RNA–Protein interactions for RNA: ENST00000606752.1

USP6NL-204, Transcript of USP6 N-terminal like, humanhuman

TSL 1 (best)

Gene USP6NL, Length 1,823 nt, Biotype processed transcript, Subcellular localisation Cytosol .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
USP6NL-204ENST00000606752 ASTE1Q2TB18 679 aaPredicted RBP23.38■■□□□ 1.33
USP6NL-204ENST00000606752 TDRD12Q587J7 1177 aaKnown RBP23.38■■□□□ 1.33
USP6NL-204ENST00000606752 IRF2BP2Q7Z5L9 587 aa23.38■■□□□ 1.33
USP6NL-204ENST00000606752 SRGAP1Q7Z6B7 1085 aa23.38■■□□□ 1.33
USP6NL-204ENST00000606752 FBXL13Q8NEE6 735 aa23.38■■□□□ 1.33
USP6NL-204ENST00000606752 SCLT1Q96NL6 688 aa23.38■■□□□ 1.33
USP6NL-204ENST00000606752 BZW2Q9Y6E2 419 aaKnown RBP23.38■■□□□ 1.33
USP6NL-204ENST00000606752 AKR1B10O60218 316 aa23.37■■□□□ 1.33
USP6NL-204ENST00000606752 CYP2C9P11712 490 aa23.37■■□□□ 1.33
USP6NL-204ENST00000606752 ELNP15502 786 aa23.37■■□□□ 1.33
USP6NL-204ENST00000606752 TNNI1P19237 187 aa23.37■■□□□ 1.33
USP6NL-204ENST00000606752 STAT1P42224 750 aa23.37■■□□□ 1.33
USP6NL-204ENST00000606752 KIF11P52732 1056 aa23.37■■□□□ 1.33
USP6NL-204ENST00000606752 ETF1P62495 437 aaKnown RBP23.37■■□□□ 1.33
USP6NL-204ENST00000606752 ARID5AQ03989 594 aa23.37■■□□□ 1.33
USP6NL-204ENST00000606752 SPA17Q15506 151 aa23.37■■□□□ 1.33
USP6NL-204ENST00000606752 C15orf39Q6ZRI6 1047 aa23.37■■□□□ 1.33
USP6NL-204ENST00000606752 GPIHBP1Q8IV16 184 aa23.37■■□□□ 1.33
USP6NL-204ENST00000606752 ZNF516Q92618 1163 aa23.37■■□□□ 1.33
USP6NL-204ENST00000606752 VTI1AQ96AJ9 217 aa23.37■■□□□ 1.33
USP6NL-204ENST00000606752 GPR25O00155 361 aa23.36■■□□□ 1.33
USP6NL-204ENST00000606752 CSDE1O75534 798 aaKnown RBP23.36■■□□□ 1.33
USP6NL-204ENST00000606752 LCA5LO95447 670 aa23.36■■□□□ 1.33
USP6NL-204ENST00000606752 PGK1P00558 417 aa23.36■■□□□ 1.33
USP6NL-204ENST00000606752 GNAT1P11488 350 aa23.36■■□□□ 1.33
USP6NL-204ENST00000606752 WNT7BP56706 349 aa23.36■■□□□ 1.33
USP6NL-204ENST00000606752 HIC1Q14526 733 aa23.36■■□□□ 1.33
USP6NL-204ENST00000606752 DRAP1Q14919 205 aaPredicted RBP23.36■■□□□ 1.33
USP6NL-204ENST00000606752 ZNF568Q3ZCX4 644 aa23.36■■□□□ 1.33
USP6NL-204ENST00000606752 SEZ6Q53EL9 994 aa23.36■■□□□ 1.33
USP6NL-204ENST00000606752 FMNL3Q8IVF7 1028 aa23.36■■□□□ 1.33
USP6NL-204ENST00000606752 BRSK2Q8IWQ3 736 aa23.36■■□□□ 1.33
USP6NL-204ENST00000606752 PPP1R13LQ8WUF5 828 aa23.36■■□□□ 1.33
USP6NL-204ENST00000606752 SEMA4DQ92854 862 aa23.36■■□□□ 1.33
USP6NL-204ENST00000606752 MTG1Q9BT17 334 aaPredicted RBP23.36■■□□□ 1.33
USP6NL-204ENST00000606752 FAM49AQ9H0Q0 323 aaPredicted RBP23.36■■□□□ 1.33
USP6NL-204ENST00000606752 ADAMTS10Q9H324 1103 aa23.36■■□□□ 1.33
USP6NL-204ENST00000606752 LZTFL1Q9NQ48 299 aa23.36■■□□□ 1.33
USP6NL-204ENST00000606752 RAB20Q9NX57 234 aa23.36■■□□□ 1.33
USP6NL-204ENST00000606752 CNTNAP2Q9UHC6 1331 aa23.36■■□□□ 1.33
USP6NL-204ENST00000606752 C17orf102A2RUQ5 167 aa23.36■■□□□ 1.33
USP6NL-204ENST00000606752 F8VZ95 297 aa23.36■■□□□ 1.33
USP6NL-204ENST00000606752 LRRN2O75325 713 aa23.36■■□□□ 1.33
USP6NL-204ENST00000606752 GNRH1P01148 92 aa23.36■■□□□ 1.33
USP6NL-204ENST00000606752 PRKAR2AP13861 404 aaKnown RBP23.36■■□□□ 1.33
USP6NL-204ENST00000606752 PRKCIP41743 596 aa23.36■■□□□ 1.33
USP6NL-204ENST00000606752 EEF1DP3Q658K8 133 aa23.36■■□□□ 1.33
USP6NL-204ENST00000606752 C7orf31Q8N865 590 aa23.36■■□□□ 1.33
USP6NL-204ENST00000606752 TAS1R2Q8TE23 839 aa23.36■■□□□ 1.33
USP6NL-204ENST00000606752 UBE2TQ9NPD8 197 aaPredicted RBP23.36■■□□□ 1.33
USP6NL-204ENST00000606752 HDAC6Q9UBN7 1215 aa23.36■■□□□ 1.33
USP6NL-204ENST00000606752 CPSF3Q9UKF6 684 aaKnown RBP23.36■■□□□ 1.33
USP6NL-204ENST00000606752 CASP8AP2Q9UKL3 1982 aa23.35■■□□□ 1.33
USP6NL-204ENST00000606752 A0A0U1RQJ8 604 aa23.35■■□□□ 1.33
USP6NL-204ENST00000606752 FERP16591 822 aa23.35■■□□□ 1.33
USP6NL-204ENST00000606752 HOXC8P31273 242 aa23.35■■□□□ 1.33
USP6NL-204ENST00000606752 SOX5P35711 763 aa23.35■■□□□ 1.33
USP6NL-204ENST00000606752 TNFSF9P41273 254 aa23.35■■□□□ 1.33
USP6NL-204ENST00000606752 ZACNQ401N2 412 aa23.35■■□□□ 1.33
USP6NL-204ENST00000606752 ARHGAP29Q52LW3 1261 aa23.35■■□□□ 1.33
USP6NL-204ENST00000606752 RUFY4Q6ZNE9 571 aa23.35■■□□□ 1.33
USP6NL-204ENST00000606752 ZNF662Q6ZS27 426 aa23.35■■□□□ 1.33
USP6NL-204ENST00000606752 ATRIPQ8WXE1 791 aa23.35■■□□□ 1.33
USP6NL-204ENST00000606752 ZNF592Q92610 1267 aa23.35■■□□□ 1.33
USP6NL-204ENST00000606752 CGRRF1Q99675 332 aa23.35■■□□□ 1.33
USP6NL-204ENST00000606752 HAUS4Q9H6D7 363 aa23.35■■□□□ 1.33
USP6NL-204ENST00000606752 TREHO43280 583 aa23.34■■□□□ 1.33
USP6NL-204ENST00000606752 GPR32O75388 356 aa23.34■■□□□ 1.33
USP6NL-204ENST00000606752 C4BPAP04003 597 aaKnown RBP23.34■■□□□ 1.33
USP6NL-204ENST00000606752 CCND3P30281 292 aaPredicted RBP23.34■■□□□ 1.33
USP6NL-204ENST00000606752 KIZQ2M2Z5 673 aa23.34■■□□□ 1.33
USP6NL-204ENST00000606752 KIF18AQ8NI77 898 aa23.34■■□□□ 1.33
USP6NL-204ENST00000606752 GCOM2Q9BZD3 368 aaPredicted RBP23.34■■□□□ 1.33
USP6NL-204ENST00000606752 GPR88Q9GZN0 384 aa23.34■■□□□ 1.33
USP6NL-204ENST00000606752 CDT1Q9H211 546 aa23.34■■□□□ 1.33
USP6NL-204ENST00000606752 PAXBP1Q9Y5B6 917 aa23.34■■□□□ 1.33
USP6NL-204ENST00000606752 ZNF263O14978 683 aa23.33■■□□□ 1.33
USP6NL-204ENST00000606752 HMGCRP04035 888 aa23.33■■□□□ 1.33
USP6NL-204ENST00000606752 ARHGAP25P42331 645 aa23.33■■□□□ 1.33
USP6NL-204ENST00000606752 CYP27A1Q02318 531 aa23.33■■□□□ 1.33
USP6NL-204ENST00000606752 SURF1Q15526 300 aa23.33■■□□□ 1.33
USP6NL-204ENST00000606752 SYT10Q6XYQ8 523 aa23.33■■□□□ 1.33
USP6NL-204ENST00000606752 ARHGEF19Q8IW93 802 aa23.33■■□□□ 1.33
USP6NL-204ENST00000606752 THNSL1Q8IYQ7 743 aa23.33■■□□□ 1.33
USP6NL-204ENST00000606752 XPNPEP3Q9NQH7 507 aa23.33■■□□□ 1.33
USP6NL-204ENST00000606752 R3HCC1Q9Y3T6 440 aaKnown RBP23.33■■□□□ 1.33
USP6NL-204ENST00000606752 RBAK-RBAKDNI3L0D1 243 aa23.33■■□□□ 1.32
USP6NL-204ENST00000606752 ADAMTS4O75173 837 aa23.33■■□□□ 1.32
USP6NL-204ENST00000606752 ERLIN2O94905 339 aa23.33■■□□□ 1.32
USP6NL-204ENST00000606752 CCDC172P0C7W6 258 aa23.33■■□□□ 1.32
USP6NL-204ENST00000606752 MCF2P10911 925 aa23.33■■□□□ 1.32
USP6NL-204ENST00000606752 ARF4P18085 180 aaPredicted RBP23.33■■□□□ 1.32
USP6NL-204ENST00000606752 AP3M2P53677 418 aa23.33■■□□□ 1.32
USP6NL-204ENST00000606752 HTRA3P83110 453 aa23.33■■□□□ 1.32
USP6NL-204ENST00000606752 ZNF200P98182 395 aaPredicted RBP23.33■■□□□ 1.32
USP6NL-204ENST00000606752 ENOX2Q16206 610 aaKnown RBP23.33■■□□□ 1.32
USP6NL-204ENST00000606752 ARHGAP44Q17R89 818 aa23.33■■□□□ 1.32
USP6NL-204ENST00000606752 LMBRD2Q68DH5 695 aaPredicted RBP23.33■■□□□ 1.32
USP6NL-204ENST00000606752 CXCL17Q6UXB2 119 aa23.33■■□□□ 1.32
USP6NL-204ENST00000606752 KIAA1328Q86T90 577 aa23.33■■□□□ 1.32
Retrieved 100 of 20,778 RNA–protein pairs in 22 ms