RNA–Protein interactions for RNA: ENST00000621245.4

CPNE3-210, Transcript of copine 3, humanhuman

TSL 5

Gene CPNE3, Length 581 nt, Biotype protein coding, Subcellular localisation Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CPNE3-210ENST00000621245 ZBTB33Q86T24 672 aa12.68□□□□□ -0.38
CPNE3-210ENST00000621245 CABP7Q86V35 215 aa12.68□□□□□ -0.38
CPNE3-210ENST00000621245 C4orf32Q8N8J7 132 aa12.68□□□□□ -0.38
CPNE3-210ENST00000621245 TDRD5Q8NAT2 981 aaKnown RBP12.68□□□□□ -0.38
CPNE3-210ENST00000621245 HASPINQ8TF76 798 aa12.68□□□□□ -0.38
CPNE3-210ENST00000621245 RSPH1Q8WYR4 309 aa12.68□□□□□ -0.38
CPNE3-210ENST00000621245 CCDC51Q96ER9 411 aa12.68□□□□□ -0.38
CPNE3-210ENST00000621245 C8orf76Q96K31 380 aa12.68□□□□□ -0.38
CPNE3-210ENST00000621245 CCDC43Q96MW1 224 aaKnown RBP12.68□□□□□ -0.38
CPNE3-210ENST00000621245 NECTIN4Q96NY8 510 aa12.68□□□□□ -0.38
CPNE3-210ENST00000621245 FAM193BQ96PV7 902 aaPredicted RBP12.68□□□□□ -0.38
CPNE3-210ENST00000621245 RPS6KC1Q96S38 1066 aa12.68□□□□□ -0.38
CPNE3-210ENST00000621245 NFKBIZQ9BYH8 718 aa12.68□□□□□ -0.38
CPNE3-210ENST00000621245 GPR62Q9BZJ7 368 aa12.68□□□□□ -0.38
CPNE3-210ENST00000621245 CCDC113Q9H0I3 377 aa12.68□□□□□ -0.38
CPNE3-210ENST00000621245 PDZD7Q9H5P4 517 aa12.68□□□□□ -0.38
CPNE3-210ENST00000621245 MAN1C1Q9NR34 630 aa12.68□□□□□ -0.38
CPNE3-210ENST00000621245 LIMD1Q9UGP4 676 aa12.68□□□□□ -0.38
CPNE3-210ENST00000621245 LIMCH1Q9UPQ0 1083 aa12.68□□□□□ -0.38
CPNE3-210ENST00000621245 NR2E1Q9Y466 385 aa12.68□□□□□ -0.38
CPNE3-210ENST00000621245 A0A1B0GUA9 196 aa12.67□□□□□ -0.38
CPNE3-210ENST00000621245 PP2D1A8MPX8 630 aa12.67□□□□□ -0.38
CPNE3-210ENST00000621245 PTGESO14684 152 aa12.67□□□□□ -0.38
CPNE3-210ENST00000621245 GABBR2O75899 941 aa12.67□□□□□ -0.38
CPNE3-210ENST00000621245 URODP06132 367 aa12.67□□□□□ -0.38
CPNE3-210ENST00000621245 OR52Z1P0C646 297 aa12.67□□□□□ -0.38
CPNE3-210ENST00000621245 RPL17P18621 184 aaKnown RBP12.67□□□□□ -0.38
CPNE3-210ENST00000621245 AXLP30530 894 aa12.67□□□□□ -0.38
CPNE3-210ENST00000621245 TOB1P50616 345 aaPredicted RBP12.67□□□□□ -0.38
CPNE3-210ENST00000621245 POU5F1BQ06416 359 aa12.67□□□□□ -0.38
CPNE3-210ENST00000621245 TTC38Q5R3I4 469 aa12.67□□□□□ -0.38
CPNE3-210ENST00000621245 SLC27A1Q6PCB7 646 aa12.67□□□□□ -0.38
CPNE3-210ENST00000621245 GLYCTKQ8IVS8 523 aa12.67□□□□□ -0.38
CPNE3-210ENST00000621245 ST13P5Q8NFI4 369 aaPredicted RBP12.67□□□□□ -0.38
CPNE3-210ENST00000621245 RIPOR3Q96MK2 946 aa12.67□□□□□ -0.38
CPNE3-210ENST00000621245 POLR3CQ9BUI4 534 aaPredicted RBP12.67□□□□□ -0.38
CPNE3-210ENST00000621245 SFXN1Q9H9B4 322 aa12.67□□□□□ -0.38
CPNE3-210ENST00000621245 TUFT1Q9NNX1 390 aa12.67□□□□□ -0.38
CPNE3-210ENST00000621245 MRPL17Q9NRX2 175 aaKnown RBP12.67□□□□□ -0.38
CPNE3-210ENST00000621245 KANSL3Q9P2N6 904 aa12.67□□□□□ -0.38
CPNE3-210ENST00000621245 DBR1Q9UK59 544 aaKnown RBP12.67□□□□□ -0.38
CPNE3-210ENST00000621245 SORCS3Q9UPU3 1222 aa12.67□□□□□ -0.38
CPNE3-210ENST00000621245 ANK1P16157 1881 aa12.67□□□□□ -0.38
CPNE3-210ENST00000621245 CASTOR2A6NHX0 329 aa12.66□□□□□ -0.38
CPNE3-210ENST00000621245 LIG1P18858 919 aa12.66□□□□□ -0.38
CPNE3-210ENST00000621245 GLUD2P49448 558 aa12.66□□□□□ -0.38
CPNE3-210ENST00000621245 GIT2Q14161 759 aa12.66□□□□□ -0.38
CPNE3-210ENST00000621245 NAB2Q15742 525 aa12.66□□□□□ -0.38
CPNE3-210ENST00000621245 IL17AQ16552 155 aa12.66□□□□□ -0.38
CPNE3-210ENST00000621245 RTP2Q5QGT7 225 aa12.66□□□□□ -0.38
CPNE3-210ENST00000621245 FUT10Q6P4F1 479 aa12.66□□□□□ -0.38
CPNE3-210ENST00000621245 PADI6Q6TGC4 694 aa12.66□□□□□ -0.38
CPNE3-210ENST00000621245 PRSS55Q6UWB4 352 aaPredicted RBP12.66□□□□□ -0.38
CPNE3-210ENST00000621245 NOSTRINQ8IVI9 506 aa12.66□□□□□ -0.38
CPNE3-210ENST00000621245 SUGP1Q8IWZ8 645 aaKnown RBP12.66□□□□□ -0.38
CPNE3-210ENST00000621245 ZDHHC14Q8IZN3 488 aa12.66□□□□□ -0.38
CPNE3-210ENST00000621245 TMEM105Q8N8V8 129 aa12.66□□□□□ -0.38
CPNE3-210ENST00000621245 TMEM87AQ8NBN3 555 aa12.66□□□□□ -0.38
CPNE3-210ENST00000621245 CNNM3Q8NE01 707 aa12.66□□□□□ -0.38
CPNE3-210ENST00000621245 FBXO18Q8NFZ0 1043 aa12.66□□□□□ -0.38
CPNE3-210ENST00000621245 ZNF707Q96C28 371 aaPredicted RBP12.66□□□□□ -0.38
CPNE3-210ENST00000621245 EMILIN2Q9BXX0 1053 aa12.66□□□□□ -0.38
CPNE3-210ENST00000621245 TRIM6Q9C030 488 aaPredicted RBP12.66□□□□□ -0.38
CPNE3-210ENST00000621245 FZD8Q9H461 694 aa12.66□□□□□ -0.38
CPNE3-210ENST00000621245 CHST7Q9NS84 486 aa12.66□□□□□ -0.38
CPNE3-210ENST00000621245 SNTG2Q9NY99 539 aa12.66□□□□□ -0.38
CPNE3-210ENST00000621245 PARP2Q9UGN5 583 aa12.66□□□□□ -0.38
CPNE3-210ENST00000621245 GIT1Q9Y2X7 761 aa12.66□□□□□ -0.38
CPNE3-210ENST00000621245 NARSO43776 548 aaKnown RBP12.65□□□□□ -0.38
CPNE3-210ENST00000621245 RECQL4O94761 1208 aa12.65□□□□□ -0.38
CPNE3-210ENST00000621245 KIF4AO95239 1232 aa12.65□□□□□ -0.38
CPNE3-210ENST00000621245 PRKCBP05771 671 aa12.65□□□□□ -0.38
CPNE3-210ENST00000621245 RPA1P27694 616 aa12.65□□□□□ -0.38
CPNE3-210ENST00000621245 AVPR2P30518 371 aa12.65□□□□□ -0.38
CPNE3-210ENST00000621245 DSG1Q02413 1049 aa12.65□□□□□ -0.38
CPNE3-210ENST00000621245 GRIK3Q13003 919 aa12.65□□□□□ -0.38
CPNE3-210ENST00000621245 MTMR3Q13615 1198 aa12.65□□□□□ -0.38
CPNE3-210ENST00000621245 BMS1Q14692 1282 aaKnown RBP12.65□□□□□ -0.38
CPNE3-210ENST00000621245 PCBP1Q15365 356 aaKnown RBP eCLIP12.65□□□□□ -0.38
CPNE3-210ENST00000621245 SAFBQ15424 915 aaKnown RBP eCLIP12.65□□□□□ -0.38
CPNE3-210ENST00000621245 ATAT1Q5SQI0 421 aa12.65□□□□□ -0.38
CPNE3-210ENST00000621245 NT5DC1Q5TFE4 455 aa12.65□□□□□ -0.38
CPNE3-210ENST00000621245 PALB2Q86YC2 1186 aa12.65□□□□□ -0.38
CPNE3-210ENST00000621245 RSAD2Q8WXG1 361 aa12.65□□□□□ -0.38
CPNE3-210ENST00000621245 KCNH6Q9H252 994 aa12.65□□□□□ -0.38
CPNE3-210ENST00000621245 FOXP1Q9H334 677 aaPredicted RBP12.65□□□□□ -0.38
CPNE3-210ENST00000621245 RXFP1Q9HBX9 757 aa12.65□□□□□ -0.38
CPNE3-210ENST00000621245 UBN1Q9NPG3 1134 aa12.65□□□□□ -0.38
CPNE3-210ENST00000621245 PCDHB6Q9Y5E3 794 aa12.65□□□□□ -0.38
CPNE3-210ENST00000621245 SPTBN4Q9H254 2564 aa12.65□□□□□ -0.39
CPNE3-210ENST00000621245 ZNF292O60281 2723 aa12.64□□□□□ -0.39
CPNE3-210ENST00000621245 CCDC195A0A1B0GUA6 201 aa12.64□□□□□ -0.39
CPNE3-210ENST00000621245 ARHGEF35A5YM69 484 aa12.64□□□□□ -0.39
CPNE3-210ENST00000621245 ADAM12O43184 909 aa12.64□□□□□ -0.39
CPNE3-210ENST00000621245 TGM5O43548 720 aa12.64□□□□□ -0.39
CPNE3-210ENST00000621245 CD2BP2O95400 341 aaKnown RBP12.64□□□□□ -0.39
CPNE3-210ENST00000621245 XRCC6P12956 609 aaKnown RBP eCLIP12.64□□□□□ -0.39
CPNE3-210ENST00000621245 CYP11B2P19099 503 aa12.64□□□□□ -0.39
CPNE3-210ENST00000621245 CDC25AP30304 524 aa12.64□□□□□ -0.39
CPNE3-210ENST00000621245 FAM187BQ17R55 369 aa12.64□□□□□ -0.39
Retrieved 100 of 20,778 RNA–protein pairs in 19.4 ms