RNA–Protein interactions for RNA: ENST00000610485.1

SNX20-205, Transcript of sorting nexin 20, humanhuman

TSL 5 BASIC

Gene SNX20, Length 557 nt, Biotype protein coding, Subcellular localisation Cytoplasm, Endoplasmic reticulum, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SNX20-205ENST00000610485 HERC4Q5GLZ8 1057 aaPredicted RBP14.17□□□□□ -0.14
SNX20-205ENST00000610485 KIAA0319Q5VV43 1072 aa14.17□□□□□ -0.14
SNX20-205ENST00000610485 FUT10Q6P4F1 479 aa14.17□□□□□ -0.14
SNX20-205ENST00000610485 APBB1IPQ7Z5R6 666 aaPredicted RBP14.17□□□□□ -0.14
SNX20-205ENST00000610485 GPR65Q8IYL9 337 aa14.17□□□□□ -0.14
SNX20-205ENST00000610485 SPIRE2Q8WWL2 714 aa14.17□□□□□ -0.14
SNX20-205ENST00000610485 ACO2Q99798 780 aaKnown RBP14.17□□□□□ -0.14
SNX20-205ENST00000610485 MRPL4Q9BYD3 311 aaKnown RBP14.17□□□□□ -0.14
SNX20-205ENST00000610485 CDT1Q9H211 546 aa14.17□□□□□ -0.14
SNX20-205ENST00000610485 CXCL16Q9H2A7 254 aa14.17□□□□□ -0.14
SNX20-205ENST00000610485 RXFP1Q9HBX9 757 aa14.17□□□□□ -0.14
SNX20-205ENST00000610485 CHST7Q9NS84 486 aa14.17□□□□□ -0.14
SNX20-205ENST00000610485 ADAM28Q9UKQ2 775 aa14.17□□□□□ -0.14
SNX20-205ENST00000610485 FAM86C2PA6NEL3 165 aa14.16□□□□□ -0.14
SNX20-205ENST00000610485 SFI1A8K8P3 1242 aa14.16□□□□□ -0.14
SNX20-205ENST00000610485 K7ELQ4 463 aaPredicted RBP14.16□□□□□ -0.14
SNX20-205ENST00000610485 SLC16A4O15374 487 aa14.16□□□□□ -0.14
SNX20-205ENST00000610485 THP07101 528 aa14.16□□□□□ -0.14
SNX20-205ENST00000610485 PLS3P13797 630 aa14.16□□□□□ -0.14
SNX20-205ENST00000610485 PROZP22891 400 aa14.16□□□□□ -0.14
SNX20-205ENST00000610485 KLRC2P26717 231 aa14.16□□□□□ -0.14
SNX20-205ENST00000610485 UBA7P41226 1012 aa14.16□□□□□ -0.14
SNX20-205ENST00000610485 HSP90AA2PQ14568 343 aaPredicted RBP14.16□□□□□ -0.14
SNX20-205ENST00000610485 ARSHQ5FYA8 562 aa14.16□□□□□ -0.14
SNX20-205ENST00000610485 CES5AQ6NT32 575 aa14.16□□□□□ -0.14
SNX20-205ENST00000610485 LRRC15Q8TF66 581 aa14.16□□□□□ -0.14
SNX20-205ENST00000610485 CALML4Q96GE6 196 aa14.16□□□□□ -0.14
SNX20-205ENST00000610485 RPGRIP1Q96KN7 1286 aa14.16□□□□□ -0.14
SNX20-205ENST00000610485 FBXL18Q96ME1 805 aa14.16□□□□□ -0.14
SNX20-205ENST00000610485 NECTIN4Q96NY8 510 aa14.16□□□□□ -0.14
SNX20-205ENST00000610485 PAAF1Q9BRP4 392 aa14.16□□□□□ -0.14
SNX20-205ENST00000610485 GPR62Q9BZJ7 368 aa14.16□□□□□ -0.14
SNX20-205ENST00000610485 MUTYHQ9UIF7 546 aa14.16□□□□□ -0.14
SNX20-205ENST00000610485 KCNG1Q9UIX4 513 aa14.16□□□□□ -0.14
SNX20-205ENST00000610485 CDH22Q9UJ99 828 aa14.16□□□□□ -0.14
SNX20-205ENST00000610485 GDAQ9Y2T3 454 aa14.16□□□□□ -0.14
SNX20-205ENST00000610485 CASTOR2A6NHX0 329 aa14.15□□□□□ -0.14
SNX20-205ENST00000610485 PRR33A8MZF0 331 aa14.15□□□□□ -0.14
SNX20-205ENST00000610485 C2CD2LO14523 706 aa14.15□□□□□ -0.14
SNX20-205ENST00000610485 ABLIM1O14639 778 aa14.15□□□□□ -0.14
SNX20-205ENST00000610485 TEX28O15482 410 aa14.15□□□□□ -0.14
SNX20-205ENST00000610485 BRD1O95696 1058 aa14.15□□□□□ -0.14
SNX20-205ENST00000610485 GRM5P41594 1212 aa14.15□□□□□ -0.14
SNX20-205ENST00000610485 MTHFRP42898 656 aa14.15□□□□□ -0.14
SNX20-205ENST00000610485 RAD51AP2Q09MP3 1159 aa14.15□□□□□ -0.14
SNX20-205ENST00000610485 PTPAQ15257 358 aa14.15□□□□□ -0.14
SNX20-205ENST00000610485 USP41Q3LFD5 358 aa14.15□□□□□ -0.14
SNX20-205ENST00000610485 ZNF568Q3ZCX4 644 aa14.15□□□□□ -0.14
SNX20-205ENST00000610485 RARS2Q5T160 578 aaKnown RBP14.15□□□□□ -0.14
SNX20-205ENST00000610485 KIAA1841Q6NSI8 718 aa14.15□□□□□ -0.14
SNX20-205ENST00000610485 C12orf76Q8N812 135 aaPredicted RBP14.15□□□□□ -0.14
SNX20-205ENST00000610485 CEP120Q8N960 986 aa14.15□□□□□ -0.14
SNX20-205ENST00000610485 TMEM161BQ8NDZ6 487 aa14.15□□□□□ -0.14
SNX20-205ENST00000610485 RABGGTAQ92696 567 aa14.15□□□□□ -0.14
SNX20-205ENST00000610485 KCNN1Q92952 543 aa14.15□□□□□ -0.14
SNX20-205ENST00000610485 RIPOR3Q96MK2 946 aa14.15□□□□□ -0.14
SNX20-205ENST00000610485 TARS2Q9BW92 718 aaKnown RBP14.15□□□□□ -0.14
SNX20-205ENST00000610485 POMKQ9H5K3 350 aa14.15□□□□□ -0.14
SNX20-205ENST00000610485 SFXN1Q9H9B4 322 aa14.15□□□□□ -0.14
SNX20-205ENST00000610485 BLOC1S4Q9NUP1 217 aa14.15□□□□□ -0.14
SNX20-205ENST00000610485 CACNG4Q9UBN1 327 aa14.15□□□□□ -0.14
SNX20-205ENST00000610485 ODF2LQ9ULJ1 636 aa14.15□□□□□ -0.14
SNX20-205ENST00000610485 CLIC4Q9Y696 253 aa14.15□□□□□ -0.14
SNX20-205ENST00000610485 NCOR1O75376 2440 aa14.15□□□□□ -0.14
SNX20-205ENST00000610485 SF3B1O75533 1304 aaKnown RBP eCLIP14.15□□□□□ -0.15
SNX20-205ENST00000610485 C5orf42Q9H799 3197 aa14.14□□□□□ -0.15
SNX20-205ENST00000610485 NPHP3-ACAD11A0A0J9YXS1 232 aa14.14□□□□□ -0.15
SNX20-205ENST00000610485 TADA2AO75478 443 aa14.14□□□□□ -0.15
SNX20-205ENST00000610485 KIF4AO95239 1232 aa14.14□□□□□ -0.15
SNX20-205ENST00000610485 C1RP00736 705 aa14.14□□□□□ -0.15
SNX20-205ENST00000610485 ADH1AP07327 375 aa14.14□□□□□ -0.15
SNX20-205ENST00000610485 MAPTP10636 758 aaKnown RBP14.14□□□□□ -0.15
SNX20-205ENST00000610485 MCF2P10911 925 aa14.14□□□□□ -0.15
SNX20-205ENST00000610485 PLCG1P19174 1290 aa14.14□□□□□ -0.15
SNX20-205ENST00000610485 SMTNP53814 917 aa14.14□□□□□ -0.15
SNX20-205ENST00000610485 NCKAP1LP55160 1127 aa14.14□□□□□ -0.15
SNX20-205ENST00000610485 XKR4Q5GH76 650 aa14.14□□□□□ -0.15
SNX20-205ENST00000610485 KANK3Q6NY19 840 aa14.14□□□□□ -0.15
SNX20-205ENST00000610485 MPZL3Q6UWV2 235 aa14.14□□□□□ -0.15
SNX20-205ENST00000610485 RAD54LQ92698 747 aa14.14□□□□□ -0.15
SNX20-205ENST00000610485 B3GALT6Q96L58 329 aa14.14□□□□□ -0.15
SNX20-205ENST00000610485 PPP1R10Q96QC0 940 aaKnown RBP14.14□□□□□ -0.15
SNX20-205ENST00000610485 CCDC94Q9BW85 323 aaPredicted RBP14.14□□□□□ -0.15
SNX20-205ENST00000610485 CCSER1Q9C0I3 900 aa14.14□□□□□ -0.15
SNX20-205ENST00000610485 APOBEC3CQ9NRW3 190 aaKnown RBP eCLIP14.14□□□□□ -0.15
SNX20-205ENST00000610485 FNIP2Q9P278 1114 aa14.14□□□□□ -0.15
SNX20-205ENST00000610485 LARSQ9P2J5 1176 aaKnown RBP14.14□□□□□ -0.15
SNX20-205ENST00000610485 MTMR6Q9Y217 621 aa14.14□□□□□ -0.15
SNX20-205ENST00000610485 TMEM189-UBE2V1I3L0A0 370 aa14.13□□□□□ -0.15
SNX20-205ENST00000610485 TOM1L1O75674 476 aa14.13□□□□□ -0.15
SNX20-205ENST00000610485 WEE2P0C1S8 567 aa14.13□□□□□ -0.15
SNX20-205ENST00000610485 ZNF131P52739 623 aa14.13□□□□□ -0.15
SNX20-205ENST00000610485 CACNB1Q02641 598 aaPredicted RBP14.13□□□□□ -0.15
SNX20-205ENST00000610485 CREMQ03060 361 aa14.13□□□□□ -0.15
SNX20-205ENST00000610485 STRN3Q13033 797 aa14.13□□□□□ -0.15
SNX20-205ENST00000610485 KARSQ15046 597 aaKnown RBP14.13□□□□□ -0.15
SNX20-205ENST00000610485 GLRA4Q5JXX5 417 aa14.13□□□□□ -0.15
SNX20-205ENST00000610485 FAM173BQ6P4H8 233 aa14.13□□□□□ -0.15
SNX20-205ENST00000610485 ALKAL1Q6UXT8 129 aa14.13□□□□□ -0.15
SNX20-205ENST00000610485 ZPBP2Q6X784 338 aa14.13□□□□□ -0.15
Retrieved 100 of 20,778 RNA–protein pairs in 22.7 ms