RNA–Protein interactions for RNA: ENST00000628391.1

TCF4-264, Transcript of transcription factor 4, humanhuman

TSL 1 (best)

Gene TCF4, Length 201 nt, Biotype processed transcript, Subcellular localisation Cytosol, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
TCF4-264ENST00000628391 SNX25Q9H3E2 840 aa2.04□□□□□ -2.08
TCF4-264ENST00000628391 SERHL2Q9H4I8 314 aa2.04□□□□□ -2.08
TCF4-264ENST00000628391 Q9H521 79 aa2.04□□□□□ -2.08
TCF4-264ENST00000628391 DENND2DQ9H6A0 471 aaPredicted RBP2.04□□□□□ -2.08
TCF4-264ENST00000628391 TUT1Q9H6E5 874 aaKnown RBP2.04□□□□□ -2.08
TCF4-264ENST00000628391 RUBCNLQ9H714 662 aa2.04□□□□□ -2.08
TCF4-264ENST00000628391 ZNF696Q9H7X3 374 aa2.04□□□□□ -2.08
TCF4-264ENST00000628391 PHAXQ9H814 394 aaKnown RBP2.04□□□□□ -2.08
TCF4-264ENST00000628391 C10orf88Q9H8K7 445 aa2.04□□□□□ -2.08
TCF4-264ENST00000628391 EHMT1Q9H9B1 1298 aa2.04□□□□□ -2.08
TCF4-264ENST00000628391 EPB41L5Q9HCM4 733 aa2.04□□□□□ -2.08
TCF4-264ENST00000628391 XAB2Q9HCS7 855 aaKnown RBP2.04□□□□□ -2.08
TCF4-264ENST00000628391 CD209Q9NNX6 404 aa2.04□□□□□ -2.08
TCF4-264ENST00000628391 CYLDQ9NQC7 956 aa2.04□□□□□ -2.08
TCF4-264ENST00000628391 CCDC177Q9NQR7 707 aaPredicted RBP2.04□□□□□ -2.08
TCF4-264ENST00000628391 GPHNQ9NQX3 736 aaPredicted RBP2.04□□□□□ -2.08
TCF4-264ENST00000628391 RBM12Q9NTZ6 932 aaKnown RBP2.04□□□□□ -2.08
TCF4-264ENST00000628391 TRNAU1APQ9NX07 287 aaKnown RBP2.04□□□□□ -2.08
TCF4-264ENST00000628391 NDE1Q9NXR1 346 aa2.04□□□□□ -2.08
TCF4-264ENST00000628391 DDX56Q9NY93 547 aaKnown RBP2.04□□□□□ -2.08
TCF4-264ENST00000628391 MAP3K20Q9NYL2 800 aaKnown RBP2.04□□□□□ -2.08
TCF4-264ENST00000628391 FMN2Q9NZ56 1722 aa2.04□□□□□ -2.08
TCF4-264ENST00000628391 GMIPQ9P107 970 aa2.04□□□□□ -2.08
TCF4-264ENST00000628391 ZNFX1Q9P2E3 1918 aaKnown RBP2.04□□□□□ -2.08
TCF4-264ENST00000628391 KLHL14Q9P2G3 628 aa2.04□□□□□ -2.08
TCF4-264ENST00000628391 EPS15L1Q9UBC2 864 aa2.04□□□□□ -2.08
TCF4-264ENST00000628391 MRC2Q9UBG0 1479 aa2.04□□□□□ -2.08
TCF4-264ENST00000628391 TNFRSF10DQ9UBN6 386 aa2.04□□□□□ -2.08
TCF4-264ENST00000628391 ADD3Q9UEY8 706 aaKnown RBP2.04□□□□□ -2.08
TCF4-264ENST00000628391 ZRANB1Q9UGI0 708 aa2.04□□□□□ -2.08
TCF4-264ENST00000628391 PRKAG3Q9UGI9 489 aa2.04□□□□□ -2.08
TCF4-264ENST00000628391 HMGXB4Q9UGU5 601 aa2.04□□□□□ -2.08
TCF4-264ENST00000628391 LIMA1Q9UHB6 759 aaKnown RBP2.04□□□□□ -2.08
TCF4-264ENST00000628391 FAM153AQ9UHL3 310 aa2.04□□□□□ -2.08
TCF4-264ENST00000628391 MAN1B1Q9UKM7 699 aa2.04□□□□□ -2.08
TCF4-264ENST00000628391 PNMA3Q9UL41 463 aa2.04□□□□□ -2.08
TCF4-264ENST00000628391 MYO5BQ9ULV0 1848 aa2.04□□□□□ -2.08
TCF4-264ENST00000628391 PADI4Q9UM07 663 aa2.04□□□□□ -2.08
TCF4-264ENST00000628391 ALKQ9UM73 1620 aa2.04□□□□□ -2.08
TCF4-264ENST00000628391 APOBEC2Q9Y235 224 aaKnown RBP2.04□□□□□ -2.08
TCF4-264ENST00000628391 LZTS1Q9Y250 596 aa2.04□□□□□ -2.08
TCF4-264ENST00000628391 CFL2Q9Y281 166 aa2.04□□□□□ -2.08
TCF4-264ENST00000628391 IFT52Q9Y366 437 aa2.04□□□□□ -2.08
TCF4-264ENST00000628391 UTP11Q9Y3A2 253 aaKnown RBP2.04□□□□□ -2.08
TCF4-264ENST00000628391 ANGPTL3Q9Y5C1 460 aa2.04□□□□□ -2.08
TCF4-264ENST00000628391 PCDHB6Q9Y5E3 794 aa2.04□□□□□ -2.08
TCF4-264ENST00000628391 PCDHGA11Q9Y5H2 935 aa2.04□□□□□ -2.08
TCF4-264ENST00000628391 RBM8AQ9Y5S9 174 aaKnown RBP2.04□□□□□ -2.08
TCF4-264ENST00000628391 EID1Q9Y6B2 187 aa2.04□□□□□ -2.08
TCF4-264ENST00000628391 EPN1Q9Y6I3 576 aaPredicted RBP2.04□□□□□ -2.08
TCF4-264ENST00000628391 SCINQ9Y6U3 715 aa2.04□□□□□ -2.08
TCF4-264ENST00000628391 SCN4AP35499 1836 aa2.03□□□□□ -2.08
TCF4-264ENST00000628391 RGPD1P0DJD0 1748 aa2.03□□□□□ -2.08
TCF4-264ENST00000628391 ZNF142P52746 1687 aaPredicted RBP2.03□□□□□ -2.08
TCF4-264ENST00000628391 ADAMTSL3P82987 1691 aa2.03□□□□□ -2.08
TCF4-264ENST00000628391 LMO7Q8WWI1 1683 aa2.03□□□□□ -2.08
TCF4-264ENST00000628391 PRG4Q92954 1404 aaPredicted RBP2.03□□□□□ -2.08
TCF4-264ENST00000628391 ATP8B3O60423 1300 aa2.03□□□□□ -2.08
TCF4-264ENST00000628391 SOS2Q07890 1332 aaPredicted RBP2.03□□□□□ -2.08
TCF4-264ENST00000628391 ADGRA3Q8IWK6 1321 aa2.03□□□□□ -2.08
TCF4-264ENST00000628391 MINK1Q8N4C8 1332 aaPredicted RBP2.03□□□□□ -2.08
TCF4-264ENST00000628391 A0A0B4J203 849 aa2.03□□□□□ -2.08
TCF4-264ENST00000628391 PNMA6EA0A0J9YXQ4 647 aa2.03□□□□□ -2.08
TCF4-264ENST00000628391 A0A1W2PQ67 120 aa2.03□□□□□ -2.08
TCF4-264ENST00000628391 A0A1W2PQC6 194 aa2.03□□□□□ -2.08
TCF4-264ENST00000628391 ESYT3A0FGR9 886 aa2.03□□□□□ -2.08
TCF4-264ENST00000628391 GOLGA8IPA6NC78 632 aa2.03□□□□□ -2.08
TCF4-264ENST00000628391 CCDC160A6NGH7 325 aa2.03□□□□□ -2.08
TCF4-264ENST00000628391 TRIM64A6NGJ6 449 aa2.03□□□□□ -2.08
TCF4-264ENST00000628391 TRIM64BA6NI03 449 aa2.03□□□□□ -2.08
TCF4-264ENST00000628391 ARID3CA6NKF2 412 aa2.03□□□□□ -2.08
TCF4-264ENST00000628391 C2orf81A6NN90 581 aa2.03□□□□□ -2.08
TCF4-264ENST00000628391 NUTM2BA6NNL0 878 aaPredicted RBP2.03□□□□□ -2.08
TCF4-264ENST00000628391 SPDYE16A6NNV3 312 aaPredicted RBP2.03□□□□□ -2.08
TCF4-264ENST00000628391 BTBD11A6QL63 1104 aa2.03□□□□□ -2.08
TCF4-264ENST00000628391 SOBPA7XYQ1 873 aa2.03□□□□□ -2.08
TCF4-264ENST00000628391 MIF4GDA9UHW6 222 aaKnown RBP2.03□□□□□ -2.08
TCF4-264ENST00000628391 NUTM2EB1AL46 878 aaPredicted RBP2.03□□□□□ -2.08
TCF4-264ENST00000628391 RSPH10B2B2RC85 870 aa2.03□□□□□ -2.08
TCF4-264ENST00000628391 F8W8V4 182 aa2.03□□□□□ -2.08
TCF4-264ENST00000628391 H3BNX3 289 aa2.03□□□□□ -2.08
TCF4-264ENST00000628391 CCDC188H7C350 402 aa2.03□□□□□ -2.08
TCF4-264ENST00000628391 K7EPI3 171 aa2.03□□□□□ -2.08
TCF4-264ENST00000628391 ZNF701M0R085 212 aaPredicted RBP2.03□□□□□ -2.08
TCF4-264ENST00000628391 DDX3XO00571 662 aaKnown RBP eCLIP2.03□□□□□ -2.08
TCF4-264ENST00000628391 ENPP3O14638 875 aa2.03□□□□□ -2.08
TCF4-264ENST00000628391 XPO1O14980 1071 aaKnown RBP2.03□□□□□ -2.08
TCF4-264ENST00000628391 VILLO15195 856 aa2.03□□□□□ -2.08
TCF4-264ENST00000628391 RGS16O15492 202 aaPredicted RBP2.03□□□□□ -2.08
TCF4-264ENST00000628391 ADCY6O43306 1168 aa2.03□□□□□ -2.08
TCF4-264ENST00000628391 RAD51CO43502 376 aa2.03□□□□□ -2.08
TCF4-264ENST00000628391 XPOTO43592 962 aaKnown RBP2.03□□□□□ -2.08
TCF4-264ENST00000628391 SULT1B1O43704 296 aa2.03□□□□□ -2.08
TCF4-264ENST00000628391 SCO2O43819 266 aa2.03□□□□□ -2.08
TCF4-264ENST00000628391 PDE8AO60658 829 aa2.03□□□□□ -2.08
TCF4-264ENST00000628391 KPNA6O60684 536 aa2.03□□□□□ -2.08
TCF4-264ENST00000628391 CCDC22O60826 627 aa2.03□□□□□ -2.08
TCF4-264ENST00000628391 RNASEH1O60930 286 aaKnown RBP2.03□□□□□ -2.08
TCF4-264ENST00000628391 PHF2O75151 1096 aa2.03□□□□□ -2.08
TCF4-264ENST00000628391 ZC3H11AO75152 810 aaKnown RBP eCLIP2.03□□□□□ -2.08
Retrieved 100 of 20,778 RNA–protein pairs in 22.6 ms