RNA–Protein interactions for RNA: ENST00000618621.4

LPP-221, Transcript of LIM domain containing preferred translocation partner in lipoma, humanhuman

TSL 1 (best) BASIC

Gene LPP, Length 18,277 nt, Biotype protein coding, Subcellular localisation Cytosol, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
LPP-221ENST00000618621 ABTB1Q969K4 478 aaPredicted RBP3.23□□□□□ -1.89
LPP-221ENST00000618621 MRGBPQ9NV56 204 aa3.23□□□□□ -1.89
LPP-221ENST00000618621 CHCHD3Q9NX63 227 aaKnown RBP3.23□□□□□ -1.89
LPP-221ENST00000618621 KLF15Q9UIH9 416 aa3.23□□□□□ -1.89
LPP-221ENST00000618621 TCHHQ07283 1943 aa3.23□□□□□ -1.89
LPP-221ENST00000618621 ABCC12Q96J65 1359 aa3.23□□□□□ -1.89
LPP-221ENST00000618621 EYA4O95677 639 aa3.23□□□□□ -1.89
LPP-221ENST00000618621 APOA1P02647 267 aa3.23□□□□□ -1.89
LPP-221ENST00000618621 MMP10P09238 476 aa3.23□□□□□ -1.89
LPP-221ENST00000618621 KLK7P49862 253 aa3.23□□□□□ -1.89
LPP-221ENST00000618621 PDZD8Q8NEN9 1154 aa3.23□□□□□ -1.89
LPP-221ENST00000618621 FAM167AQ96KS9 214 aa3.23□□□□□ -1.89
LPP-221ENST00000618621 CCNL2Q96S94 520 aaPredicted RBP3.23□□□□□ -1.89
LPP-221ENST00000618621 ALG13Q9NP73 1137 aaKnown RBP3.23□□□□□ -1.89
LPP-221ENST00000618621 PACSIN2Q9UNF0 486 aaPredicted RBP3.23□□□□□ -1.89
LPP-221ENST00000618621 LRRC53A6NM62 1247 aa3.23□□□□□ -1.89
LPP-221ENST00000618621 APOL1O14791 398 aa3.23□□□□□ -1.89
LPP-221ENST00000618621 LDHAP00338 332 aaKnown RBP3.23□□□□□ -1.89
LPP-221ENST00000618621 GLI1P08151 1106 aa3.23□□□□□ -1.89
LPP-221ENST00000618621 CNGA3Q16281 694 aa3.23□□□□□ -1.89
LPP-221ENST00000618621 MFSD4BQ5TF39 518 aa3.23□□□□□ -1.89
LPP-221ENST00000618621 C16orf89Q6UX73 402 aa3.23□□□□□ -1.89
LPP-221ENST00000618621 C7orf31Q8N865 590 aa3.23□□□□□ -1.89
LPP-221ENST00000618621 DYDC2Q96IM9 177 aa3.23□□□□□ -1.89
LPP-221ENST00000618621 MROH7-TTC4A0A0A0MT08 1334 aa3.23□□□□□ -1.89
LPP-221ENST00000618621 TBX3O15119 743 aa3.23□□□□□ -1.89
LPP-221ENST00000618621 GHRP10912 638 aa3.23□□□□□ -1.89
LPP-221ENST00000618621 ITKQ08881 620 aa3.23□□□□□ -1.89
LPP-221ENST00000618621 TAF1BQ53T94 588 aaPredicted RBP3.23□□□□□ -1.89
LPP-221ENST00000618621 CYFIP1Q7L576 1253 aa3.23□□□□□ -1.89
LPP-221ENST00000618621 WDR75Q8IWA0 830 aaKnown RBP3.23□□□□□ -1.89
LPP-221ENST00000618621 RNF25Q96BH1 459 aaPredicted RBP3.23□□□□□ -1.89
LPP-221ENST00000618621 FAM84BQ96KN1 310 aaPredicted RBP3.23□□□□□ -1.89
LPP-221ENST00000618621 FGD4Q96M96 766 aa3.23□□□□□ -1.89
LPP-221ENST00000618621 SH3GL3Q99963 347 aa3.23□□□□□ -1.89
LPP-221ENST00000618621 PCIF1Q9H4Z3 704 aa3.23□□□□□ -1.89
LPP-221ENST00000618621 CNOT7Q9UIV1 285 aaKnown RBP3.23□□□□□ -1.89
LPP-221ENST00000618621 AP3B1O00203 1094 aa3.23□□□□□ -1.89
LPP-221ENST00000618621 PDXKO00764 312 aa3.23□□□□□ -1.89
LPP-221ENST00000618621 OCA2Q04671 838 aa3.23□□□□□ -1.89
LPP-221ENST00000618621 PDK1Q15118 436 aa3.23□□□□□ -1.89
LPP-221ENST00000618621 TTC30AQ86WT1 665 aa3.23□□□□□ -1.89
LPP-221ENST00000618621 KIRREL3Q8IZU9 778 aa3.23□□□□□ -1.89
LPP-221ENST00000618621 MCPH1Q8NEM0 835 aa3.23□□□□□ -1.89
LPP-221ENST00000618621 TEX12Q9BXU0 123 aa3.23□□□□□ -1.89
LPP-221ENST00000618621 REXO2Q9Y3B8 237 aaKnown RBP3.23□□□□□ -1.89
LPP-221ENST00000618621 CDK12Q9NYV4 1490 aaPredicted RBP3.23□□□□□ -1.89
LPP-221ENST00000618621 CACNA1BQ00975 2339 aa3.23□□□□□ -1.89
LPP-221ENST00000618621 RASA4BC9J798 803 aa3.23□□□□□ -1.89
LPP-221ENST00000618621 E7ENQ6 273 aa3.23□□□□□ -1.89
LPP-221ENST00000618621 RASA4O43374 803 aa3.23□□□□□ -1.89
LPP-221ENST00000618621 SYF2O95926 243 aaKnown RBP3.23□□□□□ -1.89
LPP-221ENST00000618621 PLEKP08567 350 aaPredicted RBP3.23□□□□□ -1.89
LPP-221ENST00000618621 NPR1P16066 1061 aa3.23□□□□□ -1.89
LPP-221ENST00000618621 PEX3P56589 373 aa3.23□□□□□ -1.89
LPP-221ENST00000618621 BASP1P80723 227 aaKnown RBP3.23□□□□□ -1.89
LPP-221ENST00000618621 CCDC137Q6PK04 289 aaKnown RBP3.23□□□□□ -1.89
LPP-221ENST00000618621 SESTD1Q86VW0 696 aa3.23□□□□□ -1.89
LPP-221ENST00000618621 FAM193BQ96PV7 902 aaPredicted RBP3.23□□□□□ -1.89
LPP-221ENST00000618621 AP5M1Q9H0R1 490 aa3.23□□□□□ -1.89
LPP-221ENST00000618621 DCP1AQ9NPI6 582 aaPredicted RBP3.23□□□□□ -1.89
LPP-221ENST00000618621 WHRNQ9P202 907 aa3.23□□□□□ -1.89
LPP-221ENST00000618621 ITGB1BP2Q9UKP3 347 aa3.23□□□□□ -1.89
LPP-221ENST00000618621 ABCA5Q8WWZ7 1642 aa3.23□□□□□ -1.89
LPP-221ENST00000618621 WDR64B1ANS9 1081 aa3.23□□□□□ -1.89
LPP-221ENST00000618621 KRT14P02533 472 aa3.23□□□□□ -1.89
LPP-221ENST00000618621 GPC3P51654 580 aa3.23□□□□□ -1.89
LPP-221ENST00000618621 IGBP1P78318 339 aa3.23□□□□□ -1.89
LPP-221ENST00000618621 CEP55Q53EZ4 464 aa3.23□□□□□ -1.89
LPP-221ENST00000618621 ZNF564Q8TBZ8 553 aaPredicted RBP3.23□□□□□ -1.89
LPP-221ENST00000618621 CCDC124Q96CT7 223 aaKnown RBP3.23□□□□□ -1.89
LPP-221ENST00000618621 TRABDQ9H4I3 376 aa3.23□□□□□ -1.89
LPP-221ENST00000618621 TMA7Q9Y2S6 64 aaKnown RBP3.23□□□□□ -1.89
LPP-221ENST00000618621 HEG1Q9ULI3 1381 aa3.23□□□□□ -1.89
LPP-221ENST00000618621 PITPNM2Q9BZ72 1349 aa3.23□□□□□ -1.89
LPP-221ENST00000618621 FAM47DPA6NHR8 397 aa3.23□□□□□ -1.89
LPP-221ENST00000618621 P4HA2O15460 535 aa3.23□□□□□ -1.89
LPP-221ENST00000618621 LRRN2O75325 713 aa3.23□□□□□ -1.89
LPP-221ENST00000618621 RHOBTB3O94955 611 aa3.23□□□□□ -1.89
LPP-221ENST00000618621 KRT1P04264 644 aa3.23□□□□□ -1.89
LPP-221ENST00000618621 PAMP19021 973 aa3.23□□□□□ -1.89
LPP-221ENST00000618621 AP1B1Q10567 949 aa3.23□□□□□ -1.89
LPP-221ENST00000618621 NSUN6Q8TEA1 469 aaKnown RBP3.23□□□□□ -1.89
LPP-221ENST00000618621 DHX38Q92620 1227 aaKnown RBP3.23□□□□□ -1.89
LPP-221ENST00000618621 MANSC1Q9H8J5 431 aa3.23□□□□□ -1.89
LPP-221ENST00000618621 PCDHB2Q9Y5E7 798 aa3.23□□□□□ -1.89
LPP-221ENST00000618621 CPDO75976 1380 aa3.23□□□□□ -1.89
LPP-221ENST00000618621 NEDD4P46934 1319 aa3.23□□□□□ -1.89
LPP-221ENST00000618621 RAD17O75943 681 aa3.23□□□□□ -1.89
LPP-221ENST00000618621 UCHL3P15374 230 aa3.23□□□□□ -1.89
LPP-221ENST00000618621 CHRNA5P30532 468 aa3.23□□□□□ -1.89
LPP-221ENST00000618621 STK4Q13043 487 aa3.23□□□□□ -1.89
LPP-221ENST00000618621 ITPK1Q13572 414 aa3.23□□□□□ -1.89
LPP-221ENST00000618621 SF3B3Q15393 1217 aaKnown RBP3.23□□□□□ -1.89
LPP-221ENST00000618621 SLC30A9Q6PML9 568 aa3.23□□□□□ -1.89
LPP-221ENST00000618621 DCLK2Q8N568 766 aa3.23□□□□□ -1.89
LPP-221ENST00000618621 TBRG4Q969Z0 631 aaKnown RBP eCLIP3.23□□□□□ -1.893e-6■■■■■ 31.8
LPP-221ENST00000618621 FAM213AQ9BRX8 229 aa3.23□□□□□ -1.89
LPP-221ENST00000618621 PHF20Q9BVI0 1012 aa3.23□□□□□ -1.89
LPP-221ENST00000618621 ANAPC7Q9UJX3 599 aa3.23□□□□□ -1.89
Retrieved 100 of 20,778 RNA–protein pairs in 30 ms