RNA–Protein interactions for RNA: ENST00000611712.4

LIG4-204, Transcript of DNA ligase 4, humanhuman

APPRIS P1 TSL 4 BASIC

Gene LIG4, Length 4,180 nt, Biotype protein coding, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
LIG4-204ENST00000611712 ICAM1P05362 532 aa9.27□□□□□ -0.93
LIG4-204ENST00000611712 NR3C2P08235 984 aa9.27□□□□□ -0.93
LIG4-204ENST00000611712 SPDYE6P0CI01 402 aa9.27□□□□□ -0.93
LIG4-204ENST00000611712 ABCD1P33897 745 aa9.27□□□□□ -0.93
LIG4-204ENST00000611712 CAP2P40123 477 aa9.27□□□□□ -0.93
LIG4-204ENST00000611712 PTENP60484 403 aa9.27□□□□□ -0.93
LIG4-204ENST00000611712 SKOR1P84550 965 aa9.27□□□□□ -0.93
LIG4-204ENST00000611712 ZNF844Q08AG5 666 aa9.27□□□□□ -0.93
LIG4-204ENST00000611712 C6orf163Q5TEZ5 329 aa9.27□□□□□ -0.93
LIG4-204ENST00000611712 FAM160B1Q5W0V3 765 aa9.27□□□□□ -0.93
LIG4-204ENST00000611712 SCYL2Q6P3W7 929 aa9.27□□□□□ -0.93
LIG4-204ENST00000611712 PPP1R21Q6ZMI0 780 aa9.27□□□□□ -0.93
LIG4-204ENST00000611712 RHOT1Q8IXI2 618 aa9.27□□□□□ -0.93
LIG4-204ENST00000611712 LPAR1Q92633 364 aa9.27□□□□□ -0.93
LIG4-204ENST00000611712 THOC1Q96FV9 657 aaKnown RBP9.27□□□□□ -0.93
LIG4-204ENST00000611712 PRMT1Q99873 361 aaKnown RBP9.27□□□□□ -0.93
LIG4-204ENST00000611712 TAS2R14Q9NYV8 317 aa9.27□□□□□ -0.93
LIG4-204ENST00000611712 RBAKQ9NYW8 714 aaPredicted RBP9.27□□□□□ -0.93
LIG4-204ENST00000611712 GTF3C4Q9UKN8 822 aa9.27□□□□□ -0.93
LIG4-204ENST00000611712 ADAMTS7Q9UKP4 1686 aa9.27□□□□□ -0.93
LIG4-204ENST00000611712 FRMPD4Q14CM0 1322 aa9.27□□□□□ -0.93
LIG4-204ENST00000611712 RASA4BC9J798 803 aa9.27□□□□□ -0.93
LIG4-204ENST00000611712 RASA4O43374 803 aa9.27□□□□□ -0.93
LIG4-204ENST00000611712 CAND2O75155 1236 aa9.27□□□□□ -0.93
LIG4-204ENST00000611712 PSMD10O75832 226 aa9.27□□□□□ -0.93
LIG4-204ENST00000611712 COILP38432 576 aaPredicted RBP9.27□□□□□ -0.93
LIG4-204ENST00000611712 FAM47EQ6ZV65 393 aa9.27□□□□□ -0.93
LIG4-204ENST00000611712 WRNIP1Q96S55 665 aa9.27□□□□□ -0.93
LIG4-204ENST00000611712 HSD17B14Q9BPX1 270 aa9.27□□□□□ -0.93
LIG4-204ENST00000611712 FAM118BQ9BPY3 351 aa9.27□□□□□ -0.93
LIG4-204ENST00000611712 TMEM117Q9H0C3 514 aa9.27□□□□□ -0.93
LIG4-204ENST00000611712 SDAD1Q9NVU7 687 aaKnown RBP eCLIP9.27□□□□□ -0.93
LIG4-204ENST00000611712 FRMD4AQ9P2Q2 1039 aaPredicted RBP9.27□□□□□ -0.93
LIG4-204ENST00000611712 TBX20Q9UMR3 447 aa9.27□□□□□ -0.93
LIG4-204ENST00000611712 NWD2Q9ULI1 1742 aa9.26□□□□□ -0.93
LIG4-204ENST00000611712 TMEM150BA6NC51 233 aa9.26□□□□□ -0.93
LIG4-204ENST00000611712 CHUKO15111 745 aa9.26□□□□□ -0.93
LIG4-204ENST00000611712 DGAT1O75907 488 aa9.26□□□□□ -0.93
LIG4-204ENST00000611712 NEBLO76041 1014 aa9.26□□□□□ -0.93
LIG4-204ENST00000611712 LDHAP00338 332 aaKnown RBP9.26□□□□□ -0.93
LIG4-204ENST00000611712 TROVE2P10155 538 aaKnown RBP eCLIP9.26□□□□□ -0.93
LIG4-204ENST00000611712 CA4P22748 312 aa9.26□□□□□ -0.93
LIG4-204ENST00000611712 RARRES1P49788 294 aa9.26□□□□□ -0.93
LIG4-204ENST00000611712 ACTN3Q08043 901 aaPredicted RBP9.26□□□□□ -0.93
LIG4-204ENST00000611712 C2CD6Q53TS8 623 aa9.26□□□□□ -0.93
LIG4-204ENST00000611712 PPP1R2P3Q6NXS1 205 aa9.26□□□□□ -0.93
LIG4-204ENST00000611712 TMC3Q7Z5M5 1100 aa9.26□□□□□ -0.93
LIG4-204ENST00000611712 SLC47A2Q86VL8 602 aa9.26□□□□□ -0.93
LIG4-204ENST00000611712 ARHGEF19Q8IW93 802 aa9.26□□□□□ -0.93
LIG4-204ENST00000611712 THNSL1Q8IYQ7 743 aa9.26□□□□□ -0.93
LIG4-204ENST00000611712 IQCKQ8N0W5 287 aa9.26□□□□□ -0.93
LIG4-204ENST00000611712 LNX1Q8TBB1 728 aaPredicted RBP9.26□□□□□ -0.93
LIG4-204ENST00000611712 RAPGEF5Q92565 580 aa9.26□□□□□ -0.93
LIG4-204ENST00000611712 TJP1Q07157 1748 aa9.26□□□□□ -0.93
LIG4-204ENST00000611712 MYH6P13533 1939 aa9.26□□□□□ -0.93
LIG4-204ENST00000611712 PI4K2BG5E9Z4 385 aa9.26□□□□□ -0.93
LIG4-204ENST00000611712 ECM2O94769 699 aaPredicted RBP9.26□□□□□ -0.93
LIG4-204ENST00000611712 TJP3O95049 919 aa9.26□□□□□ -0.93
LIG4-204ENST00000611712 VIL1P09327 827 aaKnown RBP9.26□□□□□ -0.93
LIG4-204ENST00000611712 MARK3P27448 753 aa9.26□□□□□ -0.93
LIG4-204ENST00000611712 HSPA1LP34931 641 aa9.26□□□□□ -0.93
LIG4-204ENST00000611712 CAV1Q03135 178 aa9.26□□□□□ -0.93
LIG4-204ENST00000611712 ASTE1Q2TB18 679 aaPredicted RBP9.26□□□□□ -0.93
LIG4-204ENST00000611712 IZUMO3Q5VZ72 239 aa9.26□□□□□ -0.93
LIG4-204ENST00000611712 ERICH1Q86X53 443 aa9.26□□□□□ -0.93
LIG4-204ENST00000611712 ATL2Q8NHH9 583 aa9.26□□□□□ -0.93
LIG4-204ENST00000611712 TMEM143Q96AN5 459 aa9.26□□□□□ -0.93
LIG4-204ENST00000611712 RPS6KC1Q96S38 1066 aa9.26□□□□□ -0.93
LIG4-204ENST00000611712 CALN1Q9BXU9 219 aa9.26□□□□□ -0.93
LIG4-204ENST00000611712 JPH1Q9HDC5 661 aaPredicted RBP9.26□□□□□ -0.93
LIG4-204ENST00000611712 KLC4Q9NSK0 619 aa9.26□□□□□ -0.93
LIG4-204ENST00000611712 SLC9A2Q9UBY0 812 aa9.26□□□□□ -0.93
LIG4-204ENST00000611712 ZNRF3Q9ULT6 936 aa9.26□□□□□ -0.93
LIG4-204ENST00000611712 RPSAP08865 295 aaKnown RBP9.26□□□□□ -0.93
LIG4-204ENST00000611712 CYP11B1P15538 503 aa9.26□□□□□ -0.93
LIG4-204ENST00000611712 IGBP1P78318 339 aa9.26□□□□□ -0.93
LIG4-204ENST00000611712 KYNUQ16719 465 aa9.26□□□□□ -0.93
LIG4-204ENST00000611712 ANKRD20A3Q5VUR7 823 aa9.26□□□□□ -0.93
LIG4-204ENST00000611712 RFX6Q8HWS3 928 aa9.26□□□□□ -0.93
LIG4-204ENST00000611712 TMEM35BQ8NCS4 154 aa9.26□□□□□ -0.93
LIG4-204ENST00000611712 CCHCR1Q8TD31 782 aa9.26□□□□□ -0.93
LIG4-204ENST00000611712 ELMO3Q96BJ8 720 aa9.26□□□□□ -0.93
LIG4-204ENST00000611712 C9orf72Q96LT7 481 aa9.26□□□□□ -0.93
LIG4-204ENST00000611712 PITPNM3Q9BZ71 974 aa9.26□□□□□ -0.93
LIG4-204ENST00000611712 ZWILCHQ9H900 591 aa9.26□□□□□ -0.93
LIG4-204ENST00000611712 KLHL11Q9NVR0 708 aa9.26□□□□□ -0.93
LIG4-204ENST00000611712 GGT7Q9UJ14 662 aa9.26□□□□□ -0.93
LIG4-204ENST00000611712 VAV3Q9UKW4 847 aa9.26□□□□□ -0.93
LIG4-204ENST00000611712 BTNL10A8MVZ5 291 aa9.25□□□□□ -0.93
LIG4-204ENST00000611712 MYBL1P10243 752 aa9.25□□□□□ -0.93
LIG4-204ENST00000611712 GZMAP12544 262 aa9.25□□□□□ -0.93
LIG4-204ENST00000611712 DLG4P78352 724 aa9.25□□□□□ -0.93
LIG4-204ENST00000611712 MYBPC2Q14324 1141 aa9.25□□□□□ -0.93
LIG4-204ENST00000611712 GADL1Q6ZQY3 521 aa9.25□□□□□ -0.93
LIG4-204ENST00000611712 TAS1R2Q8TE23 839 aa9.25□□□□□ -0.93
LIG4-204ENST00000611712 ATP8B4Q8TF62 1192 aa9.25□□□□□ -0.93
LIG4-204ENST00000611712 SCFD2Q8WU76 684 aa9.25□□□□□ -0.93
LIG4-204ENST00000611712 KAT5Q92993 513 aa9.25□□□□□ -0.93
LIG4-204ENST00000611712 RBM41Q96IZ5 413 aaKnown RBP9.25□□□□□ -0.93
LIG4-204ENST00000611712 TOPORSQ9NS56 1045 aaPredicted RBP9.25□□□□□ -0.93
Retrieved 100 of 20,778 RNA–protein pairs in 17.5 ms