RNA–Protein interactions for RNA: ENST00000612930.1

TSKU-205, Transcript of tsukushi, small leucine rich proteoglycan, humanhuman

APPRIS P1 TSL 4 BASIC

Gene TSKU, Length 2,666 nt, Biotype protein coding, Subcellular localisation Endoplasmic reticulum .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
TSKU-205ENST00000612930 SLCO2A1Q92959 643 aa17.71■□□□□ 0.43
TSKU-205ENST00000612930 ZNF287Q9HBT7 754 aa17.71■□□□□ 0.43
TSKU-205ENST00000612930 APEX2Q9UBZ4 518 aa17.71■□□□□ 0.43
TSKU-205ENST00000612930 ASIC3Q9UHC3 531 aa17.71■□□□□ 0.43
TSKU-205ENST00000612930 ACTL7BQ9Y614 415 aa17.71■□□□□ 0.43
TSKU-205ENST00000612930 FAM47DPA6NHR8 397 aa17.71■□□□□ 0.43
TSKU-205ENST00000612930 CDH16O75309 829 aa17.71■□□□□ 0.43
TSKU-205ENST00000612930 DCTN3O75935 186 aa17.71■□□□□ 0.43
TSKU-205ENST00000612930 LDHBP07195 334 aaKnown RBP17.71■□□□□ 0.43
TSKU-205ENST00000612930 POLD1P28340 1107 aa17.71■□□□□ 0.43
TSKU-205ENST00000612930 ITGA8P53708 1063 aa17.71■□□□□ 0.43
TSKU-205ENST00000612930 GPC5P78333 572 aa17.71■□□□□ 0.43
TSKU-205ENST00000612930 PHLDB3Q6NSJ2 640 aa17.71■□□□□ 0.43
TSKU-205ENST00000612930 LRRC8CQ8TDW0 803 aa17.71■□□□□ 0.43
TSKU-205ENST00000612930 FBXO41Q8TF61 875 aa17.71■□□□□ 0.43
TSKU-205ENST00000612930 C10orf82Q8WW14 230 aa17.71■□□□□ 0.43
TSKU-205ENST00000612930 BTBD6Q96KE9 485 aa17.71■□□□□ 0.43
TSKU-205ENST00000612930 JMJD4Q9H9V9 463 aa17.71■□□□□ 0.43
TSKU-205ENST00000612930 RPL26L1Q9UNX3 145 aaKnown RBP17.71■□□□□ 0.43
TSKU-205ENST00000612930 LRCH1Q9Y2L9 728 aa17.71■□□□□ 0.43
TSKU-205ENST00000612930 ZMYM2Q9UBW7 1377 aa17.71■□□□□ 0.42
TSKU-205ENST00000612930 PSMC2P35998 433 aaKnown RBP17.7■□□□□ 0.42
TSKU-205ENST00000612930 VHLP40337 213 aa17.7■□□□□ 0.42
TSKU-205ENST00000612930 SSR1P43307 286 aaKnown RBP17.7■□□□□ 0.42
TSKU-205ENST00000612930 PPP4CP60510 307 aa17.7■□□□□ 0.42
TSKU-205ENST00000612930 RCN2Q14257 317 aa17.7■□□□□ 0.42
TSKU-205ENST00000612930 RBM26Q5T8P6 1007 aaKnown RBP17.7■□□□□ 0.42
TSKU-205ENST00000612930 MIPEPQ99797 713 aa17.7■□□□□ 0.42
TSKU-205ENST00000612930 NHSQ6T4R5 1651 aa17.7■□□□□ 0.42
TSKU-205ENST00000612930 RASA4BC9J798 803 aa17.7■□□□□ 0.42
TSKU-205ENST00000612930 ATMINO43313 823 aaPredicted RBP17.7■□□□□ 0.42
TSKU-205ENST00000612930 RASA4O43374 803 aa17.7■□□□□ 0.42
TSKU-205ENST00000612930 SLC26A4O43511 780 aa17.7■□□□□ 0.42
TSKU-205ENST00000612930 SPAG7O75391 227 aa17.7■□□□□ 0.42
TSKU-205ENST00000612930 TRIM49P0CI25 452 aa17.7■□□□□ 0.42
TSKU-205ENST00000612930 TRIM49CP0CI26 452 aa17.7■□□□□ 0.42
TSKU-205ENST00000612930 SPATA31C1P0DKV0 1188 aa17.7■□□□□ 0.42
TSKU-205ENST00000612930 PTPN4P29074 926 aa17.7■□□□□ 0.42
TSKU-205ENST00000612930 TRIP13Q15645 432 aaPredicted RBP17.7■□□□□ 0.42
TSKU-205ENST00000612930 ZNF746Q6NUN9 644 aaPredicted RBP17.7■□□□□ 0.42
TSKU-205ENST00000612930 C4orf50Q6ZRC1 276 aa17.7■□□□□ 0.42
TSKU-205ENST00000612930 LRRC47Q8N1G4 583 aaKnown RBP17.7■□□□□ 0.42
TSKU-205ENST00000612930 TRAPPC9Q96Q05 1148 aa17.7■□□□□ 0.42
TSKU-205ENST00000612930 STOML1Q9UBI4 398 aa17.7■□□□□ 0.42
TSKU-205ENST00000612930 SCOCQ9UIL1 159 aa17.7■□□□□ 0.42
TSKU-205ENST00000612930 GRID1Q9ULK0 1009 aa17.7■□□□□ 0.42
TSKU-205ENST00000612930 ATF5Q9Y2D1 282 aaPredicted RBP17.7■□□□□ 0.42
TSKU-205ENST00000612930 PNMA6FA0A0J9YX94 578 aa17.69■□□□□ 0.42
TSKU-205ENST00000612930 CLDN3O15551 220 aa17.69■□□□□ 0.42
TSKU-205ENST00000612930 LMNAP02545 664 aaKnown RBP17.69■□□□□ 0.42
TSKU-205ENST00000612930 MARK3P27448 753 aa17.69■□□□□ 0.42
TSKU-205ENST00000612930 RASSF2P50749 326 aa17.69■□□□□ 0.42
TSKU-205ENST00000612930 SPIRE1Q08AE8 756 aa17.69■□□□□ 0.42
TSKU-205ENST00000612930 TAF1BQ53T94 588 aaPredicted RBP17.69■□□□□ 0.42
TSKU-205ENST00000612930 SNX30Q5VWJ9 437 aa17.69■□□□□ 0.42
TSKU-205ENST00000612930 PPP1R18Q6NYC8 613 aa17.69■□□□□ 0.42
TSKU-205ENST00000612930 B4GALNT2Q8NHY0 566 aa17.69■□□□□ 0.42
TSKU-205ENST00000612930 DENND1AQ8TEH3 1009 aa17.69■□□□□ 0.42
TSKU-205ENST00000612930 MAML1Q92585 1016 aa17.69■□□□□ 0.42
TSKU-205ENST00000612930 SNF8Q96H20 258 aa17.69■□□□□ 0.42
TSKU-205ENST00000612930 DNM3Q9UQ16 869 aa17.69■□□□□ 0.42
TSKU-205ENST00000612930 NUMBLQ9Y6R0 609 aa17.69■□□□□ 0.42
TSKU-205ENST00000612930 DOT1LQ8TEK3 1739 aa17.69■□□□□ 0.42
TSKU-205ENST00000612930 CDK5RAP2Q96SN8 1893 aa17.69■□□□□ 0.42
TSKU-205ENST00000612930 EDF1O60869 148 aaKnown RBP17.69■□□□□ 0.42
TSKU-205ENST00000612930 ATP9AO75110 1047 aa17.69■□□□□ 0.42
TSKU-205ENST00000612930 PYGLP06737 847 aa17.69■□□□□ 0.42
TSKU-205ENST00000612930 COG2Q14746 738 aa17.69■□□□□ 0.42
TSKU-205ENST00000612930 ARMC3Q5W041 872 aa17.69■□□□□ 0.42
TSKU-205ENST00000612930 DSTYKQ6XUX3 929 aa17.69■□□□□ 0.42
TSKU-205ENST00000612930 ADGRF4Q8IZF3 695 aa17.69■□□□□ 0.42
TSKU-205ENST00000612930 ANKRD35Q8N283 1001 aa17.69■□□□□ 0.42
TSKU-205ENST00000612930 SCG3Q8WXD2 468 aaKnown RBP17.69■□□□□ 0.42
TSKU-205ENST00000612930 FGD4Q96M96 766 aa17.69■□□□□ 0.42
TSKU-205ENST00000612930 SFI1A8K8P3 1242 aa17.68■□□□□ 0.42
TSKU-205ENST00000612930 CUL3Q13618 768 aa17.68■□□□□ 0.42
TSKU-205ENST00000612930 ASPRV1Q53RT3 343 aa17.68■□□□□ 0.42
TSKU-205ENST00000612930 CHST7Q9NS84 486 aa17.68■□□□□ 0.42
TSKU-205ENST00000612930 RPS8P62241 208 aaKnown RBP17.68■□□□□ 0.42
TSKU-205ENST00000612930 OCRLQ01968 901 aa17.68■□□□□ 0.42
TSKU-205ENST00000612930 TMED2Q15363 201 aa17.68■□□□□ 0.42
TSKU-205ENST00000612930 SGO2Q562F6 1265 aa17.68■□□□□ 0.42
TSKU-205ENST00000612930 ARHGAP22Q7Z5H3 698 aa17.68■□□□□ 0.42
TSKU-205ENST00000612930 CADPS2Q86UW7 1296 aa17.68■□□□□ 0.42
TSKU-205ENST00000612930 BICD1Q96G01 975 aa17.68■□□□□ 0.42
TSKU-205ENST00000612930 LNPEPQ9UIQ6 1025 aa17.68■□□□□ 0.42
TSKU-205ENST00000612930 MYH14Q7Z406 1995 aaKnown RBP17.68■□□□□ 0.42
TSKU-205ENST00000612930 USP17L15C9J2P7 530 aa17.67■□□□□ 0.42
TSKU-205ENST00000612930 USP17L13C9JLJ4 530 aa17.67■□□□□ 0.42
TSKU-205ENST00000612930 USP17L11C9JVI0 530 aa17.67■□□□□ 0.42
TSKU-205ENST00000612930 USP17L18D6R9N7 530 aa17.67■□□□□ 0.42
TSKU-205ENST00000612930 USP17L22D6RA61 530 aa17.67■□□□□ 0.42
TSKU-205ENST00000612930 USP17L17D6RBQ6 530 aa17.67■□□□□ 0.42
TSKU-205ENST00000612930 USP17L19D6RCP7 530 aa17.67■□□□□ 0.42
TSKU-205ENST00000612930 USP17L20D6RJB6 530 aa17.67■□□□□ 0.42
TSKU-205ENST00000612930 SPOPO43791 374 aa17.67■□□□□ 0.42
TSKU-205ENST00000612930 MTA2O94776 668 aa17.67■□□□□ 0.42
TSKU-205ENST00000612930 CACNA2D1P54289 1103 aa17.67■□□□□ 0.42
TSKU-205ENST00000612930 USP17L24Q0WX57 530 aa17.67■□□□□ 0.42
TSKU-205ENST00000612930 TTBK2Q6IQ55 1244 aa17.67■□□□□ 0.42
Retrieved 100 of 20,778 RNA–protein pairs in 24.4 ms