RNA–Protein interactions for RNA: ENST00000600628.2

SSBP4-208, Transcript of single stranded DNA binding protein 4, humanhuman

TSL 3

Gene SSBP4, Length 550 nt, Biotype processed transcript, Subcellular localisation Cytoplasm, Cytosol, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SSBP4-208ENST00000600628 THNSL1Q8IYQ7 743 aa9.65□□□□□ -0.86
SSBP4-208ENST00000600628 CEP120Q8N960 986 aa9.65□□□□□ -0.86
SSBP4-208ENST00000600628 MRPL43Q8N983 215 aaKnown RBP9.65□□□□□ -0.86
SSBP4-208ENST00000600628 GADD45GIP1Q8TAE8 222 aaPredicted RBP9.65□□□□□ -0.86
SSBP4-208ENST00000600628 URGCPQ8TCY9 931 aa9.65□□□□□ -0.86
SSBP4-208ENST00000600628 DDX12PQ92771 950 aa9.65□□□□□ -0.86
SSBP4-208ENST00000600628 ZBTB45Q96K62 511 aaPredicted RBP9.65□□□□□ -0.86
SSBP4-208ENST00000600628 UHRF1Q96T88 793 aaPredicted RBP9.65□□□□□ -0.86
SSBP4-208ENST00000600628 TARS2Q9BW92 718 aaKnown RBP9.65□□□□□ -0.86
SSBP4-208ENST00000600628 MRPL4Q9BYD3 311 aaKnown RBP9.65□□□□□ -0.86
SSBP4-208ENST00000600628 CHST7Q9NS84 486 aa9.65□□□□□ -0.86
SSBP4-208ENST00000600628 SNTG2Q9NY99 539 aa9.65□□□□□ -0.86
SSBP4-208ENST00000600628 CLEC1BQ9P126 229 aa9.65□□□□□ -0.86
SSBP4-208ENST00000600628 STK39Q9UEW8 545 aa9.65□□□□□ -0.86
SSBP4-208ENST00000600628 CCDC39Q9UFE4 941 aa9.65□□□□□ -0.86
SSBP4-208ENST00000600628 TBX20Q9UMR3 447 aa9.65□□□□□ -0.86
SSBP4-208ENST00000600628 PCDHGC5Q9Y5F6 944 aa9.65□□□□□ -0.86
SSBP4-208ENST00000600628 A0A0B4J269 797 aa9.64□□□□□ -0.87
SSBP4-208ENST00000600628 FSD2A1L4K1 749 aa9.64□□□□□ -0.87
SSBP4-208ENST00000600628 C2orf71A6NGG8 1288 aa9.64□□□□□ -0.87
SSBP4-208ENST00000600628 HIDE1A8MVS5 230 aa9.64□□□□□ -0.87
SSBP4-208ENST00000600628 NT5C1B-RDH14C9J2C7 533 aa9.64□□□□□ -0.87
SSBP4-208ENST00000600628 F8W810 466 aa9.64□□□□□ -0.87
SSBP4-208ENST00000600628 TMEM189-UBE2V1I3L0A0 370 aa9.64□□□□□ -0.87
SSBP4-208ENST00000600628 TRAK2O60296 914 aa9.64□□□□□ -0.87
SSBP4-208ENST00000600628 CSPG5O95196 566 aa9.64□□□□□ -0.87
SSBP4-208ENST00000600628 C1RP00736 705 aa9.64□□□□□ -0.87
SSBP4-208ENST00000600628 SSBP05455 408 aaKnown RBP eCLIP9.64□□□□□ -0.87
SSBP4-208ENST00000600628 KCNE1P15382 129 aa9.64□□□□□ -0.87
SSBP4-208ENST00000600628 ABCD1P33897 745 aa9.64□□□□□ -0.87
SSBP4-208ENST00000600628 POU5F1Q01860 360 aaKnown RBP9.64□□□□□ -0.87
SSBP4-208ENST00000600628 CACNB1Q02641 598 aaPredicted RBP9.64□□□□□ -0.87
SSBP4-208ENST00000600628 KRT17Q04695 432 aa9.64□□□□□ -0.87
SSBP4-208ENST00000600628 KIAA0319Q5VV43 1072 aa9.64□□□□□ -0.87
SSBP4-208ENST00000600628 RRAGBQ5VZM2 374 aa9.64□□□□□ -0.87
SSBP4-208ENST00000600628 ADALQ6DHV7 355 aa9.64□□□□□ -0.87
SSBP4-208ENST00000600628 SV2BQ7L1I2 683 aa9.64□□□□□ -0.87
SSBP4-208ENST00000600628 HACE1Q8IYU2 909 aa9.64□□□□□ -0.87
SSBP4-208ENST00000600628 SPRYD3Q8NCJ5 442 aa9.64□□□□□ -0.87
SSBP4-208ENST00000600628 MICAL1Q8TDZ2 1067 aa9.64□□□□□ -0.87
SSBP4-208ENST00000600628 LEO1Q8WVC0 666 aaPredicted RBP9.64□□□□□ -0.87
SSBP4-208ENST00000600628 PPP2R3CQ969Q6 453 aa9.64□□□□□ -0.87
SSBP4-208ENST00000600628 ZMAT2Q96NC0 199 aaKnown RBP9.64□□□□□ -0.87
SSBP4-208ENST00000600628 NECAB3Q96P71 396 aaPredicted RBP9.64□□□□□ -0.87
SSBP4-208ENST00000600628 CDCA3Q99618 268 aaPredicted RBP9.64□□□□□ -0.87
SSBP4-208ENST00000600628 PAAF1Q9BRP4 392 aa9.64□□□□□ -0.87
SSBP4-208ENST00000600628 ADPGKQ9BRR6 497 aa9.64□□□□□ -0.87
SSBP4-208ENST00000600628 TNMDQ9H2S6 317 aa9.64□□□□□ -0.87
SSBP4-208ENST00000600628 CLDND1Q9NY35 253 aa9.64□□□□□ -0.87
SSBP4-208ENST00000600628 CNTN3Q9P232 1028 aa9.64□□□□□ -0.87
SSBP4-208ENST00000600628 PUF60Q9UHX1 559 aaKnown RBP9.64□□□□□ -0.87
SSBP4-208ENST00000600628 CFAP45Q9UL16 551 aa9.64□□□□□ -0.87
SSBP4-208ENST00000600628 HPSEQ9Y251 543 aa9.64□□□□□ -0.87
SSBP4-208ENST00000600628 INPP5FQ9Y2H2 1132 aa9.64□□□□□ -0.87
SSBP4-208ENST00000600628 PLXNA3P51805 1871 aa9.64□□□□□ -0.87
SSBP4-208ENST00000600628 TTC26A0AVF1 554 aa9.63□□□□□ -0.87
SSBP4-208ENST00000600628 GRXCR2A6NFK2 248 aa9.63□□□□□ -0.87
SSBP4-208ENST00000600628 H3BQ06 376 aaPredicted RBP9.63□□□□□ -0.87
SSBP4-208ENST00000600628 TNFRSF10AO00220 468 aa9.63□□□□□ -0.87
SSBP4-208ENST00000600628 LINC01565O15544 149 aa9.63□□□□□ -0.87
SSBP4-208ENST00000600628 SOD2P04179 222 aa9.63□□□□□ -0.87
SSBP4-208ENST00000600628 ALDH2P05091 517 aa9.63□□□□□ -0.87
SSBP4-208ENST00000600628 HSP90AA1P07900 732 aaKnown RBP9.63□□□□□ -0.87
SSBP4-208ENST00000600628 GAP43P17677 238 aa9.63□□□□□ -0.87
SSBP4-208ENST00000600628 CMA1P23946 247 aa9.63□□□□□ -0.87
SSBP4-208ENST00000600628 NMT1P30419 496 aaKnown RBP9.63□□□□□ -0.87
SSBP4-208ENST00000600628 TXLNAP40222 546 aa9.63□□□□□ -0.87
SSBP4-208ENST00000600628 SOX4Q06945 474 aaPredicted RBP9.63□□□□□ -0.87
SSBP4-208ENST00000600628 COASYQ13057 564 aa9.63□□□□□ -0.87
SSBP4-208ENST00000600628 TUSC3Q13454 348 aa9.63□□□□□ -0.87
SSBP4-208ENST00000600628 NOLC1Q14978 699 aaKnown RBP eCLIP9.63□□□□□ -0.87
SSBP4-208ENST00000600628 PTPN14Q15678 1187 aa9.63□□□□□ -0.87
SSBP4-208ENST00000600628 ZBTB6Q15916 424 aa9.63□□□□□ -0.87
SSBP4-208ENST00000600628 SLC10A6Q3KNW5 377 aa9.63□□□□□ -0.87
SSBP4-208ENST00000600628 PUS10Q3MIT2 529 aaKnown RBP9.63□□□□□ -0.87
SSBP4-208ENST00000600628 FOXD4L5Q5VV16 416 aaPredicted RBP9.63□□□□□ -0.87
SSBP4-208ENST00000600628 EP400NLQ6ZTU2 488 aa9.63□□□□□ -0.87
SSBP4-208ENST00000600628 SFR1Q86XK3 245 aa9.63□□□□□ -0.87
SSBP4-208ENST00000600628 VPS52Q8N1B4 723 aa9.63□□□□□ -0.87
SSBP4-208ENST00000600628 SMRP1Q8NCR6 262 aa9.63□□□□□ -0.87
SSBP4-208ENST00000600628 FOXD4L4Q8WXT5 416 aaPredicted RBP9.63□□□□□ -0.87
SSBP4-208ENST00000600628 HVCN1Q96D96 273 aa9.63□□□□□ -0.87
SSBP4-208ENST00000600628 TMEM169Q96HH4 297 aa9.63□□□□□ -0.87
SSBP4-208ENST00000600628 CHAMP1Q96JM3 812 aa9.63□□□□□ -0.87
SSBP4-208ENST00000600628 SNX27Q96L92 541 aa9.63□□□□□ -0.87
SSBP4-208ENST00000600628 C7orf25Q9BPX7 421 aa9.63□□□□□ -0.87
SSBP4-208ENST00000600628 TRIM9Q9C026 710 aa9.63□□□□□ -0.87
SSBP4-208ENST00000600628 TRIM6Q9C030 488 aaPredicted RBP9.63□□□□□ -0.87
SSBP4-208ENST00000600628 IGFLR1Q9H665 355 aa9.63□□□□□ -0.87
SSBP4-208ENST00000600628 MAGEF1Q9HAY2 307 aa9.63□□□□□ -0.87
SSBP4-208ENST00000600628 RXFP1Q9HBX9 757 aa9.63□□□□□ -0.87
SSBP4-208ENST00000600628 KLK14Q9P0G3 267 aa9.63□□□□□ -0.87
SSBP4-208ENST00000600628 FAN1Q9Y2M0 1017 aa9.63□□□□□ -0.87
SSBP4-208ENST00000600628 DENND4AQ7Z401 1863 aa9.63□□□□□ -0.87
SSBP4-208ENST00000600628 SMIM28A0A1B0GU29 152 aa9.62□□□□□ -0.87
SSBP4-208ENST00000600628 ANKRD63C9JTQ0 380 aa9.62□□□□□ -0.87
SSBP4-208ENST00000600628 ACTN4O43707 911 aaKnown RBP9.62□□□□□ -0.87
SSBP4-208ENST00000600628 FAM13AO94988 1023 aa9.62□□□□□ -0.87
SSBP4-208ENST00000600628 THP07101 528 aa9.62□□□□□ -0.87
SSBP4-208ENST00000600628 IGFBP6P24592 240 aaPredicted RBP9.62□□□□□ -0.87
Retrieved 100 of 20,778 RNA–protein pairs in 22.3 ms