNA–protein pairs in 13.4 ms