RNA–Protein interactions for RNA: ENST00000617930.1

CNOT3-209, Transcript of CCR4-NOT transcription complex subunit 3, humanhuman

TSL 2

Gene CNOT3, Length 2,047 nt, Biotype retained intron, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CNOT3-209ENST00000617930 GALCP54803 685 aa18.92■□□□□ 0.62
CNOT3-209ENST00000617930 NLRP11P59045 1033 aaKnown RBP18.92■□□□□ 0.62
CNOT3-209ENST00000617930 MEI1Q5TIA1 1274 aa18.92■□□□□ 0.62
CNOT3-209ENST00000617930 KRT39Q6A163 491 aa18.92■□□□□ 0.62
CNOT3-209ENST00000617930 LRRC57Q8N9N7 239 aa18.92■□□□□ 0.62
CNOT3-209ENST00000617930 TMC2Q8TDI7 906 aa18.92■□□□□ 0.62
CNOT3-209ENST00000617930 TMEM8AQ9HCN3 771 aa18.92■□□□□ 0.62
CNOT3-209ENST00000617930 PDE11AQ9HCR9 933 aa18.92■□□□□ 0.62
CNOT3-209ENST00000617930 RNF216Q9NWF9 866 aaPredicted RBP18.92■□□□□ 0.62
CNOT3-209ENST00000617930 LRRIQ4A6NIV6 560 aa18.91■□□□□ 0.62
CNOT3-209ENST00000617930 TMCO5BA8MYB1 307 aa18.91■□□□□ 0.62
CNOT3-209ENST00000617930 C2orf54Q08AI8 447 aa18.91■□□□□ 0.62
CNOT3-209ENST00000617930 PRPF4BQ13523 1007 aaKnown RBP18.91■□□□□ 0.62
CNOT3-209ENST00000617930 LMBRD2Q68DH5 695 aaPredicted RBP18.91■□□□□ 0.62
CNOT3-209ENST00000617930 PSPC1Q8WXF1 523 aaKnown RBP18.91■□□□□ 0.62
CNOT3-209ENST00000617930 BICD1Q96G01 975 aa18.91■□□□□ 0.62
CNOT3-209ENST00000617930 HHIPL1Q96JK4 782 aa18.91■□□□□ 0.62
CNOT3-209ENST00000617930 TARS2Q9BW92 718 aaKnown RBP18.91■□□□□ 0.62
CNOT3-209ENST00000617930 ARHGAP39Q9C0H5 1083 aa18.91■□□□□ 0.62
CNOT3-209ENST00000617930 NRBP2Q9NSY0 501 aa18.91■□□□□ 0.62
CNOT3-209ENST00000617930 HYOU1Q9Y4L1 999 aa18.91■□□□□ 0.62
CNOT3-209ENST00000617930 DLATP10515 647 aaKnown RBP18.91■□□□□ 0.62
CNOT3-209ENST00000617930 ACOT2P49753 483 aa18.91■□□□□ 0.62
CNOT3-209ENST00000617930 INHBEP58166 350 aa18.91■□□□□ 0.62
CNOT3-209ENST00000617930 CKAP4Q07065 602 aaKnown RBP18.91■□□□□ 0.62
CNOT3-209ENST00000617930 PRAMEF19Q5SWL8 479 aa18.91■□□□□ 0.62
CNOT3-209ENST00000617930 C15orf39Q6ZRI6 1047 aa18.91■□□□□ 0.62
CNOT3-209ENST00000617930 PAXIP1Q6ZW49 1069 aaPredicted RBP18.91■□□□□ 0.62
CNOT3-209ENST00000617930 ZNF572Q7Z3I7 529 aaPredicted RBP18.91■□□□□ 0.62
CNOT3-209ENST00000617930 PRPF31Q8WWY3 499 aaKnown RBP18.91■□□□□ 0.62
CNOT3-209ENST00000617930 TATDN2Q93075 761 aa18.91■□□□□ 0.62
CNOT3-209ENST00000617930 SPATA33Q96N06 139 aa18.91■□□□□ 0.62
CNOT3-209ENST00000617930 MPHOSPH6Q99547 160 aaKnown RBP18.91■□□□□ 0.62
CNOT3-209ENST00000617930 TINF2Q9BSI4 451 aa18.91■□□□□ 0.62
CNOT3-209ENST00000617930 LUC7LQ9NQ29 371 aaKnown RBP18.91■□□□□ 0.62
CNOT3-209ENST00000617930 GJD2Q9UKL4 321 aa18.91■□□□□ 0.62
CNOT3-209ENST00000617930 MGAMO43451 1857 aa18.91■□□□□ 0.62
CNOT3-209ENST00000617930 SGPL1O95470 568 aa18.9■□□□□ 0.62
CNOT3-209ENST00000617930 PIGRP01833 764 aa18.9■□□□□ 0.62
CNOT3-209ENST00000617930 CHRNB2P17787 502 aa18.9■□□□□ 0.62
CNOT3-209ENST00000617930 RFX1P22670 979 aa18.9■□□□□ 0.62
CNOT3-209ENST00000617930 RFC5P40937 340 aa18.9■□□□□ 0.62
CNOT3-209ENST00000617930 LIG4P49917 911 aa18.9■□□□□ 0.62
CNOT3-209ENST00000617930 GPC3P51654 580 aa18.9■□□□□ 0.62
CNOT3-209ENST00000617930 MAP2K5Q13163 448 aa18.9■□□□□ 0.62
CNOT3-209ENST00000617930 PLCB4Q15147 1175 aa18.9■□□□□ 0.62
CNOT3-209ENST00000617930 PTPROQ16827 1216 aa18.9■□□□□ 0.62
CNOT3-209ENST00000617930 FAM160B1Q5W0V3 765 aa18.9■□□□□ 0.62
CNOT3-209ENST00000617930 DHX37Q8IY37 1157 aaKnown RBP18.9■□□□□ 0.62
CNOT3-209ENST00000617930 SCFD2Q8WU76 684 aa18.9■□□□□ 0.62
CNOT3-209ENST00000617930 TRAPPC12Q8WVT3 735 aa18.9■□□□□ 0.62
CNOT3-209ENST00000617930 PI4K2AQ9BTU6 479 aa18.9■□□□□ 0.62
CNOT3-209ENST00000617930 ACBD3Q9H3P7 528 aa18.9■□□□□ 0.62
CNOT3-209ENST00000617930 VTA1Q9NP79 307 aa18.9■□□□□ 0.62
CNOT3-209ENST00000617930 L1RE1Q9UN81 338 aa18.9■□□□□ 0.62
CNOT3-209ENST00000617930 HTTP42858 3142 aa18.9■□□□□ 0.62
CNOT3-209ENST00000617930 K7ERI5 159 aa18.9■□□□□ 0.62
CNOT3-209ENST00000617930 EXTL3O43909 919 aa18.9■□□□□ 0.62
CNOT3-209ENST00000617930 H2AFZP0C0S5 128 aa18.9■□□□□ 0.62
CNOT3-209ENST00000617930 CLDN10P78369 228 aa18.9■□□□□ 0.62
CNOT3-209ENST00000617930 IRX5P78411 483 aaPredicted RBP18.9■□□□□ 0.62
CNOT3-209ENST00000617930 CETN1Q12798 172 aa18.9■□□□□ 0.62
CNOT3-209ENST00000617930 TTLL4Q14679 1199 aa18.9■□□□□ 0.62
CNOT3-209ENST00000617930 SEZ6Q53EL9 994 aa18.9■□□□□ 0.62
CNOT3-209ENST00000617930 H2AFVQ71UI9 128 aa18.9■□□□□ 0.62
CNOT3-209ENST00000617930 FAM71AQ8IYT1 594 aa18.9■□□□□ 0.62
CNOT3-209ENST00000617930 LRRC71Q8N4P6 559 aa18.9■□□□□ 0.62
CNOT3-209ENST00000617930 TPCN2Q8NHX9 752 aa18.9■□□□□ 0.62
CNOT3-209ENST00000617930 DEPTORQ8TB45 409 aa18.9■□□□□ 0.62
CNOT3-209ENST00000617930 GLG1Q92896 1179 aa18.9■□□□□ 0.62
CNOT3-209ENST00000617930 ARHGEF26Q96DR7 871 aa18.9■□□□□ 0.62
CNOT3-209ENST00000617930 PCDHB18PQ96TA0 734 aa18.9■□□□□ 0.62
CNOT3-209ENST00000617930 AGPAT1Q99943 283 aa18.9■□□□□ 0.62
CNOT3-209ENST00000617930 SUGCTQ9HAC7 445 aa18.9■□□□□ 0.62
CNOT3-209ENST00000617930 OSGEPQ9NPF4 335 aa18.9■□□□□ 0.62
CNOT3-209ENST00000617930 RAB20Q9NX57 234 aa18.9■□□□□ 0.62
CNOT3-209ENST00000617930 IGKV6-21A0A0C4DH24 114 aa18.89■□□□□ 0.61
CNOT3-209ENST00000617930 ADCY3O60266 1144 aa18.89■□□□□ 0.61
CNOT3-209ENST00000617930 IGHA2P01877 340 aa18.89■□□□□ 0.61
CNOT3-209ENST00000617930 GJB1P08034 283 aa18.89■□□□□ 0.61
CNOT3-209ENST00000617930 SMPD1P17405 629 aa18.89■□□□□ 0.61
CNOT3-209ENST00000617930 TCP1P17987 556 aaKnown RBP18.89■□□□□ 0.61
CNOT3-209ENST00000617930 DNA2P51530 1060 aa18.89■□□□□ 0.61
CNOT3-209ENST00000617930 SREBF2Q12772 1141 aa18.89■□□□□ 0.61
CNOT3-209ENST00000617930 WDR93Q6P2C0 686 aa18.89■□□□□ 0.61
CNOT3-209ENST00000617930 KCNV1Q6PIU1 500 aa18.89■□□□□ 0.61
CNOT3-209ENST00000617930 NOP9Q86U38 636 aaKnown RBP18.89■□□□□ 0.61
CNOT3-209ENST00000617930 PPM1KQ8N3J5 372 aa18.89■□□□□ 0.61
CNOT3-209ENST00000617930 MSL3Q8N5Y2 521 aaKnown RBP18.89■□□□□ 0.61
CNOT3-209ENST00000617930 CAGE1Q8TC20 777 aa18.89■□□□□ 0.61
CNOT3-209ENST00000617930 DHX38Q92620 1227 aaKnown RBP18.89■□□□□ 0.61
CNOT3-209ENST00000617930 ZFYVE28Q9HCC9 887 aa18.89■□□□□ 0.61
CNOT3-209ENST00000617930 NOCTQ9UK39 431 aaKnown RBP18.89■□□□□ 0.61
CNOT3-209ENST00000617930 DAAM1Q9Y4D1 1078 aa18.89■□□□□ 0.61
CNOT3-209ENST00000617930 ZNF233A6NK53 670 aa18.88■□□□□ 0.61
CNOT3-209ENST00000617930 MCM3P25205 808 aa18.88■□□□□ 0.61
CNOT3-209ENST00000617930 GYS2P54840 703 aa18.88■□□□□ 0.61
CNOT3-209ENST00000617930 MRPS25P82663 173 aaKnown RBP18.88■□□□□ 0.61
CNOT3-209ENST00000617930 CASP8Q14790 479 aa18.88■□□□□ 0.61
CNOT3-209ENST00000617930 SLC47A2Q86VL8 602 aa18.88■□□□□ 0.61
Retrieved 100 of 20,778 RNA–protein pairs in 29 ms