RNA–Protein interactions for RNA: ENST00000629036.2

DDX41-219, Transcript of DEAD-box helicase 41, humanhuman

TSL 4 BASIC

Gene DDX41, Length 606 nt, Biotype protein coding, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
DDX41-219ENST00000629036 PANK2Q9BZ23 570 aa12.2□□□□□ -0.46
DDX41-219ENST00000629036 SNTG2Q9NY99 539 aa12.2□□□□□ -0.46
DDX41-219ENST00000629036 CFAP45Q9UL16 551 aa12.2□□□□□ -0.46
DDX41-219ENST00000629036 USP34Q70CQ2 3546 aa12.2□□□□□ -0.46
DDX41-219ENST00000629036 PPAN-P2RY11A0A0B4J1V8 794 aaPredicted RBP12.19□□□□□ -0.46
DDX41-219ENST00000629036 NT5C1B-RDH14C9J2C7 533 aa12.19□□□□□ -0.46
DDX41-219ENST00000629036 ACTN4O43707 911 aaKnown RBP12.19□□□□□ -0.46
DDX41-219ENST00000629036 ZC3H11AO75152 810 aaKnown RBP eCLIP12.19□□□□□ -0.46
DDX41-219ENST00000629036 FAM13AO94988 1023 aa12.19□□□□□ -0.46
DDX41-219ENST00000629036 POMCP01189 267 aa12.19□□□□□ -0.46
DDX41-219ENST00000629036 LIG1P18858 919 aa12.19□□□□□ -0.46
DDX41-219ENST00000629036 GTF2F1P35269 517 aaKnown RBP eCLIP12.19□□□□□ -0.46
DDX41-219ENST00000629036 LTBRP36941 435 aa12.19□□□□□ -0.46
DDX41-219ENST00000629036 TXLNAP40222 546 aa12.19□□□□□ -0.46
DDX41-219ENST00000629036 GRM5P41594 1212 aa12.19□□□□□ -0.46
DDX41-219ENST00000629036 CASP5P51878 434 aa12.19□□□□□ -0.46
DDX41-219ENST00000629036 MCL1Q07820 350 aa12.19□□□□□ -0.46
DDX41-219ENST00000629036 KCNC3Q14003 757 aa12.19□□□□□ -0.46
DDX41-219ENST00000629036 MPZL3Q6UWV2 235 aa12.19□□□□□ -0.46
DDX41-219ENST00000629036 ZPBP2Q6X784 338 aa12.19□□□□□ -0.46
DDX41-219ENST00000629036 DYMQ7RTS9 669 aa12.19□□□□□ -0.46
DDX41-219ENST00000629036 MAP4K3Q8IVH8 894 aa12.19□□□□□ -0.46
DDX41-219ENST00000629036 GLIS3Q8NEA6 775 aa12.19□□□□□ -0.46
DDX41-219ENST00000629036 VN1R2Q8NFZ6 395 aa12.19□□□□□ -0.46
DDX41-219ENST00000629036 RASSF8Q8NHQ8 419 aa12.19□□□□□ -0.46
DDX41-219ENST00000629036 MRPS27Q92552 414 aaKnown RBP12.19□□□□□ -0.46
DDX41-219ENST00000629036 STAMQ92783 540 aa12.19□□□□□ -0.46
DDX41-219ENST00000629036 IGSF21Q96ID5 467 aa12.19□□□□□ -0.46
DDX41-219ENST00000629036 PAAF1Q9BRP4 392 aa12.19□□□□□ -0.46
DDX41-219ENST00000629036 TMEM175Q9BSA9 504 aa12.19□□□□□ -0.46
DDX41-219ENST00000629036 APOL6Q9BWW8 343 aa12.19□□□□□ -0.46
DDX41-219ENST00000629036 TRIM9Q9C026 710 aa12.19□□□□□ -0.46
DDX41-219ENST00000629036 TNMDQ9H2S6 317 aa12.19□□□□□ -0.46
DDX41-219ENST00000629036 NSUN3Q9H649 340 aaKnown RBP12.19□□□□□ -0.46
DDX41-219ENST00000629036 UBN1Q9NPG3 1134 aa12.19□□□□□ -0.46
DDX41-219ENST00000629036 OLFML3Q9NRN5 406 aa12.19□□□□□ -0.46
DDX41-219ENST00000629036 KLK14Q9P0G3 267 aa12.19□□□□□ -0.46
DDX41-219ENST00000629036 LARSQ9P2J5 1176 aaKnown RBP12.19□□□□□ -0.46
DDX41-219ENST00000629036 CACNG4Q9UBN1 327 aa12.19□□□□□ -0.46
DDX41-219ENST00000629036 TBX20Q9UMR3 447 aa12.19□□□□□ -0.46
DDX41-219ENST00000629036 PCDHB12Q9Y5F1 795 aa12.19□□□□□ -0.46
DDX41-219ENST00000629036 DOCK6Q96HP0 2047 aa12.19□□□□□ -0.46
DDX41-219ENST00000629036 TISP43B9A030 160 aa12.18□□□□□ -0.46
DDX41-219ENST00000629036 K7ENM7 598 aa12.18□□□□□ -0.46
DDX41-219ENST00000629036 TRAK2O60296 914 aa12.18□□□□□ -0.46
DDX41-219ENST00000629036 TOM1L1O75674 476 aa12.18□□□□□ -0.46
DDX41-219ENST00000629036 GLP2RO95838 553 aa12.18□□□□□ -0.46
DDX41-219ENST00000629036 MCF2P10911 925 aa12.18□□□□□ -0.46
DDX41-219ENST00000629036 IGFBP6P24592 240 aaPredicted RBP12.18□□□□□ -0.46
DDX41-219ENST00000629036 PPM1AP35813 382 aa12.18□□□□□ -0.46
DDX41-219ENST00000629036 ME1P48163 572 aa12.18□□□□□ -0.46
DDX41-219ENST00000629036 KRT85P78386 507 aa12.18□□□□□ -0.46
DDX41-219ENST00000629036 NCBP1Q09161 790 aaKnown RBP12.18□□□□□ -0.46
DDX41-219ENST00000629036 KCNA1Q09470 495 aa12.18□□□□□ -0.46
DDX41-219ENST00000629036 GRIK3Q13003 919 aa12.18□□□□□ -0.46
DDX41-219ENST00000629036 PTPROQ16827 1216 aa12.18□□□□□ -0.46
DDX41-219ENST00000629036 ZNF568Q3ZCX4 644 aa12.18□□□□□ -0.46
DDX41-219ENST00000629036 ZC2HC1CQ53FD0 456 aaPredicted RBP12.18□□□□□ -0.46
DDX41-219ENST00000629036 ZBTB41Q5SVQ8 909 aa12.18□□□□□ -0.46
DDX41-219ENST00000629036 SV2BQ7L1I2 683 aa12.18□□□□□ -0.46
DDX41-219ENST00000629036 ZNF720Q7Z2F6 126 aa12.18□□□□□ -0.46
DDX41-219ENST00000629036 FAM178BQ8IXR5 827 aa12.18□□□□□ -0.46
DDX41-219ENST00000629036 THNSL1Q8IYQ7 743 aa12.18□□□□□ -0.46
DDX41-219ENST00000629036 MYCT1Q8N699 235 aa12.18□□□□□ -0.46
DDX41-219ENST00000629036 URGCPQ8TCY9 931 aa12.18□□□□□ -0.46
DDX41-219ENST00000629036 DHX58Q96C10 678 aa12.18□□□□□ -0.46
DDX41-219ENST00000629036 PPP1R10Q96QC0 940 aaKnown RBP12.18□□□□□ -0.46
DDX41-219ENST00000629036 PHOX2BQ99453 314 aa12.18□□□□□ -0.46
DDX41-219ENST00000629036 TRIM6Q9C030 488 aaPredicted RBP12.18□□□□□ -0.46
DDX41-219ENST00000629036 ZBP1Q9H171 429 aa12.18□□□□□ -0.46
DDX41-219ENST00000629036 CUEDC2Q9H467 287 aa12.18□□□□□ -0.46
DDX41-219ENST00000629036 GOLPH3LQ9H4A5 285 aa12.18□□□□□ -0.46
DDX41-219ENST00000629036 TLR9Q9NR96 1032 aa12.18□□□□□ -0.46
DDX41-219ENST00000629036 AAASQ9NRG9 546 aa12.18□□□□□ -0.46
DDX41-219ENST00000629036 SPG21Q9NZD8 308 aa12.18□□□□□ -0.46
DDX41-219ENST00000629036 HIDE1A8MVS5 230 aa12.17□□□□□ -0.46
DDX41-219ENST00000629036 ANKRD63C9JTQ0 380 aa12.17□□□□□ -0.46
DDX41-219ENST00000629036 POLR2DO15514 142 aaKnown RBP12.17□□□□□ -0.46
DDX41-219ENST00000629036 LINC01565O15544 149 aa12.17□□□□□ -0.46
DDX41-219ENST00000629036 TBX10O75333 385 aa12.17□□□□□ -0.46
DDX41-219ENST00000629036 TBCAO75347 108 aaKnown RBP12.17□□□□□ -0.46
DDX41-219ENST00000629036 ADRB2P07550 413 aa12.17□□□□□ -0.46
DDX41-219ENST00000629036 PFKFB1P16118 471 aa12.17□□□□□ -0.46
DDX41-219ENST00000629036 SCP2P22307 547 aa12.17□□□□□ -0.46
DDX41-219ENST00000629036 CMA1P23946 247 aa12.17□□□□□ -0.46
DDX41-219ENST00000629036 CASP1P29466 404 aa12.17□□□□□ -0.46
DDX41-219ENST00000629036 HOXD13P35453 343 aa12.17□□□□□ -0.46
DDX41-219ENST00000629036 SMTNP53814 917 aa12.17□□□□□ -0.46
DDX41-219ENST00000629036 SOX4Q06945 474 aaPredicted RBP12.17□□□□□ -0.46
DDX41-219ENST00000629036 DLX2Q07687 328 aaPredicted RBP12.17□□□□□ -0.46
DDX41-219ENST00000629036 COASYQ13057 564 aa12.17□□□□□ -0.46
DDX41-219ENST00000629036 NOLC1Q14978 699 aaKnown RBP eCLIP12.17□□□□□ -0.46
DDX41-219ENST00000629036 SPOUT1Q5T280 376 aaKnown RBP12.17□□□□□ -0.46
DDX41-219ENST00000629036 ADALQ6DHV7 355 aa12.17□□□□□ -0.46
DDX41-219ENST00000629036 CD300LGQ6UXG3 332 aa12.17□□□□□ -0.46
DDX41-219ENST00000629036 HPS3Q969F9 1004 aa12.17□□□□□ -0.46
DDX41-219ENST00000629036 SPATA32Q96LK8 384 aa12.17□□□□□ -0.46
DDX41-219ENST00000629036 ZMAT2Q96NC0 199 aaKnown RBP12.17□□□□□ -0.46
DDX41-219ENST00000629036 C7orf25Q9BPX7 421 aa12.17□□□□□ -0.46
DDX41-219ENST00000629036 ADPGKQ9BRR6 497 aa12.17□□□□□ -0.46
Retrieved 100 of 20,778 RNA–protein pairs in 36.4 ms