RNA–Protein interactions for RNA: ENST00000620429.4

VPS11-207, Transcript of VPS11, CORVET/HOPS core subunit, humanhuman

TSL 5 BASIC

Gene VPS11, Length 2,739 nt, Biotype protein coding.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
VPS11-207ENST00000620429 YARSP54577 528 aaKnown RBP11.07□□□□□ -0.64
VPS11-207ENST00000620429 ASIC1P78348 528 aa11.07□□□□□ -0.64
VPS11-207ENST00000620429 STK4Q13043 487 aa11.07□□□□□ -0.64
VPS11-207ENST00000620429 ASTE1Q2TB18 679 aaPredicted RBP11.07□□□□□ -0.64
VPS11-207ENST00000620429 EAPPQ56P03 285 aaPredicted RBP11.07□□□□□ -0.64
VPS11-207ENST00000620429 CGB2Q6NT52 195 aa11.07□□□□□ -0.64
VPS11-207ENST00000620429 B3GNT6Q6ZMB0 384 aa11.07□□□□□ -0.64
VPS11-207ENST00000620429 VSIG1Q86XK7 387 aa11.07□□□□□ -0.64
VPS11-207ENST00000620429 ZBED8Q8IZ13 594 aa11.07□□□□□ -0.64
VPS11-207ENST00000620429 CKAP2Q8WWK9 683 aa11.07□□□□□ -0.64
VPS11-207ENST00000620429 GPKOWQ92917 476 aaPredicted RBP eCLIP11.07□□□□□ -0.64
VPS11-207ENST00000620429 NSUN4Q96CB9 384 aaKnown RBP11.07□□□□□ -0.64
VPS11-207ENST00000620429 KRT82Q9NSB4 513 aa11.07□□□□□ -0.64
VPS11-207ENST00000620429 ARFGEF1Q9Y6D6 1849 aa11.07□□□□□ -0.64
VPS11-207ENST00000620429 CACNA1SQ13698 1873 aa11.06□□□□□ -0.64
VPS11-207ENST00000620429 USP17L12C9JPN9 530 aa11.06□□□□□ -0.64
VPS11-207ENST00000620429 USP17L21D6R901 530 aa11.06□□□□□ -0.64
VPS11-207ENST00000620429 RBAK-RBAKDNI3L0D1 243 aa11.06□□□□□ -0.64
VPS11-207ENST00000620429 MAGEB3O15480 346 aa11.06□□□□□ -0.64
VPS11-207ENST00000620429 TBC1D12O60347 775 aa11.06□□□□□ -0.64
VPS11-207ENST00000620429 GSTT2P0CG29 244 aa11.06□□□□□ -0.64
VPS11-207ENST00000620429 GSTT2BP0CG30 244 aa11.06□□□□□ -0.64
VPS11-207ENST00000620429 FCER1AP12319 257 aa11.06□□□□□ -0.64
VPS11-207ENST00000620429 CAMK2BQ13554 666 aa11.06□□□□□ -0.64
VPS11-207ENST00000620429 NFIXQ14938 502 aa11.06□□□□□ -0.64
VPS11-207ENST00000620429 RRAGAQ7L523 313 aa11.06□□□□□ -0.64
VPS11-207ENST00000620429 GET4Q7L5D6 327 aaPredicted RBP11.06□□□□□ -0.64
VPS11-207ENST00000620429 PALB2Q86YC2 1186 aa11.06□□□□□ -0.64
VPS11-207ENST00000620429 ZSCAN29Q8IWY8 852 aaPredicted RBP11.06□□□□□ -0.64
VPS11-207ENST00000620429 SRPK1Q96SB4 655 aaKnown RBP11.06□□□□□ -0.64
VPS11-207ENST00000620429 FMO2Q99518 471 aa11.06□□□□□ -0.64
VPS11-207ENST00000620429 SAP30BPQ9UHR5 308 aaKnown RBP11.06□□□□□ -0.64
VPS11-207ENST00000620429 HAO1Q9UJM8 370 aa11.06□□□□□ -0.64
VPS11-207ENST00000620429 FAM32AQ9Y421 112 aaKnown RBP11.06□□□□□ -0.64
VPS11-207ENST00000620429 NR2E3Q9Y5X4 410 aa11.06□□□□□ -0.64
VPS11-207ENST00000620429 CAPN9O14815 690 aa11.06□□□□□ -0.64
VPS11-207ENST00000620429 HNRNPCL1O60812 293 aaKnown RBP11.06□□□□□ -0.64
VPS11-207ENST00000620429 TARSP26639 723 aaKnown RBP11.06□□□□□ -0.64
VPS11-207ENST00000620429 POLGP54098 1239 aaPredicted RBP11.06□□□□□ -0.64
VPS11-207ENST00000620429 PMS2P54278 862 aa11.06□□□□□ -0.64
VPS11-207ENST00000620429 MAP3K10Q02779 954 aa11.06□□□□□ -0.64
VPS11-207ENST00000620429 MTFR1Q15390 333 aa11.06□□□□□ -0.64
VPS11-207ENST00000620429 GRIK5Q16478 980 aa11.06□□□□□ -0.64
VPS11-207ENST00000620429 FAM47AQ5JRC9 791 aa11.06□□□□□ -0.64
VPS11-207ENST00000620429 Q6ZNX1 250 aa11.06□□□□□ -0.64
VPS11-207ENST00000620429 RSPH3Q86UC2 560 aa11.06□□□□□ -0.64
VPS11-207ENST00000620429 TREML1Q86YW5 311 aa11.06□□□□□ -0.64
VPS11-207ENST00000620429 KBTBD2Q8IY47 623 aa11.06□□□□□ -0.64
VPS11-207ENST00000620429 NUP93Q8N1F7 819 aa11.06□□□□□ -0.64
VPS11-207ENST00000620429 SYT2Q8N9I0 419 aaPredicted RBP11.06□□□□□ -0.64
VPS11-207ENST00000620429 SCAIQ8N9R8 606 aa11.06□□□□□ -0.64
VPS11-207ENST00000620429 LRRC15Q8TF66 581 aa11.06□□□□□ -0.64
VPS11-207ENST00000620429 ZMAT2Q96NC0 199 aaKnown RBP11.06□□□□□ -0.64
VPS11-207ENST00000620429 CCSER1Q9C0I3 900 aa11.06□□□□□ -0.64
VPS11-207ENST00000620429 KIAA1683Q9H0B3 1180 aa11.06□□□□□ -0.64
VPS11-207ENST00000620429 ZMYND12Q9H0C1 365 aa11.06□□□□□ -0.64
VPS11-207ENST00000620429 UBAP1Q9NZ09 502 aa11.06□□□□□ -0.64
VPS11-207ENST00000620429 HEY1Q9Y5J3 304 aa11.06□□□□□ -0.64
VPS11-207ENST00000620429 A0A1B0GUL6 1792 aa11.05□□□□□ -0.64
VPS11-207ENST00000620429 LRRC53A6NM62 1247 aa11.05□□□□□ -0.64
VPS11-207ENST00000620429 IQCJ-SCHIP1C9J366 451 aaPredicted RBP11.05□□□□□ -0.64
VPS11-207ENST00000620429 E9PBE3 544 aa11.05□□□□□ -0.64
VPS11-207ENST00000620429 TBX10O75333 385 aa11.05□□□□□ -0.64
VPS11-207ENST00000620429 T-ENOLP0DO92 83 aa11.05□□□□□ -0.64
VPS11-207ENST00000620429 VDRP11473 427 aa11.05□□□□□ -0.64
VPS11-207ENST00000620429 PLCG1P19174 1290 aa11.05□□□□□ -0.64
VPS11-207ENST00000620429 S100A1P23297 94 aa11.05□□□□□ -0.64
VPS11-207ENST00000620429 PTPN4P29074 926 aa11.05□□□□□ -0.64
VPS11-207ENST00000620429 HOXD11P31277 338 aaPredicted RBP11.05□□□□□ -0.64
VPS11-207ENST00000620429 CCT8P50990 548 aa11.05□□□□□ -0.64
VPS11-207ENST00000620429 NAB2Q15742 525 aa11.05□□□□□ -0.64
VPS11-207ENST00000620429 CERKLQ49MI3 558 aaPredicted RBP11.05□□□□□ -0.64
VPS11-207ENST00000620429 DENND2CQ68D51 928 aa11.05□□□□□ -0.64
VPS11-207ENST00000620429 PEX5LQ8IYB4 626 aa11.05□□□□□ -0.64
VPS11-207ENST00000620429 BBS5Q8N3I7 341 aa11.05□□□□□ -0.64
VPS11-207ENST00000620429 DDX55Q8NHQ9 600 aaKnown RBP eCLIP11.05□□□□□ -0.64
VPS11-207ENST00000620429 NMD3Q96D46 503 aaKnown RBP11.05□□□□□ -0.64
VPS11-207ENST00000620429 ITPKCQ96DU7 683 aa11.05□□□□□ -0.64
VPS11-207ENST00000620429 TRIM11Q96F44 468 aa11.05□□□□□ -0.64
VPS11-207ENST00000620429 DUOX1Q9NRD9 1551 aa11.05□□□□□ -0.64
VPS11-207ENST00000620429 SSU72P8A0A1W2PR75 194 aa11.05□□□□□ -0.64
VPS11-207ENST00000620429 MATN2O00339 956 aa11.05□□□□□ -0.64
VPS11-207ENST00000620429 PSMG1O95456 288 aa11.05□□□□□ -0.64
VPS11-207ENST00000620429 FTCDO95954 541 aa11.05□□□□□ -0.64
VPS11-207ENST00000620429 ADRA2BP18089 450 aa11.05□□□□□ -0.64
VPS11-207ENST00000620429 NFKBIAP25963 317 aa11.05□□□□□ -0.64
VPS11-207ENST00000620429 GTF2H1P32780 548 aa11.05□□□□□ -0.64
VPS11-207ENST00000620429 TCF7P36402 384 aaPredicted RBP11.05□□□□□ -0.64
VPS11-207ENST00000620429 GFPT1Q06210 699 aaPredicted RBP11.05□□□□□ -0.64
VPS11-207ENST00000620429 VWA3BQ502W6 1294 aa11.05□□□□□ -0.64
VPS11-207ENST00000620429 TRAPPC3LQ5T215 181 aa11.05□□□□□ -0.64
VPS11-207ENST00000620429 MFSD5Q6N075 450 aa11.05□□□□□ -0.64
VPS11-207ENST00000620429 KLHL35Q6PF15 583 aa11.05□□□□□ -0.64
VPS11-207ENST00000620429 TRIM67Q6ZTA4 783 aa11.05□□□□□ -0.64
VPS11-207ENST00000620429 CABP7Q86V35 215 aa11.05□□□□□ -0.64
VPS11-207ENST00000620429 HPS3Q969F9 1004 aa11.05□□□□□ -0.64
VPS11-207ENST00000620429 TRIM9Q9C026 710 aa11.05□□□□□ -0.64
VPS11-207ENST00000620429 PCDHA4Q9UN74 947 aa11.05□□□□□ -0.64
VPS11-207ENST00000620429 SIK3Q9Y2K2 1263 aa11.05□□□□□ -0.64
VPS11-207ENST00000620429 BRCA1P38398 1863 aaKnown RBP11.05□□□□□ -0.64
Retrieved 100 of 20,778 RNA–protein pairs in 39.5 ms