RNA–Protein interactions for RNA: ENST00000624700.3

CDKL5-207, Transcript of cyclin dependent kinase like 5, humanhuman

TSL 4

Gene CDKL5, Length 564 nt, Biotype protein coding, Subcellular localisation Endoplasmic reticulum, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CDKL5-207ENST00000624700 POLHQ9Y253 713 aa5.43□□□□□ -1.54
CDKL5-207ENST00000624700 TSC22D4Q9Y3Q8 395 aa5.43□□□□□ -1.54
CDKL5-207ENST00000624700 IPPQ9Y573 584 aa5.43□□□□□ -1.54
CDKL5-207ENST00000624700 UBE2QL1A1L167 161 aa5.42□□□□□ -1.54
CDKL5-207ENST00000624700 HOXA3O43365 443 aaPredicted RBP5.42□□□□□ -1.54
CDKL5-207ENST00000624700 MFAP3LO75121 409 aa5.42□□□□□ -1.54
CDKL5-207ENST00000624700 ITGA10O75578 1167 aa5.42□□□□□ -1.54
CDKL5-207ENST00000624700 GDF5P43026 501 aa5.42□□□□□ -1.54
CDKL5-207ENST00000624700 APBA1Q02410 837 aa5.42□□□□□ -1.54
CDKL5-207ENST00000624700 HHEXQ03014 270 aa5.42□□□□□ -1.54
CDKL5-207ENST00000624700 SP140Q13342 867 aa5.42□□□□□ -1.54
CDKL5-207ENST00000624700 MRPL49Q13405 166 aaKnown RBP5.42□□□□□ -1.54
CDKL5-207ENST00000624700 GRM7Q14831 915 aa5.42□□□□□ -1.54
CDKL5-207ENST00000624700 MLC1Q15049 377 aa5.42□□□□□ -1.54
CDKL5-207ENST00000624700 FAM47AQ5JRC9 791 aa5.42□□□□□ -1.54
CDKL5-207ENST00000624700 ATAT1Q5SQI0 421 aa5.42□□□□□ -1.54
CDKL5-207ENST00000624700 IFIT1BQ5T764 474 aaKnown RBP5.42□□□□□ -1.54
CDKL5-207ENST00000624700 Q6ZVL8 140 aa5.42□□□□□ -1.54
CDKL5-207ENST00000624700 SPRED1Q7Z699 444 aa5.42□□□□□ -1.54
CDKL5-207ENST00000624700 CIR1Q86X95 450 aaPredicted RBP5.42□□□□□ -1.54
CDKL5-207ENST00000624700 RHOT1Q8IXI2 618 aa5.42□□□□□ -1.54
CDKL5-207ENST00000624700 RAVER1Q8IY67 606 aaKnown RBP5.42□□□□□ -1.54
CDKL5-207ENST00000624700 HOXB13Q92826 284 aaPredicted RBP5.42□□□□□ -1.54
CDKL5-207ENST00000624700 HPS3Q969F9 1004 aa5.42□□□□□ -1.54
CDKL5-207ENST00000624700 IL17RAQ96F46 866 aa5.42□□□□□ -1.54
CDKL5-207ENST00000624700 LRRC37BQ96QE4 947 aa5.42□□□□□ -1.54
CDKL5-207ENST00000624700 KMT5AQ9NQR1 393 aa5.42□□□□□ -1.54
CDKL5-207ENST00000624700 LANCL2Q9NS86 450 aa5.42□□□□□ -1.54
CDKL5-207ENST00000624700 PPP4R1LQ9P1A2 415 aa5.42□□□□□ -1.54
CDKL5-207ENST00000624700 NCDNQ9UBB6 729 aa5.42□□□□□ -1.54
CDKL5-207ENST00000624700 TRPS1Q9UHF7 1281 aa5.42□□□□□ -1.54
CDKL5-207ENST00000624700 LIMCH1Q9UPQ0 1083 aa5.42□□□□□ -1.54
CDKL5-207ENST00000624700 MATN2O00339 956 aa5.41□□□□□ -1.54
CDKL5-207ENST00000624700 LPOP22079 712 aaPredicted RBP5.41□□□□□ -1.54
CDKL5-207ENST00000624700 PTPN7P35236 360 aa5.41□□□□□ -1.54
CDKL5-207ENST00000624700 IL12RB1P42701 662 aa5.41□□□□□ -1.54
CDKL5-207ENST00000624700 ADAM8P78325 824 aa5.41□□□□□ -1.54
CDKL5-207ENST00000624700 CDC42EP1Q00587 391 aa5.41□□□□□ -1.54
CDKL5-207ENST00000624700 RAB39AQ14964 217 aa5.41□□□□□ -1.54
CDKL5-207ENST00000624700 CDSNQ15517 529 aa5.41□□□□□ -1.54
CDKL5-207ENST00000624700 PGS1Q32NB8 556 aa5.41□□□□□ -1.54
CDKL5-207ENST00000624700 HS1BP3Q53T59 392 aa5.41□□□□□ -1.54
CDKL5-207ENST00000624700 METTL24Q5JXM2 366 aa5.41□□□□□ -1.54
CDKL5-207ENST00000624700 RSPH3Q86UC2 560 aa5.41□□□□□ -1.54
CDKL5-207ENST00000624700 WDR75Q8IWA0 830 aaKnown RBP5.41□□□□□ -1.54
CDKL5-207ENST00000624700 TPH2Q8IWU9 490 aa5.41□□□□□ -1.54
CDKL5-207ENST00000624700 DRC7Q8IY82 874 aa5.41□□□□□ -1.54
CDKL5-207ENST00000624700 SLC35G2Q8TBE7 412 aa5.41□□□□□ -1.54
CDKL5-207ENST00000624700 DPF2Q92785 391 aa5.41□□□□□ -1.54
CDKL5-207ENST00000624700 MVB12AQ96EY5 273 aa5.41□□□□□ -1.54
CDKL5-207ENST00000624700 CDK5RAP1Q96SZ6 601 aaKnown RBP5.41□□□□□ -1.54
CDKL5-207ENST00000624700 PDCD2LQ9BRP1 358 aa5.41□□□□□ -1.54
CDKL5-207ENST00000624700 SENP6Q9GZR1 1112 aaPredicted RBP5.41□□□□□ -1.54
CDKL5-207ENST00000624700 SCAND2PQ9GZW5 306 aaPredicted RBP5.41□□□□□ -1.54
CDKL5-207ENST00000624700 ENKD1Q9H0I2 346 aa5.41□□□□□ -1.54
CDKL5-207ENST00000624700 DMRT3Q9NQL9 472 aa5.41□□□□□ -1.54
CDKL5-207ENST00000624700 PRDM11Q9NQV5 511 aa5.41□□□□□ -1.54
CDKL5-207ENST00000624700 C1orf112Q9NSG2 853 aa5.41□□□□□ -1.54
CDKL5-207ENST00000624700 PLA2G3Q9NZ20 509 aa5.41□□□□□ -1.54
CDKL5-207ENST00000624700 HDAC5Q9UQL6 1122 aa5.41□□□□□ -1.54
CDKL5-207ENST00000624700 ADCY6O43306 1168 aa5.4□□□□□ -1.54
CDKL5-207ENST00000624700 AP1G1O43747 822 aa5.4□□□□□ -1.54
CDKL5-207ENST00000624700 RAD17O75943 681 aa5.4□□□□□ -1.54
CDKL5-207ENST00000624700 ATF3P18847 181 aa5.4□□□□□ -1.54
CDKL5-207ENST00000624700 EDNRBP24530 442 aa5.4□□□□□ -1.54
CDKL5-207ENST00000624700 SREBF1P36956 1147 aa5.4□□□□□ -1.54
CDKL5-207ENST00000624700 CASRP41180 1078 aa5.4□□□□□ -1.54
CDKL5-207ENST00000624700 FLT3LGP49771 235 aa5.4□□□□□ -1.54
CDKL5-207ENST00000624700 HMGA2P52926 109 aa5.4□□□□□ -1.54
CDKL5-207ENST00000624700 ICAM4Q14773 271 aa5.4□□□□□ -1.54
CDKL5-207ENST00000624700 SEPT2Q15019 361 aa5.4□□□□□ -1.54
CDKL5-207ENST00000624700 LRRC41Q15345 812 aa5.4□□□□□ -1.54
CDKL5-207ENST00000624700 EPM2AIP1Q7L775 607 aaPredicted RBP5.4□□□□□ -1.54
CDKL5-207ENST00000624700 ZNF572Q7Z3I7 529 aaPredicted RBP5.4□□□□□ -1.54
CDKL5-207ENST00000624700 APBB1IPQ7Z5R6 666 aaPredicted RBP5.4□□□□□ -1.54
CDKL5-207ENST00000624700 FAM83AQ86UY5 434 aa5.4□□□□□ -1.54
CDKL5-207ENST00000624700 ANKRD35Q8N283 1001 aa5.4□□□□□ -1.54
CDKL5-207ENST00000624700 TTC8Q8TAM2 541 aa5.4□□□□□ -1.54
CDKL5-207ENST00000624700 FAM167AQ96KS9 214 aa5.4□□□□□ -1.54
CDKL5-207ENST00000624700 DPYSL5Q9BPU6 564 aa5.4□□□□□ -1.54
CDKL5-207ENST00000624700 KLC2Q9H0B6 622 aa5.4□□□□□ -1.54
CDKL5-207ENST00000624700 EPC1Q9H2F5 836 aa5.4□□□□□ -1.54
CDKL5-207ENST00000624700 HECAQ9UBI9 543 aaPredicted RBP5.4□□□□□ -1.54
CDKL5-207ENST00000624700 NOB1Q9ULX3 412 aaKnown RBP5.4□□□□□ -1.54
CDKL5-207ENST00000624700 SLC30A1Q9Y6M5 507 aa5.4□□□□□ -1.54
CDKL5-207ENST00000624700 B5MCH6 92 aa5.39□□□□□ -1.55
CDKL5-207ENST00000624700 PJA2O43164 708 aa5.39□□□□□ -1.55
CDKL5-207ENST00000624700 CTNND1O60716 968 aaKnown RBP5.39□□□□□ -1.55
CDKL5-207ENST00000624700 IPO13O94829 963 aaKnown RBP5.39□□□□□ -1.55
CDKL5-207ENST00000624700 FKBP15Q5T1M5 1219 aa5.39□□□□□ -1.55
CDKL5-207ENST00000624700 CRIP3Q6Q6R5 217 aa5.39□□□□□ -1.55
CDKL5-207ENST00000624700 DOK3Q7L591 496 aa5.39□□□□□ -1.55
CDKL5-207ENST00000624700 POLNQ7Z5Q5 900 aa5.39□□□□□ -1.55
CDKL5-207ENST00000624700 GSPT2Q8IYD1 628 aaKnown RBP5.39□□□□□ -1.55
CDKL5-207ENST00000624700 GPR135Q8IZ08 494 aa5.39□□□□□ -1.55
CDKL5-207ENST00000624700 C3orf20Q8ND61 904 aa5.39□□□□□ -1.55
CDKL5-207ENST00000624700 NSUN6Q8TEA1 469 aaKnown RBP5.39□□□□□ -1.55
CDKL5-207ENST00000624700 TSR2Q969E8 191 aaKnown RBP5.39□□□□□ -1.55
CDKL5-207ENST00000624700 ZNF512Q96ME7 567 aaPredicted RBP5.39□□□□□ -1.55
CDKL5-207ENST00000624700 PLA2G12BQ9BX93 195 aa5.39□□□□□ -1.55
Retrieved 100 of 20,778 RNA–protein pairs in 14.8 ms