RNA–Protein interactions for RNA: ENST00000604213.1

LYSMD4-211, Transcript of LysM domain containing 4, humanhuman

TSL 1 (best)

Gene LYSMD4, Length 2,356 nt, Biotype processed transcript.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
LYSMD4-211ENST00000604213 GZMAP12544 262 aa16.32■□□□□ 0.2
LYSMD4-211ENST00000604213 SNX1Q13596 522 aa16.32■□□□□ 0.2
LYSMD4-211ENST00000604213 TNIP1Q15025 636 aa16.32■□□□□ 0.2
LYSMD4-211ENST00000604213 LLGL1Q15334 1064 aa16.32■□□□□ 0.2
LYSMD4-211ENST00000604213 TAF11Q15544 211 aa16.32■□□□□ 0.2
LYSMD4-211ENST00000604213 SLC30A10Q6XR72 485 aa16.32■□□□□ 0.2
LYSMD4-211ENST00000604213 ARHGEF18Q6ZSZ5 1173 aa16.32■□□□□ 0.2
LYSMD4-211ENST00000604213 NOP9Q86U38 636 aaKnown RBP16.32■□□□□ 0.2
LYSMD4-211ENST00000604213 GRAMD1AQ96CP6 724 aa16.32■□□□□ 0.2
LYSMD4-211ENST00000604213 SNF8Q96H20 258 aa16.32■□□□□ 0.2
LYSMD4-211ENST00000604213 DYDC2Q96IM9 177 aa16.32■□□□□ 0.2
LYSMD4-211ENST00000604213 TXLNGQ9NUQ3 528 aa16.32■□□□□ 0.2
LYSMD4-211ENST00000604213 EMSYQ7Z589 1322 aa16.32■□□□□ 0.2
LYSMD4-211ENST00000604213 ADGRA3Q8IWK6 1321 aa16.32■□□□□ 0.2
LYSMD4-211ENST00000604213 TULP1O00294 542 aaPredicted RBP16.31■□□□□ 0.2
LYSMD4-211ENST00000604213 ITGA8P53708 1063 aa16.31■□□□□ 0.2
LYSMD4-211ENST00000604213 PTK6Q13882 451 aa16.31■□□□□ 0.2
LYSMD4-211ENST00000604213 PARP6Q2NL67 630 aa16.31■□□□□ 0.2
LYSMD4-211ENST00000604213 SGO2Q562F6 1265 aa16.31■□□□□ 0.2
LYSMD4-211ENST00000604213 SLFN13Q68D06 897 aa16.31■□□□□ 0.2
LYSMD4-211ENST00000604213 STXBP4Q6ZWJ1 553 aa16.31■□□□□ 0.2
LYSMD4-211ENST00000604213 EPS8L1Q8TE68 723 aa16.31■□□□□ 0.2
LYSMD4-211ENST00000604213 FBF1Q8TES7 1133 aa16.31■□□□□ 0.2
LYSMD4-211ENST00000604213 KAT5Q92993 513 aa16.31■□□□□ 0.2
LYSMD4-211ENST00000604213 AMNQ9BXJ7 453 aa16.31■□□□□ 0.2
LYSMD4-211ENST00000604213 NKIRAS1Q9NYS0 192 aa16.31■□□□□ 0.2
LYSMD4-211ENST00000604213 NAALADL1Q9UQQ1 740 aa16.31■□□□□ 0.2
LYSMD4-211ENST00000604213 THAP12O43422 761 aa16.31■□□□□ 0.2
LYSMD4-211ENST00000604213 ICA1Q05084 483 aa16.31■□□□□ 0.2
LYSMD4-211ENST00000604213 PPP3CAQ08209 521 aa16.31■□□□□ 0.2
LYSMD4-211ENST00000604213 STRN3Q13033 797 aa16.31■□□□□ 0.2
LYSMD4-211ENST00000604213 EPC2Q52LR7 807 aa16.31■□□□□ 0.2
LYSMD4-211ENST00000604213 ARHGEF1Q92888 912 aaKnown RBP16.31■□□□□ 0.2
LYSMD4-211ENST00000604213 SAAL1Q96ER3 474 aa16.31■□□□□ 0.2
LYSMD4-211ENST00000604213 NAF1Q96HR8 494 aaKnown RBP16.31■□□□□ 0.2
LYSMD4-211ENST00000604213 FAM167BQ9BTA0 163 aa16.31■□□□□ 0.2
LYSMD4-211ENST00000604213 MYLK2Q9H1R3 596 aa16.31■□□□□ 0.2
LYSMD4-211ENST00000604213 LRMDAQ9H2I8 198 aa16.31■□□□□ 0.2
LYSMD4-211ENST00000604213 LINGO3P0C6S8 592 aa16.3■□□□□ 0.2
LYSMD4-211ENST00000604213 POTEJP0CG39 1038 aa16.3■□□□□ 0.2
LYSMD4-211ENST00000604213 EEF2P13639 858 aaKnown RBP16.3■□□□□ 0.2
LYSMD4-211ENST00000604213 TAL1P17542 331 aaPredicted RBP16.3■□□□□ 0.2
LYSMD4-211ENST00000604213 USH1GQ495M9 461 aa16.3■□□□□ 0.2
LYSMD4-211ENST00000604213 ODR4Q5SWX8 454 aa16.3■□□□□ 0.2
LYSMD4-211ENST00000604213 TMEM63BQ5T3F8 832 aa16.3■□□□□ 0.2
LYSMD4-211ENST00000604213 OTOP1Q7RTM1 612 aa16.3■□□□□ 0.2
LYSMD4-211ENST00000604213 SRRM1Q8IYB3 904 aaKnown RBP16.3■□□□□ 0.2
LYSMD4-211ENST00000604213 PWWP2AQ96N64 755 aa16.3■□□□□ 0.2
LYSMD4-211ENST00000604213 STRA6Q9BX79 667 aa16.3■□□□□ 0.2
LYSMD4-211ENST00000604213 PITPNM3Q9BZ71 974 aa16.3■□□□□ 0.2
LYSMD4-211ENST00000604213 CHST7Q9NS84 486 aa16.3■□□□□ 0.2
LYSMD4-211ENST00000604213 TBK1Q9UHD2 729 aa16.3■□□□□ 0.2
LYSMD4-211ENST00000604213 LRRC42Q9Y546 428 aa16.3■□□□□ 0.2
LYSMD4-211ENST00000604213 IGLV3-22A0A075B6J6 115 aa16.3■□□□□ 0.2
LYSMD4-211ENST00000604213 HIP1RO75146 1068 aa16.3■□□□□ 0.2
LYSMD4-211ENST00000604213 CYP3A4P08684 503 aa16.3■□□□□ 0.2
LYSMD4-211ENST00000604213 CALRP27797 417 aaKnown RBP16.3■□□□□ 0.2
LYSMD4-211ENST00000604213 HOXA13P31271 388 aaPredicted RBP16.3■□□□□ 0.2
LYSMD4-211ENST00000604213 ZNF76P36508 570 aa16.3■□□□□ 0.2
LYSMD4-211ENST00000604213 PPP1R21Q6ZMI0 780 aa16.3■□□□□ 0.2
LYSMD4-211ENST00000604213 SYDE1Q6ZW31 735 aaPredicted RBP16.3■□□□□ 0.2
LYSMD4-211ENST00000604213 FAM71AQ8IYT1 594 aa16.3■□□□□ 0.2
LYSMD4-211ENST00000604213 ATG4AQ8WYN0 398 aa16.3■□□□□ 0.2
LYSMD4-211ENST00000604213 MKL1Q969V6 931 aa16.3■□□□□ 0.2
LYSMD4-211ENST00000604213 RNPEPL1Q9HAU8 725 aa16.3■□□□□ 0.2
LYSMD4-211ENST00000604213 ACP6Q9NPH0 428 aa16.3■□□□□ 0.2
LYSMD4-211ENST00000604213 POLLQ9UGP5 575 aa16.3■□□□□ 0.2
LYSMD4-211ENST00000604213 EME2A4GXA9 379 aaPredicted RBP16.29■□□□□ 0.2
LYSMD4-211ENST00000604213 PEX11AO75192 247 aa16.29■□□□□ 0.2
LYSMD4-211ENST00000604213 WDR4P57081 412 aaKnown RBP16.29■□□□□ 0.2
LYSMD4-211ENST00000604213 GTF2IP78347 998 aa16.29■□□□□ 0.2
LYSMD4-211ENST00000604213 MYBPC2Q14324 1141 aa16.29■□□□□ 0.2
LYSMD4-211ENST00000604213 TRIP13Q15645 432 aaPredicted RBP16.29■□□□□ 0.2
LYSMD4-211ENST00000604213 SHROOM1Q2M3G4 852 aaPredicted RBP16.29■□□□□ 0.2
LYSMD4-211ENST00000604213 C1orf220Q5T0J3 134 aa16.29■□□□□ 0.2
LYSMD4-211ENST00000604213 SYDE2Q5VT97 1194 aa16.29■□□□□ 0.2
LYSMD4-211ENST00000604213 FBXO11Q86XK2 927 aa16.29■□□□□ 0.2
LYSMD4-211ENST00000604213 SYCP3Q8IZU3 236 aa16.29■□□□□ 0.2
LYSMD4-211ENST00000604213 AGGF1Q8N302 714 aaeCLIP16.29■□□□□ 0.2
LYSMD4-211ENST00000604213 ZNF653Q96CK0 615 aa16.29■□□□□ 0.2
LYSMD4-211ENST00000604213 EURLQ9NYK6 297 aa16.29■□□□□ 0.2
LYSMD4-211ENST00000604213 ZFATQ9P243 1243 aa16.29■□□□□ 0.2
LYSMD4-211ENST00000604213 ANAPC5Q9UJX4 755 aa16.29■□□□□ 0.2
LYSMD4-211ENST00000604213 GTF3C4Q9UKN8 822 aa16.29■□□□□ 0.2
LYSMD4-211ENST00000604213 ACTL7BQ9Y614 415 aa16.29■□□□□ 0.2
LYSMD4-211ENST00000604213 CDH16O75309 829 aa16.29■□□□□ 0.2
LYSMD4-211ENST00000604213 ATP5HO75947 161 aa16.29■□□□□ 0.2
LYSMD4-211ENST00000604213 CALB2P22676 271 aa16.29■□□□□ 0.2
LYSMD4-211ENST00000604213 PEX19P40855 299 aa16.29■□□□□ 0.2
LYSMD4-211ENST00000604213 GCLMP48507 274 aa16.29■□□□□ 0.2
LYSMD4-211ENST00000604213 VAMP7P51809 220 aa16.29■□□□□ 0.2
LYSMD4-211ENST00000604213 POLGP54098 1239 aaPredicted RBP16.29■□□□□ 0.2
LYSMD4-211ENST00000604213 FMO1Q01740 532 aa16.29■□□□□ 0.2
LYSMD4-211ENST00000604213 CAV1Q03135 178 aa16.29■□□□□ 0.2
LYSMD4-211ENST00000604213 ADCY1Q08828 1119 aa16.29■□□□□ 0.2
LYSMD4-211ENST00000604213 NSMFQ6X4W1 530 aa16.29■□□□□ 0.2
LYSMD4-211ENST00000604213 FAM47EQ6ZV65 393 aa16.29■□□□□ 0.2
LYSMD4-211ENST00000604213 INTS8Q75QN2 995 aaKnown RBP16.29■□□□□ 0.2
LYSMD4-211ENST00000604213 PTF1AQ7RTS3 328 aa16.29■□□□□ 0.2
LYSMD4-211ENST00000604213 TEX9Q8N6V9 391 aa16.29■□□□□ 0.2
Retrieved 100 of 20,778 RNA–protein pairs in 32.7 ms