RNA–Protein interactions for RNA: ENST00000617456.1

GPC6-202, Transcript of glypican 6, humanhuman

TSL 3 BASIC

Gene GPC6, Length 792 nt, Biotype protein coding, Subcellular localisation Cytoplasm, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
GPC6-202ENST00000617456 NCAPGQ9BPX3 1015 aa9.49□□□□□ -0.89
GPC6-202ENST00000617456 CNTNAP3Q9BZ76 1288 aa9.49□□□□□ -0.89
GPC6-202ENST00000617456 BMP2KQ9NSY1 1161 aaPredicted RBP9.49□□□□□ -0.89
GPC6-202ENST00000617456 RYDENQ9NUL5 291 aaKnown RBP9.49□□□□□ -0.89
GPC6-202ENST00000617456 AGPAT5Q9NUQ2 364 aa9.49□□□□□ -0.89
GPC6-202ENST00000617456 MARCH5Q9NX47 278 aa9.49□□□□□ -0.89
GPC6-202ENST00000617456 DLGAP2Q9P1A6 1054 aa9.49□□□□□ -0.89
GPC6-202ENST00000617456 KANSL3Q9P2N6 904 aa9.49□□□□□ -0.89
GPC6-202ENST00000617456 DPP7Q9UHL4 492 aa9.49□□□□□ -0.89
GPC6-202ENST00000617456 SSX2IPQ9Y2D8 614 aa9.49□□□□□ -0.89
GPC6-202ENST00000617456 NUB1Q9Y5A7 615 aa9.49□□□□□ -0.89
GPC6-202ENST00000617456 NUMBLQ9Y6R0 609 aa9.49□□□□□ -0.89
GPC6-202ENST00000617456 WDR81Q562E7 1941 aa9.48□□□□□ -0.89
GPC6-202ENST00000617456 DNAH14Q0VDD8 3507 aa9.48□□□□□ -0.89
GPC6-202ENST00000617456 DOCK8Q8NF50 2099 aa9.48□□□□□ -0.89
GPC6-202ENST00000617456 ASAP2O43150 1006 aa9.48□□□□□ -0.89
GPC6-202ENST00000617456 KINO60870 393 aaKnown RBP9.48□□□□□ -0.89
GPC6-202ENST00000617456 BAG4O95429 457 aaKnown RBP9.48□□□□□ -0.89
GPC6-202ENST00000617456 CCDC172P0C7W6 258 aa9.48□□□□□ -0.89
GPC6-202ENST00000617456 XRCC6P12956 609 aaKnown RBP eCLIP9.48□□□□□ -0.89
GPC6-202ENST00000617456 LAMP2P13473 410 aa9.48□□□□□ -0.89
GPC6-202ENST00000617456 ITGA4P13612 1032 aa9.48□□□□□ -0.89
GPC6-202ENST00000617456 GLULP15104 373 aa9.48□□□□□ -0.89
GPC6-202ENST00000617456 RPL17P18621 184 aaKnown RBP9.48□□□□□ -0.89
GPC6-202ENST00000617456 POU5F1BQ06416 359 aa9.48□□□□□ -0.89
GPC6-202ENST00000617456 ORC2Q13416 577 aaPredicted RBP9.48□□□□□ -0.89
GPC6-202ENST00000617456 EPHA7Q15375 998 aa9.48□□□□□ -0.89
GPC6-202ENST00000617456 UBXN11Q5T124 520 aa9.48□□□□□ -0.89
GPC6-202ENST00000617456 KIAA0319Q5VV43 1072 aa9.48□□□□□ -0.89
GPC6-202ENST00000617456 CYP26C1Q6V0L0 522 aa9.48□□□□□ -0.89
GPC6-202ENST00000617456 OTUD6AQ7L8S5 288 aa9.48□□□□□ -0.89
GPC6-202ENST00000617456 C4orf19Q8IY42 314 aa9.48□□□□□ -0.89
GPC6-202ENST00000617456 COLGALT2Q8IYK4 626 aa9.48□□□□□ -0.89
GPC6-202ENST00000617456 PJA1Q8NG27 643 aa9.48□□□□□ -0.89
GPC6-202ENST00000617456 GTF3C6Q969F1 213 aa9.48□□□□□ -0.89
GPC6-202ENST00000617456 TMEM143Q96AN5 459 aa9.48□□□□□ -0.89
GPC6-202ENST00000617456 GAD1Q99259 594 aa9.48□□□□□ -0.89
GPC6-202ENST00000617456 RPP25Q9BUL9 199 aaKnown RBP9.48□□□□□ -0.89
GPC6-202ENST00000617456 APOL6Q9BWW8 343 aa9.48□□□□□ -0.89
GPC6-202ENST00000617456 NT5C3AQ9H0P0 336 aa9.48□□□□□ -0.89
GPC6-202ENST00000617456 MINDY3Q9H8M7 445 aa9.48□□□□□ -0.89
GPC6-202ENST00000617456 IFT122Q9HBG6 1241 aa9.48□□□□□ -0.89
GPC6-202ENST00000617456 SPATA6Q9NWH7 488 aaPredicted RBP9.48□□□□□ -0.89
GPC6-202ENST00000617456 DLL3Q9NYJ7 618 aa9.48□□□□□ -0.89
GPC6-202ENST00000617456 NCDNQ9UBB6 729 aa9.48□□□□□ -0.89
GPC6-202ENST00000617456 ORC3Q9UBD5 711 aaPredicted RBP9.48□□□□□ -0.89
GPC6-202ENST00000617456 COL4A3BPQ9Y5P4 624 aa9.48□□□□□ -0.89
GPC6-202ENST00000617456 CNTNAP2Q9UHC6 1331 aa9.48□□□□□ -0.89
GPC6-202ENST00000617456 ANHXE9PGG2 379 aa9.47□□□□□ -0.89
GPC6-202ENST00000617456 TGM5O43548 720 aa9.47□□□□□ -0.89
GPC6-202ENST00000617456 CCNT1O60563 726 aaKnown RBP9.47□□□□□ -0.89
GPC6-202ENST00000617456 LYPLA2O95372 231 aa9.47□□□□□ -0.89
GPC6-202ENST00000617456 TDP2O95551 362 aa9.47□□□□□ -0.89
GPC6-202ENST00000617456 FSHRP23945 695 aa9.47□□□□□ -0.89
GPC6-202ENST00000617456 KRT2P35908 639 aa9.47□□□□□ -0.89
GPC6-202ENST00000617456 MLH1P40692 756 aa9.47□□□□□ -0.89
GPC6-202ENST00000617456 RFC5P40937 340 aa9.47□□□□□ -0.89
GPC6-202ENST00000617456 SCNN1GP51170 649 aa9.47□□□□□ -0.89
GPC6-202ENST00000617456 NPEPPSP55786 919 aa9.47□□□□□ -0.89
GPC6-202ENST00000617456 GPC5P78333 572 aa9.47□□□□□ -0.89
GPC6-202ENST00000617456 NTHL1P78549 312 aa9.47□□□□□ -0.89
GPC6-202ENST00000617456 CSTF1Q05048 431 aaKnown RBP9.47□□□□□ -0.89
GPC6-202ENST00000617456 STK3Q13188 491 aa9.47□□□□□ -0.89
GPC6-202ENST00000617456 SNW1Q13573 536 aaKnown RBP9.47□□□□□ -0.89
GPC6-202ENST00000617456 HTR4Q13639 388 aa9.47□□□□□ -0.89
GPC6-202ENST00000617456 UBXN2BQ14CS0 331 aa9.47□□□□□ -0.89
GPC6-202ENST00000617456 INF2Q27J81 1249 aa9.47□□□□□ -0.89
GPC6-202ENST00000617456 MAML2Q8IZL2 1156 aaPredicted RBP9.47□□□□□ -0.89
GPC6-202ENST00000617456 ZNF579Q8NAF0 562 aaKnown RBP9.47□□□□□ -0.89
GPC6-202ENST00000617456 SUMF1Q8NBK3 374 aa9.47□□□□□ -0.89
GPC6-202ENST00000617456 PRPF31Q8WWY3 499 aaKnown RBP9.47□□□□□ -0.89
GPC6-202ENST00000617456 SLC7A3Q8WY07 619 aa9.47□□□□□ -0.89
GPC6-202ENST00000617456 RABGGTAQ92696 567 aa9.47□□□□□ -0.89
GPC6-202ENST00000617456 SGSM3Q96HU1 749 aa9.47□□□□□ -0.89
GPC6-202ENST00000617456 LLPHQ9BRT6 129 aaKnown RBP9.47□□□□□ -0.89
GPC6-202ENST00000617456 EIF2AQ9BY44 585 aaKnown RBP9.47□□□□□ -0.89
GPC6-202ENST00000617456 RHOBTB2Q9BYZ6 727 aa9.47□□□□□ -0.89
GPC6-202ENST00000617456 PRKD2Q9BZL6 878 aa9.47□□□□□ -0.89
GPC6-202ENST00000617456 ZSWIM4Q9H7M6 989 aa9.47□□□□□ -0.89
GPC6-202ENST00000617456 RXFP1Q9HBX9 757 aa9.47□□□□□ -0.89
GPC6-202ENST00000617456 MIOSQ9NXC5 875 aa9.47□□□□□ -0.89
GPC6-202ENST00000617456 FAM120AQ9NZB2 1118 aaKnown RBP eCLIP9.47□□□□□ -0.89
GPC6-202ENST00000617456 VAV3Q9UKW4 847 aa9.47□□□□□ -0.89
GPC6-202ENST00000617456 HES2Q9Y543 173 aa9.47□□□□□ -0.89
GPC6-202ENST00000617456 ARL5CA6NH57 179 aa9.46□□□□□ -0.9
GPC6-202ENST00000617456 LAMTOR5O43504 91 aa9.46□□□□□ -0.9
GPC6-202ENST00000617456 NR1I2O75469 434 aa9.46□□□□□ -0.9
GPC6-202ENST00000617456 ERLIN2O94905 339 aa9.46□□□□□ -0.9
GPC6-202ENST00000617456 CTDNEP1O95476 244 aa9.46□□□□□ -0.9
GPC6-202ENST00000617456 NEFHP12036 1026 aa9.46□□□□□ -0.9
GPC6-202ENST00000617456 FDPSP14324 419 aaKnown RBP9.46□□□□□ -0.9
GPC6-202ENST00000617456 HOXA11P31270 313 aaPredicted RBP9.46□□□□□ -0.9
GPC6-202ENST00000617456 NEK4P51957 841 aa9.46□□□□□ -0.9
GPC6-202ENST00000617456 DSG1Q02413 1049 aa9.46□□□□□ -0.9
GPC6-202ENST00000617456 LAMTOR4Q0VGL1 99 aa9.46□□□□□ -0.9
GPC6-202ENST00000617456 TRIM29Q14134 588 aa9.46□□□□□ -0.9
GPC6-202ENST00000617456 ME3Q16798 604 aa9.46□□□□□ -0.9
GPC6-202ENST00000617456 VARS2Q5ST30 1063 aaKnown RBP9.46□□□□□ -0.9
GPC6-202ENST00000617456 PARM1Q6UWI2 310 aa9.46□□□□□ -0.9
GPC6-202ENST00000617456 ANO5Q75V66 913 aa9.46□□□□□ -0.9
Retrieved 100 of 20,778 RNA–protein pairs in 47.6 ms