RNA–Protein interactions for RNA: ENST00000609401.5

LINC01278-205, Transcript of long intergenic non-protein coding RNA 1278, humanhuman

TSL 2 BASIC

Gene LINC01278, Length 2,886 nt, Biotype sense overlapping, Subcellular localisation Cytoplasm, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
LINC01278-205ENST00000609401 ZNF398Q8TD17 642 aa10.48□□□□□ -0.73
LINC01278-205ENST00000609401 SPOCK2Q92563 424 aa10.48□□□□□ -0.73
LINC01278-205ENST00000609401 MCUR1Q96AQ8 359 aa10.48□□□□□ -0.73
LINC01278-205ENST00000609401 TUBGCP5Q96RT8 1024 aa10.48□□□□□ -0.73
LINC01278-205ENST00000609401 DCP1AQ9NPI6 582 aaPredicted RBP10.48□□□□□ -0.73
LINC01278-205ENST00000609401 NINJ2Q9NZG7 142 aa10.48□□□□□ -0.73
LINC01278-205ENST00000609401 CACNA1SQ13698 1873 aa10.47□□□□□ -0.73
LINC01278-205ENST00000609401 SLC37A4O43826 429 aa10.47□□□□□ -0.73
LINC01278-205ENST00000609401 EXOC3O60645 756 aa10.47□□□□□ -0.73
LINC01278-205ENST00000609401 CYP2D6P10635 497 aa10.47□□□□□ -0.73
LINC01278-205ENST00000609401 TNFAIP3P21580 790 aa10.47□□□□□ -0.73
LINC01278-205ENST00000609401 MARCKSL1P49006 195 aa10.47□□□□□ -0.73
LINC01278-205ENST00000609401 NR1H3Q13133 447 aa10.47□□□□□ -0.73
LINC01278-205ENST00000609401 CTC1Q2NKJ3 1217 aa10.47□□□□□ -0.73
LINC01278-205ENST00000609401 SLC13A5Q86YT5 568 aaPredicted RBP10.47□□□□□ -0.73
LINC01278-205ENST00000609401 REXO1Q8N1G1 1221 aaKnown RBP10.47□□□□□ -0.73
LINC01278-205ENST00000609401 CRNKL1Q9BZJ0 848 aaKnown RBP10.47□□□□□ -0.73
LINC01278-205ENST00000609401 UBN1Q9NPG3 1134 aa10.47□□□□□ -0.73
LINC01278-205ENST00000609401 IL17RBQ9NRM6 502 aa10.47□□□□□ -0.73
LINC01278-205ENST00000609401 TYW1Q9NV66 732 aaKnown RBP10.47□□□□□ -0.73
LINC01278-205ENST00000609401 BIN2Q9UBW5 565 aaPredicted RBP10.47□□□□□ -0.73
LINC01278-205ENST00000609401 TRAF3IP3Q9Y228 551 aa10.47□□□□□ -0.73
LINC01278-205ENST00000609401 TBC1D30Q9Y2I9 924 aa10.47□□□□□ -0.73
LINC01278-205ENST00000609401 LAMB1P07942 1786 aa10.47□□□□□ -0.73
LINC01278-205ENST00000609401 C10orf71Q711Q0 1435 aa10.47□□□□□ -0.73
LINC01278-205ENST00000609401 GTPBP10A4D1E9 387 aaKnown RBP10.47□□□□□ -0.73
LINC01278-205ENST00000609401 PALM3A6NDB9 673 aaPredicted RBP10.47□□□□□ -0.73
LINC01278-205ENST00000609401 A8MXQ7 604 aa10.47□□□□□ -0.73
LINC01278-205ENST00000609401 TP73O15350 636 aa10.47□□□□□ -0.73
LINC01278-205ENST00000609401 GYG2O15488 501 aa10.47□□□□□ -0.73
LINC01278-205ENST00000609401 ASLP04424 464 aa10.47□□□□□ -0.73
LINC01278-205ENST00000609401 ETS2P15036 469 aa10.47□□□□□ -0.73
LINC01278-205ENST00000609401 NEK3P51956 506 aa10.47□□□□□ -0.73
LINC01278-205ENST00000609401 TMED2Q15363 201 aa10.47□□□□□ -0.73
LINC01278-205ENST00000609401 SBK1Q52WX2 424 aa10.47□□□□□ -0.73
LINC01278-205ENST00000609401 FYB2Q5VWT5 728 aa10.47□□□□□ -0.73
LINC01278-205ENST00000609401 MTDHQ86UE4 582 aaKnown RBP10.47□□□□□ -0.73
LINC01278-205ENST00000609401 KIAA0825Q8IV33 1275 aa10.47□□□□□ -0.73
LINC01278-205ENST00000609401 VPS52Q8N1B4 723 aa10.47□□□□□ -0.73
LINC01278-205ENST00000609401 DENND1AQ8TEH3 1009 aa10.47□□□□□ -0.73
LINC01278-205ENST00000609401 NAT14Q8WUY8 206 aa10.47□□□□□ -0.73
LINC01278-205ENST00000609401 SLCO2A1Q92959 643 aa10.47□□□□□ -0.73
LINC01278-205ENST00000609401 SNF8Q96H20 258 aa10.47□□□□□ -0.73
LINC01278-205ENST00000609401 ASIC3Q9UHC3 531 aa10.47□□□□□ -0.73
LINC01278-205ENST00000609401 ZNF232Q9UNY5 417 aa10.47□□□□□ -0.73
LINC01278-205ENST00000609401 TCRBV7S2A1N4TA0A589 114 aa10.46□□□□□ -0.73
LINC01278-205ENST00000609401 TMEM110-MUSTN1A8MSY1 372 aa10.46□□□□□ -0.73
LINC01278-205ENST00000609401 PRPF4O43172 522 aaKnown RBP eCLIP10.46□□□□□ -0.73
LINC01278-205ENST00000609401 SPAG7O75391 227 aa10.46□□□□□ -0.73
LINC01278-205ENST00000609401 PABPC4LP0CB38 370 aaKnown RBP10.46□□□□□ -0.73
LINC01278-205ENST00000609401 SLC18A1P54219 525 aa10.46□□□□□ -0.73
LINC01278-205ENST00000609401 INHBCP55103 352 aa10.46□□□□□ -0.73
LINC01278-205ENST00000609401 DSG1Q02413 1049 aa10.46□□□□□ -0.73
LINC01278-205ENST00000609401 CAV1Q03135 178 aa10.46□□□□□ -0.73
LINC01278-205ENST00000609401 KRT17Q04695 432 aa10.46□□□□□ -0.73
LINC01278-205ENST00000609401 SIX1Q15475 284 aaPredicted RBP10.46□□□□□ -0.73
LINC01278-205ENST00000609401 TMEM63BQ5T3F8 832 aa10.46□□□□□ -0.73
LINC01278-205ENST00000609401 RNF207Q6ZRF8 634 aa10.46□□□□□ -0.73
LINC01278-205ENST00000609401 LENG1Q96BZ8 264 aaPredicted RBP10.46□□□□□ -0.73
LINC01278-205ENST00000609401 POP1Q99575 1024 aaKnown RBP10.46□□□□□ -0.73
LINC01278-205ENST00000609401 SYT11Q9BT88 431 aa10.46□□□□□ -0.73
LINC01278-205ENST00000609401 MXD3Q9BW11 206 aa10.46□□□□□ -0.73
LINC01278-205ENST00000609401 STK33Q9BYT3 514 aa10.46□□□□□ -0.73
LINC01278-205ENST00000609401 WNT8AQ9H1J5 351 aa10.46□□□□□ -0.73
LINC01278-205ENST00000609401 LRRC19Q9H756 370 aa10.46□□□□□ -0.73
LINC01278-205ENST00000609401 CYLDQ9NQC7 956 aa10.46□□□□□ -0.73
LINC01278-205ENST00000609401 SEPT11Q9NVA2 429 aaKnown RBP10.46□□□□□ -0.73
LINC01278-205ENST00000609401 DNAJC17Q9NVM6 304 aaKnown RBP10.46□□□□□ -0.73
LINC01278-205ENST00000609401 STK32BQ9NY57 414 aa10.46□□□□□ -0.73
LINC01278-205ENST00000609401 EURLQ9NYK6 297 aa10.46□□□□□ -0.73
LINC01278-205ENST00000609401 MTMR7Q9Y216 660 aa10.46□□□□□ -0.73
LINC01278-205ENST00000609401 KDM3AQ9Y4C1 1321 aa10.46□□□□□ -0.74
LINC01278-205ENST00000609401 CALUO43852 315 aaPredicted RBP10.46□□□□□ -0.74
LINC01278-205ENST00000609401 HAUS5O94927 633 aa10.46□□□□□ -0.74
LINC01278-205ENST00000609401 TDP2O95551 362 aa10.46□□□□□ -0.74
LINC01278-205ENST00000609401 SPATA31D3P0C874 917 aa10.46□□□□□ -0.74
LINC01278-205ENST00000609401 PYGMP11217 842 aa10.46□□□□□ -0.74
LINC01278-205ENST00000609401 NT5C2P49902 561 aa10.46□□□□□ -0.74
LINC01278-205ENST00000609401 BPIFB4P59827 614 aa10.46□□□□□ -0.74
LINC01278-205ENST00000609401 CACNB1Q02641 598 aaPredicted RBP10.46□□□□□ -0.74
LINC01278-205ENST00000609401 SPATA31D4Q6ZUB0 917 aa10.46□□□□□ -0.74
LINC01278-205ENST00000609401 DDX55Q8NHQ9 600 aaKnown RBP eCLIP10.46□□□□□ -0.74
LINC01278-205ENST00000609401 MORC4Q8TE76 937 aa10.46□□□□□ -0.74
LINC01278-205ENST00000609401 NSL1Q96IY1 281 aa10.46□□□□□ -0.74
LINC01278-205ENST00000609401 LBHD1Q9BQE6 289 aaPredicted RBP10.46□□□□□ -0.74
LINC01278-205ENST00000609401 TMEM165Q9HC07 324 aa10.46□□□□□ -0.74
LINC01278-205ENST00000609401 ETNK2Q9NVF9 386 aa10.46□□□□□ -0.74
LINC01278-205ENST00000609401 RHBDL2Q9NX52 303 aa10.46□□□□□ -0.74
LINC01278-205ENST00000609401 TMEM260Q9NX78 707 aa10.46□□□□□ -0.74
LINC01278-205ENST00000609401 SMG5Q9UPR3 1016 aaKnown RBP10.46□□□□□ -0.74
LINC01278-205ENST00000609401 ROBO3Q96MS0 1386 aa10.45□□□□□ -0.74
LINC01278-205ENST00000609401 ZMYM2Q9UBW7 1377 aa10.45□□□□□ -0.74
LINC01278-205ENST00000609401 KLRF2D3W0D1 207 aa10.45□□□□□ -0.74
LINC01278-205ENST00000609401 HNRNPRO43390 633 aaKnown RBP10.45□□□□□ -0.74
LINC01278-205ENST00000609401 ITGA2BP08514 1039 aa10.45□□□□□ -0.74
LINC01278-205ENST00000609401 VAV1P15498 845 aa10.45□□□□□ -0.74
LINC01278-205ENST00000609401 CCNFP41002 786 aa10.45□□□□□ -0.74
LINC01278-205ENST00000609401 DEUP1Q05D60 604 aa10.45□□□□□ -0.74
LINC01278-205ENST00000609401 CCDC174Q6PII3 467 aa10.45□□□□□ -0.74
LINC01278-205ENST00000609401 IZUMO2Q6UXV1 221 aa10.45□□□□□ -0.74
Retrieved 100 of 20,778 RNA–protein pairs in 29.2 ms