RNA–Protein interactions for RNA: ENST00000627317.1

PNKP-221, Transcript of polynucleotide kinase 3'-phosphatase, humanhuman

TSL 5

Gene PNKP, Length 767 nt, Biotype protein coding, Subcellular localisation Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
PNKP-221ENST00000627317 MRPS5P82675 430 aaKnown RBP16.1■□□□□ 0.17
PNKP-221ENST00000627317 PTPROQ16827 1216 aa16.1■□□□□ 0.17
PNKP-221ENST00000627317 TIGD5Q53EQ6 642 aa16.1■□□□□ 0.17
PNKP-221ENST00000627317 UBXN11Q5T124 520 aa16.1■□□□□ 0.17
PNKP-221ENST00000627317 EEF1DP3Q658K8 133 aa16.1■□□□□ 0.17
PNKP-221ENST00000627317 MPZL3Q6UWV2 235 aa16.1■□□□□ 0.17
PNKP-221ENST00000627317 LRRC55Q6ZSA7 311 aa16.1■□□□□ 0.17
PNKP-221ENST00000627317 HACE1Q8IYU2 909 aa16.1■□□□□ 0.17
PNKP-221ENST00000627317 TCHPQ9BT92 498 aa16.1■□□□□ 0.17
PNKP-221ENST00000627317 STRA6Q9BX79 667 aa16.1■□□□□ 0.17
PNKP-221ENST00000627317 EIF2AQ9BY44 585 aaKnown RBP16.1■□□□□ 0.17
PNKP-221ENST00000627317 TMEM117Q9H0C3 514 aa16.1■□□□□ 0.17
PNKP-221ENST00000627317 LMAN2LQ9H0V9 348 aa16.1■□□□□ 0.17
PNKP-221ENST00000627317 CWH43Q9H720 699 aa16.1■□□□□ 0.17
PNKP-221ENST00000627317 PLAGL2Q9UPG8 496 aa16.1■□□□□ 0.17
PNKP-221ENST00000627317 PCDHB2Q9Y5E7 798 aa16.1■□□□□ 0.17
PNKP-221ENST00000627317 ATG2AQ2TAZ0 1938 aa16.09■□□□□ 0.17
PNKP-221ENST00000627317 TBKBP1A7MCY6 615 aa16.09■□□□□ 0.17
PNKP-221ENST00000627317 PIGRP01833 764 aa16.09■□□□□ 0.17
PNKP-221ENST00000627317 HARSP12081 509 aaKnown RBP16.09■□□□□ 0.17
PNKP-221ENST00000627317 KCNA1Q09470 495 aa16.09■□□□□ 0.17
PNKP-221ENST00000627317 STK4Q13043 487 aa16.09■□□□□ 0.17
PNKP-221ENST00000627317 EPM2AIP1Q7L775 607 aaPredicted RBP16.09■□□□□ 0.17
PNKP-221ENST00000627317 KLHL23Q8NBE8 558 aa16.09■□□□□ 0.17
PNKP-221ENST00000627317 KIAA0895Q8NCT3 520 aa16.09■□□□□ 0.17
PNKP-221ENST00000627317 GTPBP4Q9BZE4 634 aaKnown RBP16.09■□□□□ 0.17
PNKP-221ENST00000627317 CDT1Q9H211 546 aa16.09■□□□□ 0.17
PNKP-221ENST00000627317 TMEM206Q9H813 350 aa16.09■□□□□ 0.17
PNKP-221ENST00000627317 COG5Q9UP83 839 aa16.09■□□□□ 0.17
PNKP-221ENST00000627317 FNDC1Q4ZHG4 1894 aaPredicted RBP16.09■□□□□ 0.17
PNKP-221ENST00000627317 PPAN-P2RY11A0A0B4J1V8 794 aaPredicted RBP16.08■□□□□ 0.16
PNKP-221ENST00000627317 CLDN3O15551 220 aa16.08■□□□□ 0.16
PNKP-221ENST00000627317 HOXA2O43364 376 aa16.08■□□□□ 0.16
PNKP-221ENST00000627317 ZNF623O75123 536 aa16.08■□□□□ 0.16
PNKP-221ENST00000627317 KIF20AO95235 890 aa16.08■□□□□ 0.16
PNKP-221ENST00000627317 EOMESO95936 686 aa16.08■□□□□ 0.16
PNKP-221ENST00000627317 NOLC1Q14978 699 aaKnown RBP eCLIP16.08■□□□□ 0.16
PNKP-221ENST00000627317 SKIV2LQ15477 1246 aaKnown RBP16.08■□□□□ 0.16
PNKP-221ENST00000627317 ZBTB33Q86T24 672 aa16.08■□□□□ 0.16
PNKP-221ENST00000627317 NELFCDQ8IXH7 590 aa16.08■□□□□ 0.16
PNKP-221ENST00000627317 SPATA20Q8TB22 786 aa16.08■□□□□ 0.16
PNKP-221ENST00000627317 SPPL3Q8TCT6 385 aa16.08■□□□□ 0.16
PNKP-221ENST00000627317 SCFD1Q8WVM8 642 aa16.08■□□□□ 0.16
PNKP-221ENST00000627317 HLA-CQ95604 372 aa16.08■□□□□ 0.16
PNKP-221ENST00000627317 PGBD4Q96DM1 585 aa16.08■□□□□ 0.16
PNKP-221ENST00000627317 APOL6Q9BWW8 343 aa16.08■□□□□ 0.16
PNKP-221ENST00000627317 NXF3Q9H4D5 531 aaKnown RBP16.08■□□□□ 0.16
PNKP-221ENST00000627317 ALG13Q9NP73 1137 aaKnown RBP16.08■□□□□ 0.16
PNKP-221ENST00000627317 TYW1Q9NV66 732 aaKnown RBP16.08■□□□□ 0.16
PNKP-221ENST00000627317 MAN1B1Q9UKM7 699 aa16.08■□□□□ 0.16
PNKP-221ENST00000627317 GDAQ9Y2T3 454 aa16.08■□□□□ 0.16
PNKP-221ENST00000627317 IPPQ9Y573 584 aa16.08■□□□□ 0.16
PNKP-221ENST00000627317 BRWD1Q9NSI6 2320 aa16.08■□□□□ 0.16
PNKP-221ENST00000627317 MEIS3P2A8K0S8 358 aa16.07■□□□□ 0.16
PNKP-221ENST00000627317 BIN1O00499 593 aa16.07■□□□□ 0.16
PNKP-221ENST00000627317 MCF2P10911 925 aa16.07■□□□□ 0.16
PNKP-221ENST00000627317 BMP1P13497 986 aa16.07■□□□□ 0.16
PNKP-221ENST00000627317 ITGA4P13612 1032 aa16.07■□□□□ 0.16
PNKP-221ENST00000627317 PROZP22891 400 aa16.07■□□□□ 0.16
PNKP-221ENST00000627317 KCNQ1P51787 676 aa16.07■□□□□ 0.16
PNKP-221ENST00000627317 BMT2Q1RMZ1 405 aa16.07■□□□□ 0.16
PNKP-221ENST00000627317 TCEAL5Q5H9L2 206 aa16.07■□□□□ 0.16
PNKP-221ENST00000627317 SLFN12LQ6IEE8 588 aa16.07■□□□□ 0.16
PNKP-221ENST00000627317 HS2ST1Q7LGA3 356 aa16.07■□□□□ 0.16
PNKP-221ENST00000627317 ABI1Q8IZP0 508 aa16.07■□□□□ 0.16
PNKP-221ENST00000627317 LRRC43Q8N309 656 aa16.07■□□□□ 0.16
PNKP-221ENST00000627317 COLGALT1Q8NBJ5 622 aa16.07■□□□□ 0.16
PNKP-221ENST00000627317 ZNF507Q8TCN5 953 aa16.07■□□□□ 0.16
PNKP-221ENST00000627317 ZBTB45Q96K62 511 aaPredicted RBP16.07■□□□□ 0.16
PNKP-221ENST00000627317 GBP3Q9H0R5 595 aa16.07■□□□□ 0.16
PNKP-221ENST00000627317 IKZF4Q9H2S9 585 aa16.07■□□□□ 0.16
PNKP-221ENST00000627317 NSUN3Q9H649 340 aaKnown RBP16.07■□□□□ 0.16
PNKP-221ENST00000627317 KIAA1468Q9P260 1216 aa16.07■□□□□ 0.16
PNKP-221ENST00000627317 ZMYM2Q9UBW7 1377 aa16.06■□□□□ 0.16
PNKP-221ENST00000627317 TISP43B9A030 160 aa16.06■□□□□ 0.16
PNKP-221ENST00000627317 ANKRD63C9JTQ0 380 aa16.06■□□□□ 0.16
PNKP-221ENST00000627317 MCL1Q07820 350 aa16.06■□□□□ 0.16
PNKP-221ENST00000627317 CCDC183Q5T5S1 534 aa16.06■□□□□ 0.16
PNKP-221ENST00000627317 ZNF658Q5TYW1 1059 aaPredicted RBP16.06■□□□□ 0.16
PNKP-221ENST00000627317 SLC39A4Q6P5W5 647 aa16.06■□□□□ 0.16
PNKP-221ENST00000627317 MRPL10Q7Z7H8 261 aaKnown RBP16.06■□□□□ 0.16
PNKP-221ENST00000627317 SMYD4Q8IYR2 804 aaPredicted RBP16.06■□□□□ 0.16
PNKP-221ENST00000627317 SMG8Q8ND04 991 aaKnown RBP16.06■□□□□ 0.16
PNKP-221ENST00000627317 POMGNT1Q8WZA1 660 aa16.06■□□□□ 0.16
PNKP-221ENST00000627317 LPPQ93052 612 aa16.06■□□□□ 0.16
PNKP-221ENST00000627317 SYAP1Q96A49 352 aaPredicted RBP16.06■□□□□ 0.16
PNKP-221ENST00000627317 MSTO1Q9BUK6 570 aa16.06■□□□□ 0.16
PNKP-221ENST00000627317 CCDC94Q9BW85 323 aaPredicted RBP16.06■□□□□ 0.16
PNKP-221ENST00000627317 UBE2ZQ9H832 354 aaPredicted RBP16.06■□□□□ 0.16
PNKP-221ENST00000627317 PTPRHQ9HD43 1115 aa16.06■□□□□ 0.16
PNKP-221ENST00000627317 HES2Q9Y543 173 aa16.06■□□□□ 0.16
PNKP-221ENST00000627317 ABLIM1O14639 778 aa16.05■□□□□ 0.16
PNKP-221ENST00000627317 LAG3P18627 525 aa16.05■□□□□ 0.16
PNKP-221ENST00000627317 HOXD13P35453 343 aa16.05■□□□□ 0.16
PNKP-221ENST00000627317 IRS1P35568 1242 aa16.05■□□□□ 0.16
PNKP-221ENST00000627317 STIM1Q13586 685 aa16.05■□□□□ 0.16
PNKP-221ENST00000627317 KNOP1Q1ED39 458 aaKnown RBP16.05■□□□□ 0.16
PNKP-221ENST00000627317 CTC1Q2NKJ3 1217 aa16.05■□□□□ 0.16
PNKP-221ENST00000627317 ISM2Q6H9L7 571 aa16.05■□□□□ 0.16
PNKP-221ENST00000627317 ARMCX5Q6P1M9 558 aa16.05■□□□□ 0.16
Retrieved 100 of 20,778 RNA–protein pairs in 15.2 ms