RNA–Protein interactions for RNA: ENST00000612341.4

SMTN-222, Transcript of smoothelin, human

APPRIS ALT2 TSL 2 BASIC

Gene SMTN, Length 3,321 nt, Biotype protein coding, Subcellular localisation Cytosol .

RNA		Protein				Prediction (catRAPID)		Interaction (ENCODE eCLIP)
Transcript Symbol	Ensembl Transcript ID	Gene	UniProt Accession	Length	Protein Status	Prediction Score	Prediction z-Score	p-Value	Fold Change
SMTN-222	ENST00000612341	PEX10	O60683	326 aa		13.84	□□□□□ -0.19
SMTN-222	ENST00000612341	ERLIN2	O94905	339 aa		13.84	□□□□□ -0.19
SMTN-222	ENST00000612341	HMGCS2	P54868	508 aa		13.84	□□□□□ -0.19
SMTN-222	ENST00000612341	MTERF2	Q49AM1	385 aa		13.84	□□□□□ -0.19
SMTN-222	ENST00000612341	FKBP1C	Q5VVH2	108 aa		13.84	□□□□□ -0.19
SMTN-222	ENST00000612341	CCDC137	Q6PK04	289 aa	Known RBP	13.84	□□□□□ -0.19
SMTN-222	ENST00000612341	RUFY4	Q6ZNE9	571 aa		13.84	□□□□□ -0.19
SMTN-222	ENST00000612341	NLRP14	Q86W24	1093 aa		13.84	□□□□□ -0.19
SMTN-222	ENST00000612341	KIAA1683	Q9H0B3	1180 aa		13.84	□□□□□ -0.19
SMTN-222	ENST00000612341	DNAJC17	Q9NVM6	304 aa	Known RBP	13.84	□□□□□ -0.19
SMTN-222	ENST00000612341	RAB20	Q9NX57	234 aa		13.84	□□□□□ -0.19
SMTN-222	ENST00000612341	PCDHA10	Q9Y5I2	948 aa		13.84	□□□□□ -0.19
SMTN-222	ENST00000612341	VWA5A	O00534	786 aa		13.84	□□□□□ -0.19
SMTN-222	ENST00000612341	HARS	P12081	509 aa	Known RBP	13.84	□□□□□ -0.19
SMTN-222	ENST00000612341	FGFR4	P22455	802 aa		13.84	□□□□□ -0.19
SMTN-222	ENST00000612341	RFX1	P22670	979 aa		13.84	□□□□□ -0.19
SMTN-222	ENST00000612341	GJC1	P36383	396 aa		13.84	□□□□□ -0.19
SMTN-222	ENST00000612341	INHBE	P58166	350 aa		13.84	□□□□□ -0.19
SMTN-222	ENST00000612341	MTMR3	Q13615	1198 aa		13.84	□□□□□ -0.19
SMTN-222	ENST00000612341	MYBPC2	Q14324	1141 aa		13.84	□□□□□ -0.19
SMTN-222	ENST00000612341	FBXL13	Q8NEE6	735 aa		13.84	□□□□□ -0.19
SMTN-222	ENST00000612341	ZNF473	Q8WTR7	871 aa	Known RBP	13.84	□□□□□ -0.19
SMTN-222	ENST00000612341	C1orf54	Q8WWF1	131 aa		13.84	□□□□□ -0.19
SMTN-222	ENST00000612341	CPA5	Q8WXQ8	436 aa		13.84	□□□□□ -0.19
SMTN-222	ENST00000612341	CCDC113	Q9H0I3	377 aa		13.84	□□□□□ -0.19
SMTN-222	ENST00000612341	EXOC7	Q9UPT5	735 aa		13.84	□□□□□ -0.19
SMTN-222	ENST00000612341	CLDN3	O15551	220 aa		13.84	□□□□□ -0.19
SMTN-222	ENST00000612341	CAND2	O75155	1236 aa		13.84	□□□□□ -0.19
SMTN-222	ENST00000612341	NCKAP1L	P55160	1127 aa		13.84	□□□□□ -0.19
SMTN-222	ENST00000612341	TRIP13	Q15645	432 aa	Predicted RBP	13.84	□□□□□ -0.19
SMTN-222	ENST00000612341	DUPD1	Q68J44	220 aa		13.84	□□□□□ -0.19
SMTN-222	ENST00000612341	SPOPL	Q6IQ16	392 aa		13.84	□□□□□ -0.19
SMTN-222	ENST00000612341	CHADL	Q6NUI6	762 aa		13.84	□□□□□ -0.19
SMTN-222	ENST00000612341	SLC39A4	Q6P5W5	647 aa		13.84	□□□□□ -0.19
SMTN-222	ENST00000612341	LRIG3	Q6UXM1	1119 aa		13.84	□□□□□ -0.19
SMTN-222	ENST00000612341	TEPSIN	Q96N21	525 aa		13.84	□□□□□ -0.19
SMTN-222	ENST00000612341	FAM118B	Q9BPY3	351 aa		13.84	□□□□□ -0.19
SMTN-222	ENST00000612341	DEFB129	Q9H1M3	183 aa		13.84	□□□□□ -0.19
SMTN-222	ENST00000612341	PNMA2	Q9UL42	364 aa		13.84	□□□□□ -0.19
SMTN-222	ENST00000612341	RPL21	P46778	160 aa	Known RBP	13.83	□□□□□ -0.2
SMTN-222	ENST00000612341	ACOT2	P49753	483 aa		13.83	□□□□□ -0.2
SMTN-222	ENST00000612341	VPS41	P49754	854 aa		13.83	□□□□□ -0.2
SMTN-222	ENST00000612341	JAK3	P52333	1124 aa		13.83	□□□□□ -0.2
SMTN-222	ENST00000612341	KRT76	Q01546	638 aa		13.83	□□□□□ -0.2
SMTN-222	ENST00000612341	PASD1	Q8IV76	773 aa		13.83	□□□□□ -0.2
SMTN-222	ENST00000612341	MYCBPAP	Q8TBZ2	947 aa		13.83	□□□□□ -0.2
SMTN-222	ENST00000612341	HELQ	Q8TDG4	1101 aa		13.83	□□□□□ -0.2
SMTN-222	ENST00000612341	DGCR8	Q8WYQ5	773 aa	Known RBP eCLIP	13.83	□□□□□ -0.2	5e-16	■■■■■ 130.7
SMTN-222	ENST00000612341	IWS1	Q96ST2	819 aa		13.83	□□□□□ -0.2
SMTN-222	ENST00000612341	MOV10L1	Q9BXT6	1211 aa	Known RBP	13.83	□□□□□ -0.2
SMTN-222	ENST00000612341	PFAS	O15067	1338 aa		13.83	□□□□□ -0.2
SMTN-222	ENST00000612341	KIAA0754	O94854	1291 aa		13.83	□□□□□ -0.2
SMTN-222	ENST00000612341	TNNI1	P19237	187 aa		13.83	□□□□□ -0.2
SMTN-222	ENST00000612341	IFT88	Q13099	833 aa		13.83	□□□□□ -0.2
SMTN-222	ENST00000612341	BIRC3	Q13489	604 aa		13.83	□□□□□ -0.2
SMTN-222	ENST00000612341	SEZ6	Q53EL9	994 aa		13.83	□□□□□ -0.2
SMTN-222	ENST00000612341	NAIF1	Q69YI7	327 aa	Predicted RBP	13.83	□□□□□ -0.2
SMTN-222	ENST00000612341	NIPA1	Q7RTP0	329 aa		13.83	□□□□□ -0.2
SMTN-222	ENST00000612341	TADA2B	Q86TJ2	420 aa		13.83	□□□□□ -0.2
SMTN-222	ENST00000612341	SHC3	Q92529	594 aa		13.83	□□□□□ -0.2
SMTN-222	ENST00000612341	SELENOS	Q9BQE4	189 aa		13.83	□□□□□ -0.2
SMTN-222	ENST00000612341	SEMA4A	Q9H3S1	761 aa		13.83	□□□□□ -0.2
SMTN-222	ENST00000612341	RASAL2	Q9UJF2	1139 aa		13.83	□□□□□ -0.2
SMTN-222	ENST00000612341	TTC7A	Q9ULT0	858 aa	Predicted RBP	13.83	□□□□□ -0.2
SMTN-222	ENST00000612341	SYNGAP1	Q96PV0	1343 aa		13.83	□□□□□ -0.2
SMTN-222	ENST00000612341	P4HA2	O15460	535 aa		13.82	□□□□□ -0.2
SMTN-222	ENST00000612341	MAPT	P10636	758 aa	Known RBP	13.82	□□□□□ -0.2
SMTN-222	ENST00000612341	PMS2	P54278	862 aa		13.82	□□□□□ -0.2
SMTN-222	ENST00000612341	SLC29A2	Q14542	456 aa		13.82	□□□□□ -0.2
SMTN-222	ENST00000612341	MAP4K3	Q8IVH8	894 aa		13.82	□□□□□ -0.2
SMTN-222	ENST00000612341	PPM1E	Q8WY54	764 aa		13.82	□□□□□ -0.2
SMTN-222	ENST00000612341	TMEM143	Q96AN5	459 aa		13.82	□□□□□ -0.2
SMTN-222	ENST00000612341	ANAPC7	Q9UJX3	599 aa		13.82	□□□□□ -0.2
SMTN-222	ENST00000612341	MIF4GD	A9UHW6	222 aa	Known RBP	13.82	□□□□□ -0.2
SMTN-222	ENST00000612341	KIAA0391	O15091	583 aa	Known RBP	13.82	□□□□□ -0.2
SMTN-222	ENST00000612341	PHF2	O75151	1096 aa		13.82	□□□□□ -0.2
SMTN-222	ENST00000612341	ATP2C2	O75185	946 aa		13.82	□□□□□ -0.2
SMTN-222	ENST00000612341	SSR1	P43307	286 aa	Known RBP	13.82	□□□□□ -0.2
SMTN-222	ENST00000612341	CCDC60	Q8IWA6	550 aa	Predicted RBP	13.82	□□□□□ -0.2
SMTN-222	ENST00000612341	MICALL2	Q8IY33	904 aa		13.82	□□□□□ -0.2
SMTN-222	ENST00000612341	ARFGAP2	Q8N6H7	521 aa		13.82	□□□□□ -0.2
SMTN-222	ENST00000612341	ATG4A	Q8WYN0	398 aa		13.82	□□□□□ -0.2
SMTN-222	ENST00000612341	WRNIP1	Q96S55	665 aa		13.82	□□□□□ -0.2
SMTN-222	ENST00000612341	TMEM8A	Q9HCN3	771 aa		13.82	□□□□□ -0.2
SMTN-222	ENST00000612341	HACL1	Q9UJ83	578 aa		13.82	□□□□□ -0.2
SMTN-222	ENST00000612341	DIS3	Q9Y2L1	958 aa	Known RBP	13.82	□□□□□ -0.2
SMTN-222	ENST00000612341	RARA	P10276	462 aa		13.82	□□□□□ -0.2
SMTN-222	ENST00000612341	PEX5	P50542	639 aa		13.82	□□□□□ -0.2
SMTN-222	ENST00000612341	PPP2R2A	P63151	447 aa		13.82	□□□□□ -0.2
SMTN-222	ENST00000612341	PPP1R7	Q15435	360 aa		13.82	□□□□□ -0.2
SMTN-222	ENST00000612341	DENND2C	Q68D51	928 aa		13.82	□□□□□ -0.2
SMTN-222	ENST00000612341	C11orf63	Q6NUN7	778 aa		13.82	□□□□□ -0.2
SMTN-222	ENST00000612341	OTUD6A	Q7L8S5	288 aa		13.82	□□□□□ -0.2
SMTN-222	ENST00000612341	C12orf56	Q8IXR9	622 aa		13.82	□□□□□ -0.2
SMTN-222	ENST00000612341	EFCAB13	Q8IY85	973 aa		13.82	□□□□□ -0.2
SMTN-222	ENST00000612341	OTUD6B	Q8N6M0	293 aa		13.82	□□□□□ -0.2
SMTN-222	ENST00000612341	ZDHHC18	Q9NUE0	388 aa		13.82	□□□□□ -0.2
SMTN-222	ENST00000612341	ZBTB7A	O95365	584 aa		13.81	□□□□□ -0.2
SMTN-222	ENST00000612341	LYPLA2	O95372	231 aa		13.81	□□□□□ -0.2
SMTN-222	ENST00000612341	CCND2	P30279	289 aa		13.81	□□□□□ -0.2

Retrieved 100 of 20,778 RNA–protein pairs in 15.2 ms