RNA–Protein interactions for RNA: ENST00000615230.4

TNFRSF9-204, Transcript of TNF receptor superfamily member 9, humanhuman

APPRIS P1 TSL 5 BASIC

Gene TNFRSF9, Length 5,970 nt, Biotype protein coding, Subcellular localisation Cytoplasm, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
TNFRSF9-204ENST00000615230 RASSF2P50749 326 aa10.36□□□□□ -0.75
TNFRSF9-204ENST00000615230 ADKP55263 362 aaKnown RBP10.36□□□□□ -0.75
TNFRSF9-204ENST00000615230 PSMC1P62191 440 aaKnown RBP10.36□□□□□ -0.75
TNFRSF9-204ENST00000615230 RBM10P98175 930 aaKnown RBP10.36□□□□□ -0.75
TNFRSF9-204ENST00000615230 BRD3Q15059 726 aa10.36□□□□□ -0.75
TNFRSF9-204ENST00000615230 SPDYE1Q8NFV5 336 aaPredicted RBP10.36□□□□□ -0.75
TNFRSF9-204ENST00000615230 KRT35Q92764 455 aa10.36□□□□□ -0.75
TNFRSF9-204ENST00000615230 STMN2Q93045 179 aa10.36□□□□□ -0.75
TNFRSF9-204ENST00000615230 TRIM31Q9BZY9 425 aa10.36□□□□□ -0.75
TNFRSF9-204ENST00000615230 VWA5AO00534 786 aa10.36□□□□□ -0.75
TNFRSF9-204ENST00000615230 FSTL1Q12841 308 aa10.36□□□□□ -0.75
TNFRSF9-204ENST00000615230 ILF2Q12905 390 aaKnown RBP10.36□□□□□ -0.75
TNFRSF9-204ENST00000615230 ACVR2BQ13705 512 aa10.36□□□□□ -0.75
TNFRSF9-204ENST00000615230 CCDC144BQ3MJ40 725 aa10.36□□□□□ -0.75
TNFRSF9-204ENST00000615230 TAF1BQ53T94 588 aaPredicted RBP10.36□□□□□ -0.75
TNFRSF9-204ENST00000615230 TLK2Q86UE8 772 aa10.36□□□□□ -0.75
TNFRSF9-204ENST00000615230 AKT1S1Q96B36 256 aa10.36□□□□□ -0.75
TNFRSF9-204ENST00000615230 KLHL8Q9P2G9 620 aaPredicted RBP10.36□□□□□ -0.75
TNFRSF9-204ENST00000615230 MOSPD1Q9UJG1 213 aa10.36□□□□□ -0.75
TNFRSF9-204ENST00000615230 IGF2BP2Q9Y6M1 599 aaKnown RBP eCLIP10.36□□□□□ -0.75
TNFRSF9-204ENST00000615230 SFI1A8K8P3 1242 aa10.35□□□□□ -0.75
TNFRSF9-204ENST00000615230 GTF2F1P35269 517 aaKnown RBP eCLIP10.35□□□□□ -0.75
TNFRSF9-204ENST00000615230 PSEN2P49810 448 aa10.35□□□□□ -0.75
TNFRSF9-204ENST00000615230 APLP1P51693 650 aa10.35□□□□□ -0.75
TNFRSF9-204ENST00000615230 MAP2K5Q13163 448 aa10.35□□□□□ -0.75
TNFRSF9-204ENST00000615230 FRA10AC1Q70Z53 315 aa10.35□□□□□ -0.75
TNFRSF9-204ENST00000615230 NECAB2Q7Z6G3 386 aa10.35□□□□□ -0.75
TNFRSF9-204ENST00000615230 NT5C1AQ9BXI3 368 aa10.35□□□□□ -0.75
TNFRSF9-204ENST00000615230 GOLGA8MH3BSY2 632 aa10.35□□□□□ -0.75
TNFRSF9-204ENST00000615230 ADORA2AP29274 412 aa10.35□□□□□ -0.75
TNFRSF9-204ENST00000615230 ALDH5A1P51649 535 aaPredicted RBP10.35□□□□□ -0.75
TNFRSF9-204ENST00000615230 TMED2Q15363 201 aa10.35□□□□□ -0.75
TNFRSF9-204ENST00000615230 EDRF1Q3B7T1 1238 aa10.35□□□□□ -0.75
TNFRSF9-204ENST00000615230 PGBD3Q8N328 593 aa10.35□□□□□ -0.75
TNFRSF9-204ENST00000615230 AFAP1L1Q8TED9 768 aa10.35□□□□□ -0.75
TNFRSF9-204ENST00000615230 APBB2Q92870 758 aa10.35□□□□□ -0.75
TNFRSF9-204ENST00000615230 DCUN1D1Q96GG9 259 aa10.35□□□□□ -0.75
TNFRSF9-204ENST00000615230 SLC25A13Q9UJS0 675 aa10.35□□□□□ -0.75
TNFRSF9-204ENST00000615230 TMEM247A6NEH6 219 aa10.35□□□□□ -0.75
TNFRSF9-204ENST00000615230 FBXO21O94952 628 aa10.35□□□□□ -0.75
TNFRSF9-204ENST00000615230 HMGCRP04035 888 aa10.35□□□□□ -0.75
TNFRSF9-204ENST00000615230 SLC11A2P49281 568 aa10.35□□□□□ -0.75
TNFRSF9-204ENST00000615230 FSCN1Q16658 493 aaKnown RBP10.35□□□□□ -0.75
TNFRSF9-204ENST00000615230 MPZL3Q6UWV2 235 aa10.35□□□□□ -0.75
TNFRSF9-204ENST00000615230 CATSPERGQ6ZRH7 1159 aa10.35□□□□□ -0.75
TNFRSF9-204ENST00000615230 ZNF512Q96ME7 567 aaPredicted RBP10.35□□□□□ -0.75
TNFRSF9-204ENST00000615230 EPB41L4AQ9HCS5 686 aaPredicted RBP10.35□□□□□ -0.75
TNFRSF9-204ENST00000615230 NGRNQ9NPE2 291 aaKnown RBP10.35□□□□□ -0.75
TNFRSF9-204ENST00000615230 CNOT8Q9UFF9 292 aaKnown RBP10.35□□□□□ -0.75
TNFRSF9-204ENST00000615230 DOLKQ9UPQ8 538 aa10.35□□□□□ -0.75
TNFRSF9-204ENST00000615230 LGALS16A8MUM7 142 aa10.35□□□□□ -0.75
TNFRSF9-204ENST00000615230 CASP14P31944 242 aa10.35□□□□□ -0.75
TNFRSF9-204ENST00000615230 TSTA3Q13630 321 aaPredicted RBP10.35□□□□□ -0.75
TNFRSF9-204ENST00000615230 MGAT5BQ3V5L5 792 aa10.35□□□□□ -0.75
TNFRSF9-204ENST00000615230 FAM43BQ6ZT52 329 aaPredicted RBP10.35□□□□□ -0.75
TNFRSF9-204ENST00000615230 CEP120Q8N960 986 aa10.35□□□□□ -0.75
TNFRSF9-204ENST00000615230 TMEM143Q96AN5 459 aa10.35□□□□□ -0.75
TNFRSF9-204ENST00000615230 NHEJ1Q9H9Q4 299 aaPredicted RBP10.35□□□□□ -0.75
TNFRSF9-204ENST00000615230 PCDHA13Q9Y5I0 950 aa10.35□□□□□ -0.75
TNFRSF9-204ENST00000615230 GAKO14976 1311 aa10.35□□□□□ -0.75
TNFRSF9-204ENST00000615230 TRPA1O75762 1119 aa10.35□□□□□ -0.75
TNFRSF9-204ENST00000615230 U2AF2P26368 475 aaKnown RBP eCLIP10.35□□□□□ -0.75
TNFRSF9-204ENST00000615230 ETFBP38117 255 aa10.35□□□□□ -0.75
TNFRSF9-204ENST00000615230 GCLMP48507 274 aa10.35□□□□□ -0.75
TNFRSF9-204ENST00000615230 KCNH2Q12809 1159 aa10.35□□□□□ -0.75
TNFRSF9-204ENST00000615230 RABGAP1LQ5R372 815 aa10.35□□□□□ -0.75
TNFRSF9-204ENST00000615230 KIRREL3Q8IZU9 778 aa10.35□□□□□ -0.75
TNFRSF9-204ENST00000615230 DEPDC1BQ8WUY9 529 aa10.35□□□□□ -0.75
TNFRSF9-204ENST00000615230 CENPKQ9BS16 269 aa10.35□□□□□ -0.75
TNFRSF9-204ENST00000615230 WNT8AQ9H1J5 351 aa10.35□□□□□ -0.75
TNFRSF9-204ENST00000615230 CAMTA1Q9Y6Y1 1673 aa10.34□□□□□ -0.75
TNFRSF9-204ENST00000615230 POTEAQ6S8J7 498 aa10.34□□□□□ -0.75
TNFRSF9-204ENST00000615230 CENPUQ71F23 418 aa10.34□□□□□ -0.75
TNFRSF9-204ENST00000615230 PPFIBP2Q8ND30 876 aa10.34□□□□□ -0.75
TNFRSF9-204ENST00000615230 MAGOHBQ96A72 148 aaKnown RBP10.34□□□□□ -0.75
TNFRSF9-204ENST00000615230 FAM96AQ9H5X1 160 aa10.34□□□□□ -0.75
TNFRSF9-204ENST00000615230 PODXLO00592 558 aa10.34□□□□□ -0.75
TNFRSF9-204ENST00000615230 ADCY6O43306 1168 aa10.34□□□□□ -0.75
TNFRSF9-204ENST00000615230 EVI5O60447 810 aa10.34□□□□□ -0.75
TNFRSF9-204ENST00000615230 ALDH2P05091 517 aa10.34□□□□□ -0.75
TNFRSF9-204ENST00000615230 CYP11B2P19099 503 aa10.34□□□□□ -0.75
TNFRSF9-204ENST00000615230 MSH2P43246 934 aa10.34□□□□□ -0.75
TNFRSF9-204ENST00000615230 VGLL4Q14135 290 aa10.34□□□□□ -0.75
TNFRSF9-204ENST00000615230 PTGISQ16647 500 aa10.34□□□□□ -0.75
TNFRSF9-204ENST00000615230 SYT17Q9BSW7 474 aa10.34□□□□□ -0.75
TNFRSF9-204ENST00000615230 TMEM8AQ9HCN3 771 aa10.34□□□□□ -0.75
TNFRSF9-204ENST00000615230 EIF4ENIF1Q9NRA8 985 aaKnown RBP10.34□□□□□ -0.75
TNFRSF9-204ENST00000615230 OLA1Q9NTK5 396 aaKnown RBP10.34□□□□□ -0.75
TNFRSF9-204ENST00000615230 MON2Q7Z3U7 1717 aa10.34□□□□□ -0.75
TNFRSF9-204ENST00000615230 IQANK1A0A1B0GTG1 560 aa10.34□□□□□ -0.75
TNFRSF9-204ENST00000615230 MCF2P10911 925 aa10.34□□□□□ -0.75
TNFRSF9-204ENST00000615230 RALBP11234 206 aa10.34□□□□□ -0.75
TNFRSF9-204ENST00000615230 PTPRAP18433 802 aa10.34□□□□□ -0.75
TNFRSF9-204ENST00000615230 MX2P20592 715 aa10.34□□□□□ -0.75
TNFRSF9-204ENST00000615230 ARL4DP49703 201 aa10.34□□□□□ -0.75
TNFRSF9-204ENST00000615230 RBL2Q08999 1139 aa10.34□□□□□ -0.75
TNFRSF9-204ENST00000615230 C4orf19Q8IY42 314 aa10.34□□□□□ -0.75
TNFRSF9-204ENST00000615230 GAS2L1Q99501 681 aaPredicted RBP10.34□□□□□ -0.75
TNFRSF9-204ENST00000615230 AGO4Q9HCK5 861 aaKnown RBP10.34□□□□□ -0.75
TNFRSF9-204ENST00000615230 MRC1P22897 1456 aa10.34□□□□□ -0.75
Retrieved 100 of 20,778 RNA–protein pairs in 27.4 ms