RNA–Protein interactions for RNA: ENST00000624341.3

ERCC6-213, Transcript of ERCC excision repair 6, chromatin remodeling factor, humanhuman

TSL 1 (best)

Gene ERCC6, Length 5,761 nt, Biotype nonsense mediated decay.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
ERCC6-213ENST00000624341 JAMLQ86YT9 394 aa5.97□□□□□ -1.45
ERCC6-213ENST00000624341 RHPN2Q8IUC4 686 aa5.97□□□□□ -1.45
ERCC6-213ENST00000624341 KIRREL3Q8IZU9 778 aa5.97□□□□□ -1.45
ERCC6-213ENST00000624341 ICA1LQ8NDH6 482 aa5.97□□□□□ -1.45
ERCC6-213ENST00000624341 SGSM3Q96HU1 749 aa5.97□□□□□ -1.45
ERCC6-213ENST00000624341 LACRTQ9GZZ8 138 aa5.97□□□□□ -1.45
ERCC6-213ENST00000624341 UBN1Q9NPG3 1134 aa5.97□□□□□ -1.45
ERCC6-213ENST00000624341 BATF3Q9NR55 127 aa5.97□□□□□ -1.45
ERCC6-213ENST00000624341 IRAK4Q9NWZ3 460 aa5.97□□□□□ -1.45
ERCC6-213ENST00000624341 SLC9A2Q9UBY0 812 aa5.97□□□□□ -1.45
ERCC6-213ENST00000624341 MARCOQ9UEW3 520 aaPredicted RBP5.97□□□□□ -1.45
ERCC6-213ENST00000624341 CHORDC1Q9UHD1 332 aaPredicted RBP5.97□□□□□ -1.45
ERCC6-213ENST00000624341 TNS1Q9HBL0 1735 aaKnown RBP5.97□□□□□ -1.45
ERCC6-213ENST00000624341 PARP4Q9UKK3 1724 aaKnown RBP5.97□□□□□ -1.45
ERCC6-213ENST00000624341 PFASO15067 1338 aa5.97□□□□□ -1.45
ERCC6-213ENST00000624341 RGPD3A6NKT7 1758 aaPredicted RBP5.97□□□□□ -1.45
ERCC6-213ENST00000624341 RGPD4Q7Z3J3 1758 aa5.97□□□□□ -1.45
ERCC6-213ENST00000624341 CD163L1Q9NR16 1453 aa5.97□□□□□ -1.45
ERCC6-213ENST00000624341 STXBP3O00186 592 aa5.97□□□□□ -1.45
ERCC6-213ENST00000624341 HSPA8P11142 646 aaKnown RBP5.97□□□□□ -1.45
ERCC6-213ENST00000624341 GNA15P30679 374 aa5.97□□□□□ -1.45
ERCC6-213ENST00000624341 HSD17B3P37058 310 aa5.97□□□□□ -1.45
ERCC6-213ENST00000624341 INPP1P49441 399 aa5.97□□□□□ -1.45
ERCC6-213ENST00000624341 GRAPQ13588 217 aa5.97□□□□□ -1.45
ERCC6-213ENST00000624341 LMBRD2Q68DH5 695 aaPredicted RBP5.97□□□□□ -1.45
ERCC6-213ENST00000624341 CYB5D1Q6P9G0 228 aa5.97□□□□□ -1.45
ERCC6-213ENST00000624341 RBM43Q6ZSC3 357 aaKnown RBP5.97□□□□□ -1.45
ERCC6-213ENST00000624341 MYCBPAPQ8TBZ2 947 aa5.97□□□□□ -1.45
ERCC6-213ENST00000624341 GRAPLQ8TC17 118 aaPredicted RBP5.97□□□□□ -1.45
ERCC6-213ENST00000624341 KLF6Q99612 283 aaPredicted RBP5.97□□□□□ -1.45
ERCC6-213ENST00000624341 C7orf25Q9BPX7 421 aa5.97□□□□□ -1.45
ERCC6-213ENST00000624341 ISCUQ9H1K1 167 aa5.97□□□□□ -1.45
ERCC6-213ENST00000624341 NOD2Q9HC29 1040 aa5.97□□□□□ -1.45
ERCC6-213ENST00000624341 GTSE1Q9NYZ3 720 aa5.97□□□□□ -1.45
ERCC6-213ENST00000624341 UTYO14607 1347 aa5.97□□□□□ -1.45
ERCC6-213ENST00000624341 PDXKO00764 312 aa5.97□□□□□ -1.45
ERCC6-213ENST00000624341 ORC4O43929 436 aa5.97□□□□□ -1.45
ERCC6-213ENST00000624341 ALDH18A1P54886 795 aaKnown RBP5.97□□□□□ -1.45
ERCC6-213ENST00000624341 COPS2P61201 443 aa5.97□□□□□ -1.45
ERCC6-213ENST00000624341 PTPAQ15257 358 aa5.97□□□□□ -1.45
ERCC6-213ENST00000624341 NAB2Q15742 525 aa5.97□□□□□ -1.45
ERCC6-213ENST00000624341 Q3C1V9 767 aa5.97□□□□□ -1.45
ERCC6-213ENST00000624341 TAF1BQ53T94 588 aaPredicted RBP5.97□□□□□ -1.45
ERCC6-213ENST00000624341 SLFN12LQ6IEE8 588 aa5.97□□□□□ -1.45
ERCC6-213ENST00000624341 WDR93Q6P2C0 686 aa5.97□□□□□ -1.45
ERCC6-213ENST00000624341 TMEM154Q6P9G4 183 aa5.97□□□□□ -1.45
ERCC6-213ENST00000624341 C16orf87Q6PH81 154 aa5.97□□□□□ -1.45
ERCC6-213ENST00000624341 TMEM179Q6ZVK1 233 aa5.97□□□□□ -1.45
ERCC6-213ENST00000624341 TRAPPC11Q7Z392 1133 aa5.97□□□□□ -1.45
ERCC6-213ENST00000624341 FOXP4Q8IVH2 680 aaPredicted RBP5.97□□□□□ -1.45
ERCC6-213ENST00000624341 RMDN2Q96LZ7 410 aa5.97□□□□□ -1.45
ERCC6-213ENST00000624341 EIF2AK1Q9BQI3 630 aaKnown RBP5.97□□□□□ -1.45
ERCC6-213ENST00000624341 RPF1Q9H9Y2 349 aaKnown RBP5.97□□□□□ -1.45
ERCC6-213ENST00000624341 KLHL8Q9P2G9 620 aaPredicted RBP5.97□□□□□ -1.45
ERCC6-213ENST00000624341 PRDM4Q9UKN5 801 aa5.97□□□□□ -1.45
ERCC6-213ENST00000624341 TRAF3IP3Q9Y228 551 aa5.97□□□□□ -1.45
ERCC6-213ENST00000624341 CAPN6Q9Y6Q1 641 aa5.97□□□□□ -1.45
ERCC6-213ENST00000624341 PNPLA7Q6ZV29 1317 aa5.97□□□□□ -1.45
ERCC6-213ENST00000624341 CRB1P82279 1406 aa5.97□□□□□ -1.45
ERCC6-213ENST00000624341 PHF2O75151 1096 aa5.97□□□□□ -1.45
ERCC6-213ENST00000624341 RAD17O75943 681 aa5.97□□□□□ -1.45
ERCC6-213ENST00000624341 GGPS1O95749 300 aa5.97□□□□□ -1.45
ERCC6-213ENST00000624341 APBA3O96018 575 aa5.97□□□□□ -1.45
ERCC6-213ENST00000624341 CCND1P24385 295 aa5.97□□□□□ -1.45
ERCC6-213ENST00000624341 CCND2P30279 289 aa5.97□□□□□ -1.45
ERCC6-213ENST00000624341 MTMR1Q13613 665 aa5.97□□□□□ -1.45
ERCC6-213ENST00000624341 HIF1AQ16665 826 aa5.97□□□□□ -1.45
ERCC6-213ENST00000624341 TMED8Q6PL24 325 aaPredicted RBP5.97□□□□□ -1.45
ERCC6-213ENST00000624341 ACAD11Q709F0 780 aa5.97□□□□□ -1.45
ERCC6-213ENST00000624341 STAMBPL1Q96FJ0 436 aa5.97□□□□□ -1.45
ERCC6-213ENST00000624341 CDHR1Q96JP9 859 aa5.97□□□□□ -1.45
ERCC6-213ENST00000624341 FAM84BQ96KN1 310 aaPredicted RBP5.97□□□□□ -1.45
ERCC6-213ENST00000624341 SLIT3O75094 1523 aa5.97□□□□□ -1.45
ERCC6-213ENST00000624341 UBE4BO95155 1302 aa5.97□□□□□ -1.45
ERCC6-213ENST00000624341 ABCB11O95342 1321 aa5.97□□□□□ -1.45
ERCC6-213ENST00000624341 PDS5AQ29RF7 1337 aaKnown RBP5.97□□□□□ -1.45
ERCC6-213ENST00000624341 PITPNM2Q9BZ72 1349 aa5.97□□□□□ -1.45
ERCC6-213ENST00000624341 NVLO15381 856 aaKnown RBP5.97□□□□□ -1.45
ERCC6-213ENST00000624341 CCDC22O60826 627 aa5.97□□□□□ -1.45
ERCC6-213ENST00000624341 CALB1P05937 261 aa5.97□□□□□ -1.45
ERCC6-213ENST00000624341 HNRNPCP07910 306 aaKnown RBP eCLIP5.97□□□□□ -1.45
ERCC6-213ENST00000624341 PSMC1P62191 440 aaKnown RBP5.97□□□□□ -1.45
ERCC6-213ENST00000624341 CUL3Q13618 768 aa5.97□□□□□ -1.45
ERCC6-213ENST00000624341 PDIA5Q14554 519 aa5.97□□□□□ -1.45
ERCC6-213ENST00000624341 MORF4L2Q15014 288 aa5.97□□□□□ -1.45
ERCC6-213ENST00000624341 CYTH1Q15438 398 aa5.97□□□□□ -1.45
ERCC6-213ENST00000624341 LRRC34Q8IZ02 419 aa5.97□□□□□ -1.45
ERCC6-213ENST00000624341 SIX6OS1Q8N1H7 587 aa5.97□□□□□ -1.45
ERCC6-213ENST00000624341 OR6B3Q8NGW1 331 aa5.97□□□□□ -1.45
ERCC6-213ENST00000624341 CASKIN2Q8WXE0 1202 aa5.97□□□□□ -1.45
ERCC6-213ENST00000624341 ERP44Q9BS26 406 aa5.97□□□□□ -1.45
ERCC6-213ENST00000624341 LXNQ9BS40 222 aa5.97□□□□□ -1.45
ERCC6-213ENST00000624341 ING2Q9H160 280 aa5.97□□□□□ -1.45
ERCC6-213ENST00000624341 EPB41L4AQ9HCS5 686 aaPredicted RBP5.97□□□□□ -1.45
ERCC6-213ENST00000624341 CDHR2Q9BYE9 1310 aa5.96□□□□□ -1.45
ERCC6-213ENST00000624341 RPL17-C18orf32A0A0A6YYL6 228 aaKnown RBP5.96□□□□□ -1.45
ERCC6-213ENST00000624341 RTN2O75298 545 aa5.96□□□□□ -1.45
ERCC6-213ENST00000624341 TFRCP02786 760 aaKnown RBP5.96□□□□□ -1.45
ERCC6-213ENST00000624341 S100BP04271 92 aaPredicted RBP5.96□□□□□ -1.45
ERCC6-213ENST00000624341 NT5C2P49902 561 aa5.96□□□□□ -1.45
Retrieved 100 of 20,778 RNA–protein pairs in 23.6 ms