RNA–Protein interactions for RNA: ENST00000612311.4

TMCO1-208, Transcript of transmembrane and coiled-coil domains 1, humanhuman

TSL 1 (best) BASIC

Gene TMCO1, Length 4,468 nt, Biotype protein coding, Subcellular localisation Endoplasmic reticulum, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
TMCO1-208ENST00000612311 VEGFAP15692 232 aaPredicted RBP9.13□□□□□ -0.95
TMCO1-208ENST00000612311 BCAR1P56945 870 aa9.13□□□□□ -0.95
TMCO1-208ENST00000612311 TAP1Q03518 808 aa9.13□□□□□ -0.95
TMCO1-208ENST00000612311 TBX2Q13207 712 aaPredicted RBP9.13□□□□□ -0.95
TMCO1-208ENST00000612311 RBBP8NLQ8NC74 664 aaPredicted RBP9.13□□□□□ -0.95
TMCO1-208ENST00000612311 CPA5Q8WXQ8 436 aa9.13□□□□□ -0.95
TMCO1-208ENST00000612311 HVCN1Q96D96 273 aa9.13□□□□□ -0.95
TMCO1-208ENST00000612311 GGA3Q9NZ52 723 aa9.13□□□□□ -0.95
TMCO1-208ENST00000612311 EHD2Q9NZN4 543 aa9.13□□□□□ -0.95
TMCO1-208ENST00000612311 SUCLA2Q9P2R7 463 aaPredicted RBP9.13□□□□□ -0.95
TMCO1-208ENST00000612311 TLK1Q9UKI8 766 aa9.13□□□□□ -0.95
TMCO1-208ENST00000612311 IGSF9BQ9UPX0 1349 aa9.13□□□□□ -0.95
TMCO1-208ENST00000612311 PHF2O75151 1096 aa9.13□□□□□ -0.95
TMCO1-208ENST00000612311 GSTA1P08263 222 aa9.13□□□□□ -0.95
TMCO1-208ENST00000612311 GSTA2P09210 222 aa9.13□□□□□ -0.95
TMCO1-208ENST00000612311 COMTP21964 271 aa9.13□□□□□ -0.95
TMCO1-208ENST00000612311 CYP2C19P33261 490 aa9.13□□□□□ -0.95
TMCO1-208ENST00000612311 GUCY1A3Q02108 690 aa9.13□□□□□ -0.95
TMCO1-208ENST00000612311 MXD4Q14582 209 aaPredicted RBP9.13□□□□□ -0.95
TMCO1-208ENST00000612311 E2F4Q16254 413 aa9.13□□□□□ -0.95
TMCO1-208ENST00000612311 ARL13BQ3SXY8 428 aa9.13□□□□□ -0.95
TMCO1-208ENST00000612311 BEND6Q5SZJ8 279 aaPredicted RBP9.13□□□□□ -0.95
TMCO1-208ENST00000612311 PAPD7Q5XG87 772 aaKnown RBP9.13□□□□□ -0.95
TMCO1-208ENST00000612311 EPM2AIP1Q7L775 607 aaPredicted RBP9.13□□□□□ -0.95
TMCO1-208ENST00000612311 FASTKD5Q7L8L6 764 aaKnown RBP9.13□□□□□ -0.95
TMCO1-208ENST00000612311 NLRP14Q86W24 1093 aa9.13□□□□□ -0.95
TMCO1-208ENST00000612311 BBS5Q8N3I7 341 aa9.13□□□□□ -0.95
TMCO1-208ENST00000612311 GMCL1P1Q8NEA9 526 aa9.13□□□□□ -0.95
TMCO1-208ENST00000612311 RDM1Q8NG50 284 aa9.13□□□□□ -0.95
TMCO1-208ENST00000612311 DUSP9Q99956 384 aaKnown RBP9.13□□□□□ -0.95
TMCO1-208ENST00000612311 DDX56Q9NY93 547 aaKnown RBP9.13□□□□□ -0.95
TMCO1-208ENST00000612311 IPO11Q9UI26 975 aaKnown RBP9.13□□□□□ -0.95
TMCO1-208ENST00000612311 IFT172Q9UG01 1749 aa9.13□□□□□ -0.95
TMCO1-208ENST00000612311 PI4K2BG5E9Z4 385 aa9.13□□□□□ -0.95
TMCO1-208ENST00000612311 TOM1L1O75674 476 aa9.13□□□□□ -0.95
TMCO1-208ENST00000612311 AKAP3O75969 853 aa9.13□□□□□ -0.95
TMCO1-208ENST00000612311 KRT3P12035 628 aa9.13□□□□□ -0.95
TMCO1-208ENST00000612311 MUTP22033 750 aa9.13□□□□□ -0.95
TMCO1-208ENST00000612311 HOXA10P31260 410 aaPredicted RBP9.13□□□□□ -0.95
TMCO1-208ENST00000612311 HERVK_113P62684 666 aa9.13□□□□□ -0.95
TMCO1-208ENST00000612311 MDM2Q00987 491 aaPredicted RBP9.13□□□□□ -0.95
TMCO1-208ENST00000612311 BYSLQ13895 437 aaKnown RBP9.13□□□□□ -0.95
TMCO1-208ENST00000612311 HP1BP3Q5SSJ5 553 aaPredicted RBP9.13□□□□□ -0.95
TMCO1-208ENST00000612311 DDX42Q86XP3 938 aaKnown RBP eCLIP9.13□□□□□ -0.95
TMCO1-208ENST00000612311 C18orf8Q96DM3 657 aa9.13□□□□□ -0.95
TMCO1-208ENST00000612311 NUDT12Q9BQG2 462 aa9.13□□□□□ -0.95
TMCO1-208ENST00000612311 TARS2Q9BW92 718 aaKnown RBP9.13□□□□□ -0.95
TMCO1-208ENST00000612311 FUT8Q9BYC5 575 aa9.13□□□□□ -0.95
TMCO1-208ENST00000612311 CARD9Q9H257 536 aa9.13□□□□□ -0.95
TMCO1-208ENST00000612311 ELP3Q9H9T3 547 aa9.13□□□□□ -0.95
TMCO1-208ENST00000612311 CYP26B1Q9NR63 512 aa9.13□□□□□ -0.95
TMCO1-208ENST00000612311 DYNC1LI1Q9Y6G9 523 aaKnown RBP9.13□□□□□ -0.95
TMCO1-208ENST00000612311 CAMTA1Q9Y6Y1 1673 aa9.13□□□□□ -0.95
TMCO1-208ENST00000612311 RPS12P25398 132 aaKnown RBP9.13□□□□□ -0.95
TMCO1-208ENST00000612311 IRX4P78413 519 aa9.13□□□□□ -0.95
TMCO1-208ENST00000612311 MMS22LQ6ZRQ5 1243 aa9.13□□□□□ -0.95
TMCO1-208ENST00000612311 TBC1D1Q86TI0 1168 aaPredicted RBP9.13□□□□□ -0.95
TMCO1-208ENST00000612311 RNF139Q8WU17 664 aa9.13□□□□□ -0.95
TMCO1-208ENST00000612311 TTC17Q96AE7 1141 aa9.13□□□□□ -0.95
TMCO1-208ENST00000612311 KIF12Q96FN5 646 aa9.13□□□□□ -0.95
TMCO1-208ENST00000612311 THOC1Q96FV9 657 aaKnown RBP9.13□□□□□ -0.95
TMCO1-208ENST00000612311 KIFC3Q9BVG8 833 aa9.13□□□□□ -0.95
TMCO1-208ENST00000612311 C17orf75Q9HAS0 396 aa9.13□□□□□ -0.95
TMCO1-208ENST00000612311 TACC3Q9Y6A5 838 aa9.13□□□□□ -0.95
TMCO1-208ENST00000612311 UBR1Q8IWV7 1749 aa9.12□□□□□ -0.95
TMCO1-208ENST00000612311 FOXN3O00409 490 aaPredicted RBP9.12□□□□□ -0.95
TMCO1-208ENST00000612311 POLRMTO00411 1230 aaKnown RBP9.12□□□□□ -0.95
TMCO1-208ENST00000612311 PRLRP16471 622 aa9.12□□□□□ -0.95
TMCO1-208ENST00000612311 BMP6P22004 513 aa9.12□□□□□ -0.95
TMCO1-208ENST00000612311 FGFR4P22455 802 aa9.12□□□□□ -0.95
TMCO1-208ENST00000612311 PDIA2Q13087 525 aaKnown RBP9.12□□□□□ -0.95
TMCO1-208ENST00000612311 GRIK5Q16478 980 aa9.12□□□□□ -0.95
TMCO1-208ENST00000612311 KLHL38Q2WGJ6 581 aa9.12□□□□□ -0.95
TMCO1-208ENST00000612311 Q4G0T1 1027 aa9.12□□□□□ -0.95
TMCO1-208ENST00000612311 TRIM68Q6AZZ1 485 aa9.12□□□□□ -0.95
TMCO1-208ENST00000612311 ZNF449Q6P9G9 518 aa9.12□□□□□ -0.95
TMCO1-208ENST00000612311 JAMLQ86YT9 394 aa9.12□□□□□ -0.95
TMCO1-208ENST00000612311 PDCD7Q8N8D1 485 aaKnown RBP9.12□□□□□ -0.95
TMCO1-208ENST00000612311 TPCN2Q8NHX9 752 aa9.12□□□□□ -0.95
TMCO1-208ENST00000612311 SLC16A10Q8TF71 515 aa9.12□□□□□ -0.95
TMCO1-208ENST00000612311 GPRASP2Q96D09 838 aa9.12□□□□□ -0.95
TMCO1-208ENST00000612311 GCOM2Q9BZD3 368 aaPredicted RBP9.12□□□□□ -0.95
TMCO1-208ENST00000612311 GPRC5CQ9NQ84 441 aa9.12□□□□□ -0.95
TMCO1-208ENST00000612311 LRRC10BA6NIK2 292 aa9.12□□□□□ -0.95
TMCO1-208ENST00000612311 COPEO14579 308 aa9.12□□□□□ -0.95
TMCO1-208ENST00000612311 MAPK13O15264 365 aa9.12□□□□□ -0.95
TMCO1-208ENST00000612311 KRT38O76015 456 aa9.12□□□□□ -0.95
TMCO1-208ENST00000612311 GNAT1P11488 350 aa9.12□□□□□ -0.95
TMCO1-208ENST00000612311 CDH6P55285 790 aa9.12□□□□□ -0.95
TMCO1-208ENST00000612311 PSMC6P62333 389 aa9.12□□□□□ -0.95
TMCO1-208ENST00000612311 WDR93Q6P2C0 686 aa9.12□□□□□ -0.95
TMCO1-208ENST00000612311 ZBED8Q8IZ13 594 aa9.12□□□□□ -0.95
TMCO1-208ENST00000612311 C2orf69Q8N8R5 385 aa9.12□□□□□ -0.95
TMCO1-208ENST00000612311 CHMP6Q96FZ7 201 aa9.12□□□□□ -0.95
TMCO1-208ENST00000612311 TMEM117Q9H0C3 514 aa9.12□□□□□ -0.95
TMCO1-208ENST00000612311 BLOC1S4Q9NUP1 217 aa9.12□□□□□ -0.95
TMCO1-208ENST00000612311 TBX20Q9UMR3 447 aa9.12□□□□□ -0.95
TMCO1-208ENST00000612311 PFDN6O15212 129 aa9.12□□□□□ -0.95
TMCO1-208ENST00000612311 MYL3P08590 195 aa9.12□□□□□ -0.95
TMCO1-208ENST00000612311 RFC5P40937 340 aa9.12□□□□□ -0.95
Retrieved 100 of 20,778 RNA–protein pairs in 17.9 ms