RNA–Protein interactions for RNA: ENST00000609099.1

LINC01396-201, Transcript of long intergenic non-protein coding RNA 1396, humanhuman

TSL 3 BASIC

Gene LINC01396, Length 527 nt, Biotype lincRNA.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
LINC01396-201ENST00000609099 ZC3H10Q96K80 434 aaKnown RBP9.18□□□□□ -0.94
LINC01396-201ENST00000609099 KAT14Q9H8E8 782 aa9.18□□□□□ -0.94
LINC01396-201ENST00000609099 JADE2Q9NQC1 790 aa9.18□□□□□ -0.94
LINC01396-201ENST00000609099 CACNG4Q9UBN1 327 aa9.18□□□□□ -0.94
LINC01396-201ENST00000609099 KIF26AQ9ULI4 1882 aaPredicted RBP9.18□□□□□ -0.94
LINC01396-201ENST00000609099 FAN1Q9Y2M0 1017 aa9.18□□□□□ -0.94
LINC01396-201ENST00000609099 COL1A2P08123 1366 aa9.17□□□□□ -0.94
LINC01396-201ENST00000609099 CCDC163A0A0D9SF12 145 aa9.17□□□□□ -0.94
LINC01396-201ENST00000609099 LNP1A1A4G5 178 aa9.17□□□□□ -0.94
LINC01396-201ENST00000609099 DHX15O43143 795 aaKnown RBP9.17□□□□□ -0.94
LINC01396-201ENST00000609099 XYLBO75191 536 aa9.17□□□□□ -0.94
LINC01396-201ENST00000609099 IGFBP6P24592 240 aaPredicted RBP9.17□□□□□ -0.94
LINC01396-201ENST00000609099 GPC3P51654 580 aa9.17□□□□□ -0.94
LINC01396-201ENST00000609099 FAM193AP78312 1265 aa9.17□□□□□ -0.94
LINC01396-201ENST00000609099 PTGDRQ13258 359 aa9.17□□□□□ -0.94
LINC01396-201ENST00000609099 GRM2Q14416 872 aa9.17□□□□□ -0.94
LINC01396-201ENST00000609099 MFSD6Q6ZSS7 791 aa9.17□□□□□ -0.94
LINC01396-201ENST00000609099 ZNF843Q8N446 348 aa9.17□□□□□ -0.94
LINC01396-201ENST00000609099 PIBF1Q8WXW3 757 aa9.17□□□□□ -0.94
LINC01396-201ENST00000609099 KCTD12Q96CX2 325 aaKnown RBP9.17□□□□□ -0.94
LINC01396-201ENST00000609099 RSPRY1Q96DX4 576 aa9.17□□□□□ -0.94
LINC01396-201ENST00000609099 TRAIPQ9BWF2 469 aa9.17□□□□□ -0.94
LINC01396-201ENST00000609099 GPR62Q9BZJ7 368 aa9.17□□□□□ -0.94
LINC01396-201ENST00000609099 KCNH7Q9NS40 1196 aa9.17□□□□□ -0.94
LINC01396-201ENST00000609099 MIOSQ9NXC5 875 aa9.17□□□□□ -0.94
LINC01396-201ENST00000609099 DNMT3BQ9UBC3 853 aaKnown RBP9.17□□□□□ -0.94
LINC01396-201ENST00000609099 FBXW11Q9UKB1 542 aa9.17□□□□□ -0.94
LINC01396-201ENST00000609099 PRG3Q9Y2Y8 225 aaPredicted RBP9.17□□□□□ -0.94
LINC01396-201ENST00000609099 TAF6LQ9Y6J9 622 aa9.17□□□□□ -0.94
LINC01396-201ENST00000609099 GON4LQ3T8J9 2241 aa9.17□□□□□ -0.94
LINC01396-201ENST00000609099 SHROOM3Q8TF72 1996 aa9.17□□□□□ -0.94
LINC01396-201ENST00000609099 TNRC6BQ9UPQ9 1833 aaKnown RBP9.17□□□□□ -0.94
LINC01396-201ENST00000609099 PNMA6FA0A0J9YX94 578 aa9.16□□□□□ -0.94
LINC01396-201ENST00000609099 SPAARA0A1B0GVQ0 90 aa9.16□□□□□ -0.94
LINC01396-201ENST00000609099 ADAMTS3O15072 1205 aa9.16□□□□□ -0.94
LINC01396-201ENST00000609099 ZNF862O60290 1169 aa9.16□□□□□ -0.94
LINC01396-201ENST00000609099 HBP1O60381 514 aa9.16□□□□□ -0.94
LINC01396-201ENST00000609099 HNRNPA1P09651 372 aaKnown RBP eCLIP9.16□□□□□ -0.94
LINC01396-201ENST00000609099 CEBPBP17676 345 aa9.16□□□□□ -0.94
LINC01396-201ENST00000609099 SOX9P48436 509 aa9.16□□□□□ -0.94
LINC01396-201ENST00000609099 GLUD2P49448 558 aa9.16□□□□□ -0.94
LINC01396-201ENST00000609099 SRSF1Q07955 248 aaKnown RBP eCLIP9.16□□□□□ -0.94
LINC01396-201ENST00000609099 NMIQ13287 307 aaPredicted RBP9.16□□□□□ -0.94
LINC01396-201ENST00000609099 DGKKQ5KSL6 1271 aa9.16□□□□□ -0.94
LINC01396-201ENST00000609099 UBXN11Q5T124 520 aa9.16□□□□□ -0.94
LINC01396-201ENST00000609099 MAP4K3Q8IVH8 894 aa9.16□□□□□ -0.94
LINC01396-201ENST00000609099 COLGALT2Q8IYK4 626 aa9.16□□□□□ -0.94
LINC01396-201ENST00000609099 URGCPQ8TCY9 931 aa9.16□□□□□ -0.94
LINC01396-201ENST00000609099 ELSPBP1Q96BH3 223 aa9.16□□□□□ -0.94
LINC01396-201ENST00000609099 CEP89Q96ST8 783 aa9.16□□□□□ -0.94
LINC01396-201ENST00000609099 TMEM175Q9BSA9 504 aa9.16□□□□□ -0.94
LINC01396-201ENST00000609099 TRMT61BQ9BVS5 477 aaKnown RBP9.16□□□□□ -0.94
LINC01396-201ENST00000609099 IL25Q9H293 177 aa9.16□□□□□ -0.94
LINC01396-201ENST00000609099 APOBEC3CQ9NRW3 190 aaKnown RBP eCLIP9.16□□□□□ -0.94
LINC01396-201ENST00000609099 KCNH3Q9ULD8 1083 aa9.16□□□□□ -0.94
LINC01396-201ENST00000609099 POLIQ9UNA4 740 aa9.16□□□□□ -0.94
LINC01396-201ENST00000609099 PIAS3Q9Y6X2 628 aa9.16□□□□□ -0.94
LINC01396-201ENST00000609099 TDRD15B5MCY1 1934 aaKnown RBP9.15□□□□□ -0.94
LINC01396-201ENST00000609099 PTPRDP23468 1912 aa9.15□□□□□ -0.94
LINC01396-201ENST00000609099 KIAA1549LQ6ZVL6 1849 aa9.15□□□□□ -0.94
LINC01396-201ENST00000609099 NFASCO94856 1347 aa9.15□□□□□ -0.94
LINC01396-201ENST00000609099 PATE3B3GLJ2 98 aa9.15□□□□□ -0.94
LINC01396-201ENST00000609099 CCL16O15467 120 aa9.15□□□□□ -0.94
LINC01396-201ENST00000609099 EXTL3O43909 919 aa9.15□□□□□ -0.94
LINC01396-201ENST00000609099 HMMRO75330 724 aa9.15□□□□□ -0.94
LINC01396-201ENST00000609099 CCR2P41597 374 aa9.15□□□□□ -0.94
LINC01396-201ENST00000609099 SLC26A2P50443 739 aa9.15□□□□□ -0.94
LINC01396-201ENST00000609099 FOXK1P85037 733 aa9.15□□□□□ -0.94
LINC01396-201ENST00000609099 CREMQ03060 361 aa9.15□□□□□ -0.94
LINC01396-201ENST00000609099 DSC1Q08554 894 aa9.15□□□□□ -0.94
LINC01396-201ENST00000609099 HNRNPDQ14103 355 aaKnown RBP9.15□□□□□ -0.94
LINC01396-201ENST00000609099 CCDC178Q5BJE1 867 aa9.15□□□□□ -0.94
LINC01396-201ENST00000609099 RTP2Q5QGT7 225 aa9.15□□□□□ -0.94
LINC01396-201ENST00000609099 PPM1LQ5SGD2 360 aa9.15□□□□□ -0.94
LINC01396-201ENST00000609099 LIN9Q5TKA1 542 aa9.15□□□□□ -0.94
LINC01396-201ENST00000609099 PDXDC2PQ6P474 469 aa9.15□□□□□ -0.94
LINC01396-201ENST00000609099 PRSS55Q6UWB4 352 aaPredicted RBP9.15□□□□□ -0.94
LINC01396-201ENST00000609099 PLPP6Q8IY26 295 aa9.15□□□□□ -0.94
LINC01396-201ENST00000609099 FAM200AQ8TCP9 573 aa9.15□□□□□ -0.94
LINC01396-201ENST00000609099 RABGGTAQ92696 567 aa9.15□□□□□ -0.94
LINC01396-201ENST00000609099 ESR2Q92731 530 aa9.15□□□□□ -0.94
LINC01396-201ENST00000609099 MSANTD3Q96H12 275 aa9.15□□□□□ -0.94
LINC01396-201ENST00000609099 PGBD1Q96JS3 809 aa9.15□□□□□ -0.94
LINC01396-201ENST00000609099 APOL6Q9BWW8 343 aa9.15□□□□□ -0.94
LINC01396-201ENST00000609099 AGO4Q9HCK5 861 aaKnown RBP9.15□□□□□ -0.94
LINC01396-201ENST00000609099 TRPV5Q9NQA5 729 aa9.15□□□□□ -0.94
LINC01396-201ENST00000609099 CHST12Q9NRB3 414 aa9.15□□□□□ -0.94
LINC01396-201ENST00000609099 GDE1Q9NZC3 331 aa9.15□□□□□ -0.94
LINC01396-201ENST00000609099 KANSL3Q9P2N6 904 aa9.15□□□□□ -0.94
LINC01396-201ENST00000609099 SPTAN1Q13813 2472 aaKnown RBP9.15□□□□□ -0.94
LINC01396-201ENST00000609099 PTPRBP23467 1997 aa9.15□□□□□ -0.95
LINC01396-201ENST00000609099 MYO16Q9Y6X6 1858 aa9.15□□□□□ -0.95
LINC01396-201ENST00000609099 TTC41PQ6P2S7 1318 aa9.14□□□□□ -0.95
LINC01396-201ENST00000609099 BCLAF3A2AJT9 711 aaKnown RBP9.14□□□□□ -0.95
LINC01396-201ENST00000609099 DDX39AO00148 427 aaKnown RBP9.14□□□□□ -0.95
LINC01396-201ENST00000609099 POMCP01189 267 aa9.14□□□□□ -0.95
LINC01396-201ENST00000609099 CCNE1P24864 410 aa9.14□□□□□ -0.95
LINC01396-201ENST00000609099 CFHR1Q03591 330 aa9.14□□□□□ -0.95
LINC01396-201ENST00000609099 LMAN2Q12907 356 aa9.14□□□□□ -0.95
LINC01396-201ENST00000609099 UGCGQ16739 394 aa9.14□□□□□ -0.95
Retrieved 100 of 20,778 RNA–protein pairs in 17.5 ms