RNA–Protein interactions for RNA: ENST00000617185.4

TP53-222, Transcript of tumor protein p53, human

TSL 1 (best) BASIC

Gene TP53, Length 2,724 nt, Biotype protein coding, Subcellular localisation Ribosome .

RNA		Protein				Prediction (catRAPID)		Interaction (ENCODE eCLIP)
Transcript Symbol	Ensembl Transcript ID	Gene	UniProt Accession	Length	Protein Status	Prediction Score	Prediction z-Score	p-Value	Fold Change
TP53-222	ENST00000617185	DYDC2	Q96IM9	177 aa		12.35	□□□□□ -0.43
TP53-222	ENST00000617185	NLRC4	Q9NPP4	1024 aa		12.35	□□□□□ -0.43
TP53-222	ENST00000617185	ZDHHC18	Q9NUE0	388 aa		12.35	□□□□□ -0.43
TP53-222	ENST00000617185	USP40	Q9NVE5	1235 aa		12.35	□□□□□ -0.43
TP53-222	ENST00000617185	BTBD7	Q9P203	1132 aa		12.35	□□□□□ -0.43
TP53-222	ENST00000617185	STX18	Q9P2W9	335 aa	Known RBP	12.35	□□□□□ -0.43
TP53-222	ENST00000617185	DAGLA	Q9Y4D2	1042 aa		12.35	□□□□□ -0.43
TP53-222	ENST00000617185	DYNC1LI1	Q9Y6G9	523 aa	Known RBP	12.35	□□□□□ -0.43
TP53-222	ENST00000617185	POR	P16435	677 aa	Predicted RBP	12.34	□□□□□ -0.43
TP53-222	ENST00000617185	SLCO1A2	P46721	670 aa		12.34	□□□□□ -0.43
TP53-222	ENST00000617185	GSTO1	P78417	241 aa		12.34	□□□□□ -0.43
TP53-222	ENST00000617185	ATP2C1	P98194	919 aa	Predicted RBP	12.34	□□□□□ -0.43
TP53-222	ENST00000617185	PFKFB3	Q16875	520 aa	Predicted RBP	12.34	□□□□□ -0.43
TP53-222	ENST00000617185	CCDC65	Q8IXS2	484 aa		12.34	□□□□□ -0.43
TP53-222	ENST00000617185	ZC3H12C	Q9C0D7	883 aa	Known RBP	12.34	□□□□□ -0.43
TP53-222	ENST00000617185	METTL5	Q9NRN9	209 aa	Known RBP	12.34	□□□□□ -0.43
TP53-222	ENST00000617185	ARHGEF38	Q9NXL2	777 aa		12.34	□□□□□ -0.43
TP53-222	ENST00000617185	DBR1	Q9UK59	544 aa	Known RBP	12.34	□□□□□ -0.43
TP53-222	ENST00000617185	UBR3	Q6ZT12	1888 aa		12.34	□□□□□ -0.43
TP53-222	ENST00000617185	HTR3E	A5X5Y0	456 aa		12.34	□□□□□ -0.43
TP53-222	ENST00000617185	HNRNPCL1	O60812	293 aa	Known RBP	12.34	□□□□□ -0.43
TP53-222	ENST00000617185	TBX10	O75333	385 aa		12.34	□□□□□ -0.43
TP53-222	ENST00000617185	RHOBTB3	O94955	611 aa		12.34	□□□□□ -0.43
TP53-222	ENST00000617185	ITGA4	P13612	1032 aa		12.34	□□□□□ -0.43
TP53-222	ENST00000617185	VWA3B	Q502W6	1294 aa		12.34	□□□□□ -0.43
TP53-222	ENST00000617185	TMEM53	Q6P2H8	277 aa		12.34	□□□□□ -0.43
TP53-222	ENST00000617185	ARHGAP27	Q6ZUM4	889 aa		12.34	□□□□□ -0.43
TP53-222	ENST00000617185	GPIHBP1	Q8IV16	184 aa		12.34	□□□□□ -0.43
TP53-222	ENST00000617185	DIS3L	Q8TF46	1054 aa	Known RBP	12.34	□□□□□ -0.43
TP53-222	ENST00000617185	CTNNBL1	Q8WYA6	563 aa	Predicted RBP	12.34	□□□□□ -0.43
TP53-222	ENST00000617185	TNFRSF25	Q93038	417 aa		12.34	□□□□□ -0.43
TP53-222	ENST00000617185	GFM2	Q969S9	779 aa	Known RBP	12.34	□□□□□ -0.43
TP53-222	ENST00000617185	TCHP	Q9BT92	498 aa		12.34	□□□□□ -0.43
TP53-222	ENST00000617185	EFR3B	Q9Y2G0	817 aa		12.34	□□□□□ -0.43
TP53-222	ENST00000617185	KIAA1551	Q9HCM1	1747 aa		12.34	□□□□□ -0.43
TP53-222	ENST00000617185	KLRF2	D3W0D1	207 aa		12.33	□□□□□ -0.44
TP53-222	ENST00000617185	WDR46	O15213	610 aa	Known RBP	12.33	□□□□□ -0.44
TP53-222	ENST00000617185	P4HA2	O15460	535 aa		12.33	□□□□□ -0.44
TP53-222	ENST00000617185	BBOX1	O75936	387 aa		12.33	□□□□□ -0.44
TP53-222	ENST00000617185	PSMG1	O95456	288 aa		12.33	□□□□□ -0.44
TP53-222	ENST00000617185	SERPING1	P05155	500 aa		12.33	□□□□□ -0.44
TP53-222	ENST00000617185	LDHC	P07864	332 aa		12.33	□□□□□ -0.44
TP53-222	ENST00000617185	T-ENOL	P0DO92	83 aa		12.33	□□□□□ -0.44
TP53-222	ENST00000617185	IL1R1	P14778	569 aa		12.33	□□□□□ -0.44
TP53-222	ENST00000617185	CERKL	Q49MI3	558 aa	Predicted RBP	12.33	□□□□□ -0.44
TP53-222	ENST00000617185	ZNF449	Q6P9G9	518 aa		12.33	□□□□□ -0.44
TP53-222	ENST00000617185	RASGEF1C	Q8N431	466 aa		12.33	□□□□□ -0.44
TP53-222	ENST00000617185	METTL13	Q8N6R0	699 aa		12.33	□□□□□ -0.44
TP53-222	ENST00000617185	DDX55	Q8NHQ9	600 aa	Known RBP eCLIP	12.33	□□□□□ -0.44	7e-7	■■□□□ 13
TP53-222	ENST00000617185	STMN2	Q93045	179 aa		12.33	□□□□□ -0.44
TP53-222	ENST00000617185	MAGEB18	Q96M61	343 aa		12.33	□□□□□ -0.44
TP53-222	ENST00000617185	TRIM51	Q9BSJ1	452 aa		12.33	□□□□□ -0.44
TP53-222	ENST00000617185	PITPNM3	Q9BZ71	974 aa		12.33	□□□□□ -0.44
TP53-222	ENST00000617185	ROPN1B	Q9BZX4	212 aa	Predicted RBP	12.33	□□□□□ -0.44
TP53-222	ENST00000617185	EPB41L1	Q9H4G0	881 aa		12.33	□□□□□ -0.44
TP53-222	ENST00000617185	ROPN1	Q9HAT0	212 aa	Predicted RBP	12.33	□□□□□ -0.44
TP53-222	ENST00000617185	TIMMDC1	Q9NPL8	285 aa		12.33	□□□□□ -0.44
TP53-222	ENST00000617185	PFDN4	Q9NQP4	134 aa		12.33	□□□□□ -0.44
TP53-222	ENST00000617185	TBC1D7	Q9P0N9	293 aa		12.33	□□□□□ -0.44
TP53-222	ENST00000617185	ZNF180	Q9UJW8	692 aa		12.33	□□□□□ -0.44
TP53-222	ENST00000617185	CHKB	Q9Y259	395 aa		12.33	□□□□□ -0.44
TP53-222	ENST00000617185	ZNF711	Q9Y462	761 aa		12.33	□□□□□ -0.44
TP53-222	ENST00000617185	UMODL1	Q5DID0	1318 aa		12.33	□□□□□ -0.44
TP53-222	ENST00000617185	BRWD3	Q6RI45	1802 aa		12.33	□□□□□ -0.44
TP53-222	ENST00000617185	USP17L5	A8MUK1	530 aa		12.33	□□□□□ -0.44
TP53-222	ENST00000617185	BTNL10	A8MVZ5	291 aa		12.33	□□□□□ -0.44
TP53-222	ENST00000617185	KRT36	O76013	467 aa		12.33	□□□□□ -0.44
TP53-222	ENST00000617185	ATP5D	P30049	168 aa		12.33	□□□□□ -0.44
TP53-222	ENST00000617185	RCAN1	P53805	252 aa		12.33	□□□□□ -0.44
TP53-222	ENST00000617185	POU5F1	Q01860	360 aa	Known RBP	12.33	□□□□□ -0.44
TP53-222	ENST00000617185	KLRC3	Q07444	240 aa		12.33	□□□□□ -0.44
TP53-222	ENST00000617185	SLC18A3	Q16572	532 aa		12.33	□□□□□ -0.44
TP53-222	ENST00000617185	SPDYA	Q5MJ70	313 aa		12.33	□□□□□ -0.44
TP53-222	ENST00000617185	DUPD1	Q68J44	220 aa		12.33	□□□□□ -0.44
TP53-222	ENST00000617185	ANKRD40	Q6AI12	368 aa		12.33	□□□□□ -0.44
TP53-222	ENST00000617185	PHLDB3	Q6NSJ2	640 aa		12.33	□□□□□ -0.44
TP53-222	ENST00000617185	DAAM2	Q86T65	1068 aa		12.33	□□□□□ -0.44
TP53-222	ENST00000617185	ZFPM1	Q8IX07	1006 aa		12.33	□□□□□ -0.44
TP53-222	ENST00000617185	ANKRD42	Q8N9B4	389 aa		12.33	□□□□□ -0.44
TP53-222	ENST00000617185	GDAP1	Q8TB36	358 aa		12.33	□□□□□ -0.44
TP53-222	ENST00000617185	ARHGEF2	Q92974	986 aa	Known RBP	12.33	□□□□□ -0.44
TP53-222	ENST00000617185	NMD3	Q96D46	503 aa	Known RBP	12.33	□□□□□ -0.44
TP53-222	ENST00000617185	ERP44	Q9BS26	406 aa		12.33	□□□□□ -0.44
TP53-222	ENST00000617185	SYNC	Q9H7C4	482 aa		12.33	□□□□□ -0.44
TP53-222	ENST00000617185	KRT82	Q9NSB4	513 aa		12.33	□□□□□ -0.44
TP53-222	ENST00000617185	STK24	Q9Y6E0	443 aa		12.33	□□□□□ -0.44
TP53-222	ENST00000617185	CHRNA5	P30532	468 aa		12.32	□□□□□ -0.44
TP53-222	ENST00000617185	STX2	P32856	288 aa		12.32	□□□□□ -0.44
TP53-222	ENST00000617185	HDAC4	P56524	1084 aa		12.32	□□□□□ -0.44
TP53-222	ENST00000617185	PDE1B	Q01064	536 aa		12.32	□□□□□ -0.44
TP53-222	ENST00000617185	CDR2	Q01850	454 aa		12.32	□□□□□ -0.44
TP53-222	ENST00000617185	NFIA	Q12857	509 aa		12.32	□□□□□ -0.44
TP53-222	ENST00000617185	DCTN2	Q13561	401 aa	Known RBP	12.32	□□□□□ -0.44
TP53-222	ENST00000617185	CLPP	Q16740	277 aa	Predicted RBP	12.32	□□□□□ -0.44
TP53-222	ENST00000617185	SH3D19	Q5HYK7	790 aa		12.32	□□□□□ -0.44
TP53-222	ENST00000617185	SLC27A3	Q5K4L6	730 aa		12.32	□□□□□ -0.44
TP53-222	ENST00000617185	DPP8	Q6V1X1	898 aa	Predicted RBP	12.32	□□□□□ -0.44
TP53-222	ENST00000617185	KBTBD2	Q8IY47	623 aa		12.32	□□□□□ -0.44
TP53-222	ENST00000617185	BLID	Q8IZY5	108 aa		12.32	□□□□□ -0.44
TP53-222	ENST00000617185	CYP4X1	Q8N118	509 aa		12.32	□□□□□ -0.44

Retrieved 100 of 20,778 RNA–protein pairs in 39.5 ms