RNA–Protein interactions for RNA: ENST00000620466.4

ALMS1-208, Transcript of ALMS1, centrosome and basal body associated protein, humanhuman

TSL 2

Gene ALMS1, Length 6,720 nt, Biotype retained intron, Subcellular localisation Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
ALMS1-208ENST00000620466 XPO6Q96QU8 1125 aaKnown RBP8.87□□□□□ -0.99
ALMS1-208ENST00000620466 GNGT2O14610 69 aa8.87□□□□□ -0.99
ALMS1-208ENST00000620466 CLDN3O15551 220 aa8.87□□□□□ -0.99
ALMS1-208ENST00000620466 ASNSP08243 561 aa8.87□□□□□ -0.99
ALMS1-208ENST00000620466 COPB2P35606 906 aa8.87□□□□□ -0.99
ALMS1-208ENST00000620466 KLHL38Q2WGJ6 581 aa8.87□□□□□ -0.99
ALMS1-208ENST00000620466 PRR5LQ6MZQ0 368 aa8.87□□□□□ -0.99
ALMS1-208ENST00000620466 TRIM55Q9BYV6 548 aa8.87□□□□□ -0.99
ALMS1-208ENST00000620466 HACD3Q9P035 362 aa8.87□□□□□ -0.99
ALMS1-208ENST00000620466 LCMT1Q9UIC8 334 aa8.87□□□□□ -0.99
ALMS1-208ENST00000620466 ORC6Q9Y5N6 252 aa8.87□□□□□ -0.99
ALMS1-208ENST00000620466 UBE4BO95155 1302 aa8.86□□□□□ -0.99
ALMS1-208ENST00000620466 GPR75-ASB3A0A0A6YYF3 556 aa8.86□□□□□ -0.99
ALMS1-208ENST00000620466 FBXL13Q8NEE6 735 aa8.86□□□□□ -0.99
ALMS1-208ENST00000620466 FAM149B1Q96BN6 582 aa8.86□□□□□ -0.99
ALMS1-208ENST00000620466 KLHL11Q9NVR0 708 aa8.86□□□□□ -0.99
ALMS1-208ENST00000620466 H0Y3Z8 333 aa8.86□□□□□ -0.99
ALMS1-208ENST00000620466 COPEO14579 308 aa8.86□□□□□ -0.99
ALMS1-208ENST00000620466 ATMINO43313 823 aaPredicted RBP8.86□□□□□ -0.99
ALMS1-208ENST00000620466 LMNAP02545 664 aaKnown RBP8.86□□□□□ -0.99
ALMS1-208ENST00000620466 PRLRP16471 622 aa8.86□□□□□ -0.99
ALMS1-208ENST00000620466 PON1P27169 355 aa8.86□□□□□ -0.99
ALMS1-208ENST00000620466 FIGNQ5HY92 759 aa8.86□□□□□ -0.99
ALMS1-208ENST00000620466 LMBRD2Q68DH5 695 aaPredicted RBP8.86□□□□□ -0.99
ALMS1-208ENST00000620466 LDHDQ86WU2 507 aa8.86□□□□□ -0.99
ALMS1-208ENST00000620466 TTC30BQ8N4P2 665 aa8.86□□□□□ -0.99
ALMS1-208ENST00000620466 DNAAF3Q8N9W5 541 aa8.86□□□□□ -0.99
ALMS1-208ENST00000620466 RNF139Q8WU17 664 aa8.86□□□□□ -0.99
ALMS1-208ENST00000620466 PITPNM2Q9BZ72 1349 aa8.86□□□□□ -0.99
ALMS1-208ENST00000620466 ARHGEF37A1IGU5 675 aa8.86□□□□□ -0.99
ALMS1-208ENST00000620466 MGEA5O60502 916 aa8.86□□□□□ -0.99
ALMS1-208ENST00000620466 ELF1P32519 619 aa8.86□□□□□ -0.99
ALMS1-208ENST00000620466 LARP7Q4G0J3 582 aaKnown RBP eCLIP8.86□□□□□ -0.99
ALMS1-208ENST00000620466 CEP55Q53EZ4 464 aa8.86□□□□□ -0.99
ALMS1-208ENST00000620466 TMEM35BQ8NCS4 154 aa8.86□□□□□ -0.99
ALMS1-208ENST00000620466 RNF217Q8TC41 542 aa8.86□□□□□ -0.99
ALMS1-208ENST00000620466 ZBED2Q9BTP6 218 aa8.86□□□□□ -0.99
ALMS1-208ENST00000620466 LRRC4Q9HBW1 653 aa8.86□□□□□ -0.99
ALMS1-208ENST00000620466 NYAP2Q9P242 653 aa8.86□□□□□ -0.99
ALMS1-208ENST00000620466 ARHGAP20Q9P2F6 1191 aa8.86□□□□□ -0.99
ALMS1-208ENST00000620466 TBXAS1P24557 533 aaPredicted RBP8.86□□□□□ -0.99
ALMS1-208ENST00000620466 GPC3P51654 580 aa8.86□□□□□ -0.99
ALMS1-208ENST00000620466 ENOSF1Q7L5Y1 443 aa8.86□□□□□ -0.99
ALMS1-208ENST00000620466 SPATA21Q7Z572 469 aa8.86□□□□□ -0.99
ALMS1-208ENST00000620466 CPA5Q8WXQ8 436 aa8.86□□□□□ -0.99
ALMS1-208ENST00000620466 MRPL46Q9H2W6 279 aaKnown RBP8.86□□□□□ -0.99
ALMS1-208ENST00000620466 ZNF302Q9NR11 478 aa8.86□□□□□ -0.99
ALMS1-208ENST00000620466 SCOCQ9UIL1 159 aa8.86□□□□□ -0.99
ALMS1-208ENST00000620466 RAB21Q9UL25 225 aa8.86□□□□□ -0.99
ALMS1-208ENST00000620466 AKAP12Q02952 1782 aa8.86□□□□□ -0.99
ALMS1-208ENST00000620466 CCDC195A0A1B0GUA6 201 aa8.86□□□□□ -0.99
ALMS1-208ENST00000620466 NDUFB10O96000 172 aa8.86□□□□□ -0.99
ALMS1-208ENST00000620466 SCP2P22307 547 aa8.86□□□□□ -0.99
ALMS1-208ENST00000620466 ZNF699Q32M78 642 aa8.86□□□□□ -0.99
ALMS1-208ENST00000620466 RASIP1Q5U651 963 aa8.86□□□□□ -0.99
ALMS1-208ENST00000620466 THNSL1Q8IYQ7 743 aa8.86□□□□□ -0.99
ALMS1-208ENST00000620466 ARL8AQ96BM9 186 aa8.86□□□□□ -0.99
ALMS1-208ENST00000620466 SLC10A4Q96EP9 437 aa8.86□□□□□ -0.99
ALMS1-208ENST00000620466 NLRP4Q96MN2 994 aa8.86□□□□□ -0.99
ALMS1-208ENST00000620466 FAM237AA0A1B0GTK4 181 aa8.85□□□□□ -0.99
ALMS1-208ENST00000620466 MED24O75448 989 aa8.85□□□□□ -0.99
ALMS1-208ENST00000620466 SLC1A1P43005 524 aa8.85□□□□□ -0.99
ALMS1-208ENST00000620466 EPHB1P54762 984 aa8.85□□□□□ -0.99
ALMS1-208ENST00000620466 ANKRD20A4Q4UJ75 823 aa8.85□□□□□ -0.99
ALMS1-208ENST00000620466 ANKRD20A8PQ5CZ79 823 aa8.85□□□□□ -0.99
ALMS1-208ENST00000620466 ANKRD20A2Q5SQ80 823 aa8.85□□□□□ -0.99
ALMS1-208ENST00000620466 ANKRD20A1Q5TYW2 823 aa8.85□□□□□ -0.99
ALMS1-208ENST00000620466 SYDE1Q6ZW31 735 aaPredicted RBP8.85□□□□□ -0.99
ALMS1-208ENST00000620466 LRRC37BQ96QE4 947 aa8.85□□□□□ -0.99
ALMS1-208ENST00000620466 RUSC1Q9BVN2 902 aa8.85□□□□□ -0.99
ALMS1-208ENST00000620466 INTS13Q9NVM9 706 aa8.85□□□□□ -0.99
ALMS1-208ENST00000620466 DDX56Q9NY93 547 aaKnown RBP8.85□□□□□ -0.99
ALMS1-208ENST00000620466 SLIT3O75094 1523 aa8.85□□□□□ -0.99
ALMS1-208ENST00000620466 FMN2Q9NZ56 1722 aa8.85□□□□□ -0.99
ALMS1-208ENST00000620466 A0A087X0T9 212 aa8.85□□□□□ -0.99
ALMS1-208ENST00000620466 FAM228BP0C875 321 aa8.85□□□□□ -0.99
ALMS1-208ENST00000620466 KITP10721 976 aa8.85□□□□□ -0.99
ALMS1-208ENST00000620466 NCF2P19878 526 aaPredicted RBP8.85□□□□□ -0.99
ALMS1-208ENST00000620466 COMTP21964 271 aa8.85□□□□□ -0.99
ALMS1-208ENST00000620466 RPA1P27694 616 aa8.85□□□□□ -0.99
ALMS1-208ENST00000620466 MKRN4PQ13434 485 aaPredicted RBP8.85□□□□□ -0.99
ALMS1-208ENST00000620466 THEM5Q8N1Q8 247 aa8.85□□□□□ -0.99
ALMS1-208ENST00000620466 TTC13Q8NBP0 860 aa8.85□□□□□ -0.99
ALMS1-208ENST00000620466 PARVAQ9NVD7 372 aa8.85□□□□□ -0.99
ALMS1-208ENST00000620466 DDX52Q9Y2R4 599 aaKnown RBP eCLIP8.85□□□□□ -0.99
ALMS1-208ENST00000620466 RIC1Q4ADV7 1423 aa8.85□□□□□ -0.99
ALMS1-208ENST00000620466 GYG2O15488 501 aa8.85□□□□□ -0.99
ALMS1-208ENST00000620466 BNIP3LO60238 219 aa8.85□□□□□ -0.99
ALMS1-208ENST00000620466 TFRCP02786 760 aaKnown RBP8.85□□□□□ -0.99
ALMS1-208ENST00000620466 SKIP12755 728 aa8.85□□□□□ -0.99
ALMS1-208ENST00000620466 CYP11B2P19099 503 aa8.85□□□□□ -0.99
ALMS1-208ENST00000620466 ARSEP51690 589 aa8.85□□□□□ -0.99
ALMS1-208ENST00000620466 PPP4CP60510 307 aa8.85□□□□□ -0.99
ALMS1-208ENST00000620466 TMPRSS15P98073 1019 aa8.85□□□□□ -0.99
ALMS1-208ENST00000620466 RWDD4Q6NW29 188 aaKnown RBP8.85□□□□□ -0.99
ALMS1-208ENST00000620466 KIAA0895Q8NCT3 520 aa8.85□□□□□ -0.99
ALMS1-208ENST00000620466 CDC26Q8NHZ8 85 aa8.85□□□□□ -0.99
ALMS1-208ENST00000620466 SPATS2LQ9NUQ6 558 aaKnown RBP8.85□□□□□ -0.99
ALMS1-208ENST00000620466 DCTN4Q9UJW0 460 aa8.85□□□□□ -0.99
ALMS1-208ENST00000620466 PNMA3Q9UL41 463 aa8.85□□□□□ -0.99
Retrieved 100 of 20,778 RNA–protein pairs in 28.2 ms