RNA–Protein interactions for RNA: ENST00000607388.1

RPF2-204, Transcript of ribosome production factor 2 homolog, humanhuman

TSL 1 (best)

Gene RPF2, Length 3,621 nt, Biotype nonsense mediated decay, Subcellular localisation Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
RPF2-204ENST00000607388 UNC45AQ9H3U1 944 aa6.92□□□□□ -1.3
RPF2-204ENST00000607388 PI4KBQ9UBF8 816 aa6.92□□□□□ -1.3
RPF2-204ENST00000607388 SEPT9Q9UHD8 586 aaPredicted RBP6.92□□□□□ -1.3
RPF2-204ENST00000607388 BZW2Q9Y6E2 419 aaKnown RBP6.92□□□□□ -1.3
RPF2-204ENST00000607388 PASKQ96RG2 1323 aa6.92□□□□□ -1.3
RPF2-204ENST00000607388 PRRC2BQ5JSZ5 2229 aaKnown RBP6.92□□□□□ -1.3
RPF2-204ENST00000607388 CRYBG1Q9Y4K1 1723 aa6.92□□□□□ -1.3
RPF2-204ENST00000607388 NFIBO00712 420 aa6.91□□□□□ -1.3
RPF2-204ENST00000607388 PJA2O43164 708 aa6.91□□□□□ -1.3
RPF2-204ENST00000607388 SUN1O94901 812 aa6.91□□□□□ -1.3
RPF2-204ENST00000607388 CYP3A4P08684 503 aa6.91□□□□□ -1.3
RPF2-204ENST00000607388 BASP1P80723 227 aaKnown RBP6.91□□□□□ -1.3
RPF2-204ENST00000607388 ATP11AP98196 1134 aa6.91□□□□□ -1.3
RPF2-204ENST00000607388 SETDB1Q15047 1291 aa6.91□□□□□ -1.3
RPF2-204ENST00000607388 TMEM119Q4V9L6 283 aa6.91□□□□□ -1.3
RPF2-204ENST00000607388 PRELID2Q8N945 189 aa6.91□□□□□ -1.3
RPF2-204ENST00000607388 AGAP11Q8TF27 550 aa6.91□□□□□ -1.3
RPF2-204ENST00000607388 WDR18Q9BV38 432 aa6.91□□□□□ -1.3
RPF2-204ENST00000607388 NPHS2Q9NP85 383 aa6.91□□□□□ -1.3
RPF2-204ENST00000607388 GINM1Q9NU53 330 aa6.91□□□□□ -1.3
RPF2-204ENST00000607388 AIPL1Q9NZN9 384 aa6.91□□□□□ -1.3
RPF2-204ENST00000607388 AGAP1Q9UPQ3 857 aa6.91□□□□□ -1.3
RPF2-204ENST00000607388 GJA3Q9Y6H8 435 aa6.91□□□□□ -1.3
RPF2-204ENST00000607388 CCDC78A2IDD5 438 aa6.91□□□□□ -1.3
RPF2-204ENST00000607388 PDXKO00764 312 aa6.91□□□□□ -1.3
RPF2-204ENST00000607388 FGRP09769 529 aa6.91□□□□□ -1.3
RPF2-204ENST00000607388 GCFC2P16383 781 aaKnown RBP6.91□□□□□ -1.3
RPF2-204ENST00000607388 NSFP46459 744 aaKnown RBP6.91□□□□□ -1.3
RPF2-204ENST00000607388 ALDH5A1P51649 535 aaPredicted RBP6.91□□□□□ -1.3
RPF2-204ENST00000607388 SKOR1P84550 965 aa6.91□□□□□ -1.3
RPF2-204ENST00000607388 GPS1Q13098 491 aa6.91□□□□□ -1.3
RPF2-204ENST00000607388 ZCWPW2Q504Y3 356 aa6.91□□□□□ -1.3
RPF2-204ENST00000607388 FRMD5Q7Z6J6 570 aa6.91□□□□□ -1.3
RPF2-204ENST00000607388 NOP9Q86U38 636 aaKnown RBP6.91□□□□□ -1.3
RPF2-204ENST00000607388 ZC3H18Q86VM9 953 aaKnown RBP6.91□□□□□ -1.3
RPF2-204ENST00000607388 ERICH1Q86X53 443 aa6.91□□□□□ -1.3
RPF2-204ENST00000607388 COL23A1Q86Y22 540 aaPredicted RBP6.91□□□□□ -1.3
RPF2-204ENST00000607388 TMEM130Q8N3G9 435 aa6.91□□□□□ -1.3
RPF2-204ENST00000607388 IL31RAQ8NI17 732 aa6.91□□□□□ -1.3
RPF2-204ENST00000607388 TMEM143Q96AN5 459 aa6.91□□□□□ -1.3
RPF2-204ENST00000607388 CAMKK2Q96RR4 588 aa6.91□□□□□ -1.3
RPF2-204ENST00000607388 PCDHB18PQ96TA0 734 aa6.91□□□□□ -1.3
RPF2-204ENST00000607388 TEKT3Q9BXF9 490 aa6.91□□□□□ -1.3
RPF2-204ENST00000607388 CALN1Q9BXU9 219 aa6.91□□□□□ -1.3
RPF2-204ENST00000607388 ZNF341Q9BYN7 854 aa6.91□□□□□ -1.3
RPF2-204ENST00000607388 PABPC3Q9H361 631 aaKnown RBP6.91□□□□□ -1.3
RPF2-204ENST00000607388 HSPBP1Q9NZL4 362 aa6.91□□□□□ -1.3
RPF2-204ENST00000607388 SCN11AQ9UI33 1791 aa6.91□□□□□ -1.3
RPF2-204ENST00000607388 SHOX2O60902 331 aaPredicted RBP6.91□□□□□ -1.3
RPF2-204ENST00000607388 RPS6KA5O75582 802 aa6.91□□□□□ -1.3
RPF2-204ENST00000607388 GAS8O95995 478 aa6.91□□□□□ -1.3
RPF2-204ENST00000607388 PLS3P13797 630 aa6.91□□□□□ -1.3
RPF2-204ENST00000607388 PRLRP16471 622 aa6.91□□□□□ -1.3
RPF2-204ENST00000607388 SAT1P21673 171 aa6.91□□□□□ -1.3
RPF2-204ENST00000607388 RWDD2BP57060 319 aa6.91□□□□□ -1.3
RPF2-204ENST00000607388 IGBP1P78318 339 aa6.91□□□□□ -1.3
RPF2-204ENST00000607388 P3H1Q32P28 736 aa6.91□□□□□ -1.3
RPF2-204ENST00000607388 CYP4A22Q5TCH4 519 aa6.91□□□□□ -1.3
RPF2-204ENST00000607388 SCFD2Q8WU76 684 aa6.91□□□□□ -1.3
RPF2-204ENST00000607388 NT5C1BQ96P26 610 aa6.91□□□□□ -1.3
RPF2-204ENST00000607388 STK33Q9BYT3 514 aa6.91□□□□□ -1.3
RPF2-204ENST00000607388 R3HDM2Q9Y2K5 976 aaKnown RBP6.91□□□□□ -1.3
RPF2-204ENST00000607388 IKBKGQ9Y6K9 419 aa6.91□□□□□ -1.3
RPF2-204ENST00000607388 SMCHD1A6NHR9 2005 aa6.91□□□□□ -1.3
RPF2-204ENST00000607388 CCDC160A6NGH7 325 aa6.9□□□□□ -1.3
RPF2-204ENST00000607388 TXNDC9O14530 226 aa6.9□□□□□ -1.3
RPF2-204ENST00000607388 SRGAP2CP0DJJ0 459 aa6.9□□□□□ -1.3
RPF2-204ENST00000607388 POLE2P56282 527 aa6.9□□□□□ -1.3
RPF2-204ENST00000607388 PPP4CP60510 307 aa6.9□□□□□ -1.3
RPF2-204ENST00000607388 CDK17Q00537 523 aa6.9□□□□□ -1.3
RPF2-204ENST00000607388 SLC15A2Q16348 729 aa6.9□□□□□ -1.3
RPF2-204ENST00000607388 IZUMO3Q5VZ72 239 aa6.9□□□□□ -1.3
RPF2-204ENST00000607388 PPP4R3AQ6IN85 833 aa6.9□□□□□ -1.3
RPF2-204ENST00000607388 APBB1IPQ7Z5R6 666 aaPredicted RBP6.9□□□□□ -1.3
RPF2-204ENST00000607388 CYP4X1Q8N118 509 aa6.9□□□□□ -1.3
RPF2-204ENST00000607388 LARGE2Q8N3Y3 721 aa6.9□□□□□ -1.3
RPF2-204ENST00000607388 XXYLT1Q8NBI6 393 aa6.9□□□□□ -1.3
RPF2-204ENST00000607388 PPP1R14CQ8TAE6 165 aa6.9□□□□□ -1.3
RPF2-204ENST00000607388 ZBTB45Q96K62 511 aaPredicted RBP6.9□□□□□ -1.3
RPF2-204ENST00000607388 NACC1Q96RE7 527 aa6.9□□□□□ -1.3
RPF2-204ENST00000607388 CCDC77Q9BR77 488 aa6.9□□□□□ -1.3
RPF2-204ENST00000607388 SLC13A1Q9BZW2 595 aa6.9□□□□□ -1.3
RPF2-204ENST00000607388 DNAJC18Q9H819 358 aa6.9□□□□□ -1.3
RPF2-204ENST00000607388 KMT5AQ9NQR1 393 aa6.9□□□□□ -1.3
RPF2-204ENST00000607388 COL4A1P02462 1669 aa6.9□□□□□ -1.3
RPF2-204ENST00000607388 ZBED4O75132 1171 aa6.9□□□□□ -1.3
RPF2-204ENST00000607388 EYA4O95677 639 aa6.9□□□□□ -1.3
RPF2-204ENST00000607388 CFHP08603 1231 aa6.9□□□□□ -1.3
RPF2-204ENST00000607388 KRT16P08779 473 aa6.9□□□□□ -1.3
RPF2-204ENST00000607388 WEE2P0C1S8 567 aa6.9□□□□□ -1.3
RPF2-204ENST00000607388 DRD4P21917 467 aa6.9□□□□□ -1.3
RPF2-204ENST00000607388 HNRNPH3P31942 346 aaKnown RBP6.9□□□□□ -1.3
RPF2-204ENST00000607388 PIK3CAP42336 1068 aa6.9□□□□□ -1.3
RPF2-204ENST00000607388 LIG4P49917 911 aa6.9□□□□□ -1.3
RPF2-204ENST00000607388 RAD23BP54727 409 aa6.9□□□□□ -1.3
RPF2-204ENST00000607388 YWHAGP61981 247 aaKnown RBP eCLIP6.9□□□□□ -1.3
RPF2-204ENST00000607388 TFAMQ00059 246 aaKnown RBP6.9□□□□□ -1.3
RPF2-204ENST00000607388 CEP55Q53EZ4 464 aa6.9□□□□□ -1.3
RPF2-204ENST00000607388 WDR44Q5JSH3 913 aa6.9□□□□□ -1.3
RPF2-204ENST00000607388 EPM2AIP1Q7L775 607 aaPredicted RBP6.9□□□□□ -1.3
Retrieved 100 of 20,778 RNA–protein pairs in 20.6 ms