RNA–Protein interactions for RNA: ENST00000625423.2

VARS2-213, Transcript of valyl-tRNA synthetase 2, mitochondrial, humanhuman

TSL 2 BASIC

Gene VARS2, Length 3,362 nt, Biotype protein coding, Subcellular localisation Ribosome .

Download Table  
RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
VARS2-213ENST00000625423 CENPTQ96BT3 561 aa12.09□□□□□ -0.47
VARS2-213ENST00000625423 CCDC114Q96M63 670 aa12.09□□□□□ -0.47
VARS2-213ENST00000625423 ST6GALNAC4Q9H4F1 302 aa12.09□□□□□ -0.47
VARS2-213ENST00000625423 PLSCR1O15162 318 aa12.08□□□□□ -0.48
VARS2-213ENST00000625423 CALCAP01258 141 aa12.08□□□□□ -0.48
VARS2-213ENST00000625423 NCKAP1LP55160 1127 aa12.08□□□□□ -0.48
VARS2-213ENST00000625423 RWDD2BP57060 319 aa12.08□□□□□ -0.48
VARS2-213ENST00000625423 CYP1B1Q16678 543 aa12.08□□□□□ -0.48
VARS2-213ENST00000625423 XKR9Q5GH70 373 aa12.08□□□□□ -0.48
VARS2-213ENST00000625423 NIPA1Q7RTP0 329 aa12.08□□□□□ -0.48
VARS2-213ENST00000625423 CCDC25Q86WR0 208 aa12.08□□□□□ -0.48
VARS2-213ENST00000625423 HELQQ8TDG4 1101 aa12.08□□□□□ -0.48
VARS2-213ENST00000625423 PARD3BQ8TEW8 1205 aa12.08□□□□□ -0.48
VARS2-213ENST00000625423 TAAR1Q96RJ0 339 aa12.08□□□□□ -0.48
VARS2-213ENST00000625423 ZNF341Q9BYN7 854 aa12.08□□□□□ -0.48
VARS2-213ENST00000625423 CNOT7Q9UIV1 285 aaKnown RBP12.08□□□□□ -0.48
VARS2-213ENST00000625423 GTF3C4Q9UKN8 822 aa12.08□□□□□ -0.48
VARS2-213ENST00000625423 PMM2O15305 246 aa12.08□□□□□ -0.48
VARS2-213ENST00000625423 CLDN3O15551 220 aa12.08□□□□□ -0.48
VARS2-213ENST00000625423 RIPK2O43353 540 aa12.08□□□□□ -0.48
VARS2-213ENST00000625423 ATP9AO75110 1047 aa12.08□□□□□ -0.48
VARS2-213ENST00000625423 LYPLA2O95372 231 aa12.08□□□□□ -0.48
VARS2-213ENST00000625423 GBP1P32455 592 aa12.08□□□□□ -0.48
VARS2-213ENST00000625423 PDE6CP51160 858 aa12.08□□□□□ -0.48
VARS2-213ENST00000625423 SPDYE2Q495Y8 402 aa12.08□□□□□ -0.48
VARS2-213ENST00000625423 ANKRD20A8PQ5CZ79 823 aa12.08□□□□□ -0.48
VARS2-213ENST00000625423 C6orf118Q5T5N4 469 aa12.08□□□□□ -0.48
VARS2-213ENST00000625423 PCNX4Q63HM2 1172 aa12.08□□□□□ -0.48
VARS2-213ENST00000625423 RNF207Q6ZRF8 634 aa12.08□□□□□ -0.48
VARS2-213ENST00000625423 OGFOD1Q8N543 542 aa12.08□□□□□ -0.48
VARS2-213ENST00000625423 TAS1R2Q8TE23 839 aa12.08□□□□□ -0.48
VARS2-213ENST00000625423 ART4Q93070 314 aa12.08□□□□□ -0.48
VARS2-213ENST00000625423 RAVER2Q9HCJ3 691 aaKnown RBP12.08□□□□□ -0.48
VARS2-213ENST00000625423 TBX20Q9UMR3 447 aa12.08□□□□□ -0.48
VARS2-213ENST00000625423 USP20Q9Y2K6 914 aa12.08□□□□□ -0.48
VARS2-213ENST00000625423 DLATP10515 647 aaKnown RBP12.07□□□□□ -0.48
VARS2-213ENST00000625423 MYCLP12524 364 aaPredicted RBP12.07□□□□□ -0.48
VARS2-213ENST00000625423 CNGA1P29973 690 aa12.07□□□□□ -0.48
VARS2-213ENST00000625423 SMTNP53814 917 aa12.07□□□□□ -0.48
VARS2-213ENST00000625423 CDR2Q01850 454 aa12.07□□□□□ -0.48
VARS2-213ENST00000625423 ADCY2Q08462 1091 aa12.07□□□□□ -0.48
VARS2-213ENST00000625423 PLCB4Q15147 1175 aa12.07□□□□□ -0.48
VARS2-213ENST00000625423 SUPT20HQ8NEM7 779 aa12.07□□□□□ -0.48
VARS2-213ENST00000625423 SYTL5Q8TDW5 730 aaPredicted RBP12.07□□□□□ -0.48
VARS2-213ENST00000625423 ATXN2LQ8WWM7 1075 aaKnown RBP12.07□□□□□ -0.48
VARS2-213ENST00000625423 IWS1Q96ST2 819 aa12.07□□□□□ -0.48
VARS2-213ENST00000625423 ACTR5Q9H9F9 607 aaPredicted RBP12.07□□□□□ -0.48
VARS2-213ENST00000625423 SCAF8Q9UPN6 1271 aaKnown RBP12.07□□□□□ -0.48
VARS2-213ENST00000625423 AGTP01019 485 aa12.07□□□□□ -0.48
VARS2-213ENST00000625423 RARGP13631 454 aa12.07□□□□□ -0.48
VARS2-213ENST00000625423 SNRPFP62306 86 aaKnown RBP12.07□□□□□ -0.48
VARS2-213ENST00000625423 DGKZQ13574 1117 aa12.07□□□□□ -0.48
VARS2-213ENST00000625423 SLMAPQ14BN4 828 aa12.07□□□□□ -0.48
VARS2-213ENST00000625423 MCF2L2Q86YR7 1114 aa12.07□□□□□ -0.48
VARS2-213ENST00000625423 C4orf19Q8IY42 314 aa12.07□□□□□ -0.48
VARS2-213ENST00000625423 TMEM161BQ8NDZ6 487 aa12.07□□□□□ -0.48
VARS2-213ENST00000625423 C1orf54Q8WWF1 131 aa12.07□□□□□ -0.48
VARS2-213ENST00000625423 ZNF317Q96PQ6 595 aaPredicted RBP12.07□□□□□ -0.48
VARS2-213ENST00000625423 CEP89Q96ST8 783 aa12.07□□□□□ -0.48
VARS2-213ENST00000625423 CCDC113Q9H0I3 377 aa12.07□□□□□ -0.48
VARS2-213ENST00000625423 TAOK3Q9H2K8 898 aa12.07□□□□□ -0.48
VARS2-213ENST00000625423 TMEM8AQ9HCN3 771 aa12.07□□□□□ -0.48
VARS2-213ENST00000625423 SLC40A1Q9NP59 571 aa12.07□□□□□ -0.48
VARS2-213ENST00000625423 TBC1D22BQ9NU19 505 aa12.07□□□□□ -0.48
VARS2-213ENST00000625423 UVRAGQ9P2Y5 699 aa12.07□□□□□ -0.48
VARS2-213ENST00000625423 PASKQ96RG2 1323 aa12.07□□□□□ -0.48
VARS2-213ENST00000625423 ECEL1O95672 775 aa12.07□□□□□ -0.48
VARS2-213ENST00000625423 NPTX2P47972 431 aa12.07□□□□□ -0.48
VARS2-213ENST00000625423 SOX10P56693 466 aa12.07□□□□□ -0.48
VARS2-213ENST00000625423 SNX1Q13596 522 aa12.07□□□□□ -0.48
VARS2-213ENST00000625423 PPP1R7Q15435 360 aa12.07□□□□□ -0.48
VARS2-213ENST00000625423 CCDC38Q502W7 563 aa12.07□□□□□ -0.48
VARS2-213ENST00000625423 DHX37Q8IY37 1157 aaKnown RBP12.07□□□□□ -0.48
VARS2-213ENST00000625423 FBXL13Q8NEE6 735 aa12.07□□□□□ -0.48
VARS2-213ENST00000625423 DDX1Q92499 740 aaKnown RBP12.07□□□□□ -0.48
VARS2-213ENST00000625423 FAM84AQ96KN4 292 aa12.07□□□□□ -0.48
VARS2-213ENST00000625423 NT5C1BQ96P26 610 aa12.07□□□□□ -0.48
VARS2-213ENST00000625423 KLC4Q9NSK0 619 aa12.07□□□□□ -0.48
VARS2-213ENST00000625423 INTS9Q9NV88 658 aaKnown RBP12.07□□□□□ -0.48
VARS2-213ENST00000625423 RAB20Q9NX57 234 aa12.07□□□□□ -0.48
VARS2-213ENST00000625423 TCEAL9Q9UHQ7 104 aa12.07□□□□□ -0.48
VARS2-213ENST00000625423 EXOC7Q9UPT5 735 aa12.07□□□□□ -0.48
VARS2-213ENST00000625423 DENND3A2RUS2 1198 aa12.06□□□□□ -0.48
VARS2-213ENST00000625423 RASGRF2O14827 1237 aa12.06□□□□□ -0.48
VARS2-213ENST00000625423 TBC1D12O60347 775 aa12.06□□□□□ -0.48
VARS2-213ENST00000625423 RASSF9O75901 435 aa12.06□□□□□ -0.48
VARS2-213ENST00000625423 CCNE2O96020 404 aa12.06□□□□□ -0.48
VARS2-213ENST00000625423 GPC3P51654 580 aa12.06□□□□□ -0.48
VARS2-213ENST00000625423 PSMC5P62195 406 aa12.06□□□□□ -0.48
VARS2-213ENST00000625423 CYFIP1Q7L576 1253 aa12.06□□□□□ -0.48
VARS2-213ENST00000625423 PHLDB2Q86SQ0 1253 aa12.06□□□□□ -0.48
VARS2-213ENST00000625423 PSPC1Q8WXF1 523 aaKnown RBP12.06□□□□□ -0.48
VARS2-213ENST00000625423 GMLQ99445 158 aa12.06□□□□□ -0.48
VARS2-213ENST00000625423 PRMT1Q99873 361 aaKnown RBP12.06□□□□□ -0.48
VARS2-213ENST00000625423 COQ4Q9Y3A0 265 aa12.06□□□□□ -0.48
VARS2-213ENST00000625423 GRIN3BO60391 1043 aa12.06□□□□□ -0.48
VARS2-213ENST00000625423 ASNSP08243 561 aa12.06□□□□□ -0.48
VARS2-213ENST00000625423 KRT5P13647 590 aa12.06□□□□□ -0.48
VARS2-213ENST00000625423 BAG6P46379 1132 aa12.06□□□□□ -0.48
VARS2-213ENST00000625423 RPS6P62753 249 aaKnown RBP12.06□□□□□ -0.48
Retrieved 100 of 20,778 RNA–protein pairs in 31.8 ms