RNA–Protein interactions for RNA: ENST00000601816.3

PNKP-216, Transcript of polynucleotide kinase 3'-phosphatase, humanhuman

TSL 3

Gene PNKP, Length 682 nt, Biotype retained intron, Subcellular localisation Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
PNKP-216ENST00000601816 PTGESO14684 152 aa28.64■■■□□ 2.18
PNKP-216ENST00000601816 SLC26A4O43511 780 aa28.64■■■□□ 2.18
PNKP-216ENST00000601816 THP07101 528 aa28.64■■■□□ 2.18
PNKP-216ENST00000601816 PLA2G4BP0C869 781 aa28.64■■■□□ 2.18
PNKP-216ENST00000601816 MTHFRP42898 656 aa28.64■■■□□ 2.18
PNKP-216ENST00000601816 CLCN4P51793 760 aa28.64■■■□□ 2.18
PNKP-216ENST00000601816 RABGGTAQ92696 567 aa28.64■■■□□ 2.18
PNKP-216ENST00000601816 FBXL18Q96ME1 805 aa28.64■■■□□ 2.18
PNKP-216ENST00000601816 RIPOR3Q96MK2 946 aa28.64■■■□□ 2.18
PNKP-216ENST00000601816 MRPL4Q9BYD3 311 aaKnown RBP28.64■■■□□ 2.18
PNKP-216ENST00000601816 RAPGEFL1Q9UHV5 662 aa28.64■■■□□ 2.18
PNKP-216ENST00000601816 ADAM28Q9UKQ2 775 aa28.64■■■□□ 2.18
PNKP-216ENST00000601816 SPDYE4A6NLX3 237 aa28.63■■■□□ 2.17
PNKP-216ENST00000601816 SFI1A8K8P3 1242 aa28.63■■■□□ 2.17
PNKP-216ENST00000601816 PRR33A8MZF0 331 aa28.63■■■□□ 2.17
PNKP-216ENST00000601816 UBA7P41226 1012 aa28.63■■■□□ 2.17
PNKP-216ENST00000601816 SLC12A3P55017 1021 aa28.63■■■□□ 2.17
PNKP-216ENST00000601816 DSG1Q02413 1049 aa28.63■■■□□ 2.17
PNKP-216ENST00000601816 RAD51AP2Q09MP3 1159 aa28.63■■■□□ 2.17
PNKP-216ENST00000601816 HSP90AA2PQ14568 343 aaPredicted RBP28.63■■■□□ 2.17
PNKP-216ENST00000601816 SF3A1Q15459 793 aaKnown RBP28.63■■■□□ 2.17
PNKP-216ENST00000601816 KIAA0319Q5VV43 1072 aa28.63■■■□□ 2.17
PNKP-216ENST00000601816 CALML4Q96GE6 196 aa28.63■■■□□ 2.17
PNKP-216ENST00000601816 SFXN1Q9H9B4 322 aa28.63■■■□□ 2.17
PNKP-216ENST00000601816 KCND2Q9NZV8 630 aa28.63■■■□□ 2.17
PNKP-216ENST00000601816 CACNG4Q9UBN1 327 aa28.63■■■□□ 2.17
PNKP-216ENST00000601816 CASTOR2A6NHX0 329 aa28.62■■■□□ 2.17
PNKP-216ENST00000601816 SLC16A4O15374 487 aa28.62■■■□□ 2.17
PNKP-216ENST00000601816 TADA2AO75478 443 aa28.62■■■□□ 2.17
PNKP-216ENST00000601816 ADH1AP07327 375 aa28.62■■■□□ 2.17
PNKP-216ENST00000601816 ZNF568Q3ZCX4 644 aa28.62■■■□□ 2.17
PNKP-216ENST00000601816 ACO2Q99798 780 aaKnown RBP28.62■■■□□ 2.17
PNKP-216ENST00000601816 GPR62Q9BZJ7 368 aa28.62■■■□□ 2.17
PNKP-216ENST00000601816 POMKQ9H5K3 350 aa28.62■■■□□ 2.17
PNKP-216ENST00000601816 CHST7Q9NS84 486 aa28.62■■■□□ 2.17
PNKP-216ENST00000601816 KCNG1Q9UIX4 513 aa28.62■■■□□ 2.17
PNKP-216ENST00000601816 WEE2P0C1S8 567 aa28.61■■■□□ 2.17
PNKP-216ENST00000601816 PLS3P13797 630 aa28.61■■■□□ 2.17
PNKP-216ENST00000601816 USP41Q3LFD5 358 aa28.61■■■□□ 2.17
PNKP-216ENST00000601816 KANK3Q6NY19 840 aa28.61■■■□□ 2.17
PNKP-216ENST00000601816 TAS1R3Q7RTX0 852 aa28.61■■■□□ 2.17
PNKP-216ENST00000601816 SPIRE2Q8WWL2 714 aa28.61■■■□□ 2.17
PNKP-216ENST00000601816 PAAF1Q9BRP4 392 aa28.61■■■□□ 2.17
PNKP-216ENST00000601816 TARS2Q9BW92 718 aaKnown RBP28.61■■■□□ 2.17
PNKP-216ENST00000601816 CDT1Q9H211 546 aa28.61■■■□□ 2.17
PNKP-216ENST00000601816 CXCL16Q9H2A7 254 aa28.61■■■□□ 2.17
PNKP-216ENST00000601816 RXFP1Q9HBX9 757 aa28.61■■■□□ 2.17
PNKP-216ENST00000601816 TSHZ2Q9NRE2 1034 aa28.61■■■□□ 2.17
PNKP-216ENST00000601816 NR2E1Q9Y466 385 aa28.61■■■□□ 2.17
PNKP-216ENST00000601816 SF3B1O75533 1304 aaKnown RBP eCLIP28.61■■■□□ 2.17
PNKP-216ENST00000601816 TEX28O15482 410 aa28.6■■■□□ 2.17
PNKP-216ENST00000601816 SP100P23497 879 aaPredicted RBP28.6■■■□□ 2.17
PNKP-216ENST00000601816 LONP1P36776 959 aaKnown RBP28.6■■■□□ 2.17
PNKP-216ENST00000601816 SMTNP53814 917 aa28.6■■■□□ 2.17
PNKP-216ENST00000601816 ATAT1Q5SQI0 421 aa28.6■■■□□ 2.17
PNKP-216ENST00000601816 TMC5Q6UXY8 1006 aa28.6■■■□□ 2.17
PNKP-216ENST00000601816 B3GALT6Q96L58 329 aa28.6■■■□□ 2.17
PNKP-216ENST00000601816 NTPCRQ9BSD7 190 aaKnown RBP28.6■■■□□ 2.17
PNKP-216ENST00000601816 CCDC94Q9BW85 323 aaPredicted RBP28.6■■■□□ 2.17
PNKP-216ENST00000601816 GRM5P41594 1212 aa28.59■■■□□ 2.17
PNKP-216ENST00000601816 STRN3Q13033 797 aa28.59■■■□□ 2.17
PNKP-216ENST00000601816 NAB2Q15742 525 aa28.59■■■□□ 2.17
PNKP-216ENST00000601816 GPR65Q8IYL9 337 aa28.59■■■□□ 2.17
PNKP-216ENST00000601816 RASSF8Q8NHQ8 419 aa28.59■■■□□ 2.17
PNKP-216ENST00000601816 HASPINQ8TF76 798 aa28.59■■■□□ 2.17
PNKP-216ENST00000601816 INTS4Q96HW7 963 aaKnown RBP28.59■■■□□ 2.17
PNKP-216ENST00000601816 PTPRHQ9HD43 1115 aa28.59■■■□□ 2.17
PNKP-216ENST00000601816 APOBEC3CQ9NRW3 190 aaKnown RBP eCLIP28.59■■■□□ 2.17
PNKP-216ENST00000601816 HCN4Q9Y3Q4 1203 aa28.59■■■□□ 2.17
PNKP-216ENST00000601816 KIF4AO95239 1232 aa28.58■■■□□ 2.17
PNKP-216ENST00000601816 GLUD1P00367 558 aa28.58■■■□□ 2.17
PNKP-216ENST00000601816 SYT1P21579 422 aa28.58■■■□□ 2.17
PNKP-216ENST00000601816 YARSP54577 528 aaKnown RBP28.58■■■□□ 2.17
PNKP-216ENST00000601816 GRIN1Q05586 938 aa28.58■■■□□ 2.17
PNKP-216ENST00000601816 GLRA4Q5JXX5 417 aa28.58■■■□□ 2.17
PNKP-216ENST00000601816 ELMSAN1Q6PJG2 1045 aa28.58■■■□□ 2.17
PNKP-216ENST00000601816 RIN2Q8WYP3 895 aaPredicted RBP28.58■■■□□ 2.17
PNKP-216ENST00000601816 EDAQ92838 391 aa28.58■■■□□ 2.17
PNKP-216ENST00000601816 TCHPQ9BT92 498 aa28.58■■■□□ 2.17
PNKP-216ENST00000601816 MAN1C1Q9NR34 630 aa28.58■■■□□ 2.17
PNKP-216ENST00000601816 TOPORSQ9NS56 1045 aaPredicted RBP28.58■■■□□ 2.17
PNKP-216ENST00000601816 NPHP3-ACAD11A0A0J9YXS1 232 aa28.57■■■□□ 2.16
PNKP-216ENST00000601816 MCF2P10911 925 aa28.57■■■□□ 2.16
PNKP-216ENST00000601816 CACNB1Q02641 598 aaPredicted RBP28.57■■■□□ 2.16
PNKP-216ENST00000601816 CREMQ03060 361 aa28.57■■■□□ 2.16
PNKP-216ENST00000601816 RESTQ13127 1097 aa28.57■■■□□ 2.16
PNKP-216ENST00000601816 ZBTB33Q86T24 672 aa28.57■■■□□ 2.16
PNKP-216ENST00000601816 GPBP1Q86WP2 473 aa28.57■■■□□ 2.16
PNKP-216ENST00000601816 CEP120Q8N960 986 aa28.57■■■□□ 2.16
PNKP-216ENST00000601816 TMEM161BQ8NDZ6 487 aa28.57■■■□□ 2.16
PNKP-216ENST00000601816 LARSQ9P2J5 1176 aaKnown RBP28.57■■■□□ 2.16
PNKP-216ENST00000601816 DPP7Q9UHL4 492 aa28.57■■■□□ 2.16
PNKP-216ENST00000601816 K7ELQ4 463 aaPredicted RBP28.56■■■□□ 2.16
PNKP-216ENST00000601816 PLCG1P19174 1290 aa28.56■■■□□ 2.16
PNKP-216ENST00000601816 PROZP22891 400 aa28.56■■■□□ 2.16
PNKP-216ENST00000601816 ARSHQ5FYA8 562 aa28.56■■■□□ 2.16
PNKP-216ENST00000601816 MPZL3Q6UWV2 235 aa28.56■■■□□ 2.16
PNKP-216ENST00000601816 GPR149Q86SP6 731 aa28.56■■■□□ 2.16
PNKP-216ENST00000601816 PPP1R10Q96QC0 940 aaKnown RBP28.56■■■□□ 2.16
PNKP-216ENST00000601816 FNIP2Q9P278 1114 aa28.56■■■□□ 2.16
Retrieved 100 of 20,778 RNA–protein pairs in 10.7 ms