RNA–Protein interactions for RNA: ENST00000600383.1

HIF3A-218, Transcript of hypoxia inducible factor 3 subunit alpha, humanhuman

TSL 2 BASIC

Gene HIF3A, Length 2,101 nt, Biotype protein coding, Subcellular localisation Cytoplasm, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
HIF3A-218ENST00000600383 ACKR2O00590 384 aa16.4■□□□□ 0.22
HIF3A-218ENST00000600383 ENC1O14682 589 aa16.4■□□□□ 0.22
HIF3A-218ENST00000600383 HOXD8P13378 290 aaPredicted RBP16.4■□□□□ 0.22
HIF3A-218ENST00000600383 GTF2H1P32780 548 aa16.4■□□□□ 0.22
HIF3A-218ENST00000600383 PRKCIP41743 596 aa16.4■□□□□ 0.22
HIF3A-218ENST00000600383 NAP1L1P55209 391 aaKnown RBP16.4■□□□□ 0.22
HIF3A-218ENST00000600383 MBTD1Q05BQ5 628 aa16.4■□□□□ 0.22
HIF3A-218ENST00000600383 MARCH8Q5T0T0 291 aa16.4■□□□□ 0.22
HIF3A-218ENST00000600383 ATF7IP2Q5U623 682 aa16.4■□□□□ 0.22
HIF3A-218ENST00000600383 ZNF662Q6ZS27 426 aa16.4■□□□□ 0.22
HIF3A-218ENST00000600383 VPS36Q86VN1 386 aa16.4■□□□□ 0.22
HIF3A-218ENST00000600383 DNAAF5Q86Y56 855 aa16.4■□□□□ 0.22
HIF3A-218ENST00000600383 THNSL1Q8IYQ7 743 aa16.4■□□□□ 0.22
HIF3A-218ENST00000600383 NLRP7Q8WX94 980 aa16.4■□□□□ 0.22
HIF3A-218ENST00000600383 SECISBP2LQ93073 1101 aaKnown RBP16.4■□□□□ 0.22
HIF3A-218ENST00000600383 AP5M1Q9H0R1 490 aa16.4■□□□□ 0.22
HIF3A-218ENST00000600383 FZD8Q9H461 694 aa16.4■□□□□ 0.22
HIF3A-218ENST00000600383 LUC7LQ9NQ29 371 aaKnown RBP16.4■□□□□ 0.22
HIF3A-218ENST00000600383 RBAK-RBAKDNI3L0D1 243 aa16.4■□□□□ 0.22
HIF3A-218ENST00000600383 PMM2O15305 246 aa16.4■□□□□ 0.22
HIF3A-218ENST00000600383 SLU7O95391 586 aaKnown RBP16.4■□□□□ 0.22
HIF3A-218ENST00000600383 TBC1D8O95759 1140 aa16.4■□□□□ 0.22
HIF3A-218ENST00000600383 MYL3P08590 195 aa16.4■□□□□ 0.22
HIF3A-218ENST00000600383 GTF2F1P35269 517 aaKnown RBP eCLIP16.4■□□□□ 0.22
HIF3A-218ENST00000600383 PHKA2P46019 1235 aa16.4■□□□□ 0.22
HIF3A-218ENST00000600383 MCCD1P59942 119 aaPredicted RBP16.4■□□□□ 0.22
HIF3A-218ENST00000600383 MAP7D2Q96T17 732 aa16.4■□□□□ 0.22
HIF3A-218ENST00000600383 COQ4Q9Y3A0 265 aa16.4■□□□□ 0.22
HIF3A-218ENST00000600383 COL1A2P08123 1366 aa16.4■□□□□ 0.22
HIF3A-218ENST00000600383 KAT6AQ92794 2004 aa16.4■□□□□ 0.22
HIF3A-218ENST00000600383 CCDC172P0C7W6 258 aa16.39■□□□□ 0.21
HIF3A-218ENST00000600383 RFX1P22670 979 aa16.39■□□□□ 0.21
HIF3A-218ENST00000600383 FCGRTP55899 365 aa16.39■□□□□ 0.21
HIF3A-218ENST00000600383 TMEM62Q0P6H9 643 aa16.39■□□□□ 0.21
HIF3A-218ENST00000600383 NAA30Q147X3 362 aaPredicted RBP16.39■□□□□ 0.21
HIF3A-218ENST00000600383 TATDN2Q93075 761 aa16.39■□□□□ 0.21
HIF3A-218ENST00000600383 NT5C1BQ96P26 610 aa16.39■□□□□ 0.21
HIF3A-218ENST00000600383 NAPGQ99747 312 aaPredicted RBP16.39■□□□□ 0.21
HIF3A-218ENST00000600383 PACSIN1Q9BY11 444 aa16.39■□□□□ 0.21
HIF3A-218ENST00000600383 FAM49AQ9H0Q0 323 aaPredicted RBP16.39■□□□□ 0.21
HIF3A-218ENST00000600383 SEPT11Q9NVA2 429 aaKnown RBP16.39■□□□□ 0.21
HIF3A-218ENST00000600383 NOL12Q9UGY1 213 aaKnown RBP eCLIP16.39■□□□□ 0.21
HIF3A-218ENST00000600383 GABRQQ9UN88 632 aa16.39■□□□□ 0.21
HIF3A-218ENST00000600383 V9GYY5 206 aaPredicted RBP16.39■□□□□ 0.21
HIF3A-218ENST00000600383 PTPRJQ12913 1337 aa16.39■□□□□ 0.21
HIF3A-218ENST00000600383 BUB1O43683 1085 aa16.39■□□□□ 0.21
HIF3A-218ENST00000600383 TOMM70O94826 608 aa16.39■□□□□ 0.21
HIF3A-218ENST00000600383 MOCS3O95396 460 aa16.39■□□□□ 0.21
HIF3A-218ENST00000600383 GPC3P51654 580 aa16.39■□□□□ 0.21
HIF3A-218ENST00000600383 ZNF568Q3ZCX4 644 aa16.39■□□□□ 0.21
HIF3A-218ENST00000600383 ALKBH5Q6P6C2 394 aaKnown RBP16.39■□□□□ 0.21
HIF3A-218ENST00000600383 TSHZ1Q6ZSZ6 1077 aa16.39■□□□□ 0.21
HIF3A-218ENST00000600383 LMBR1Q8WVP7 490 aa16.39■□□□□ 0.21
HIF3A-218ENST00000600383 KAT2BQ92831 832 aa16.39■□□□□ 0.21
HIF3A-218ENST00000600383 HHIPL1Q96JK4 782 aa16.39■□□□□ 0.21
HIF3A-218ENST00000600383 NAGPAQ9UK23 515 aa16.39■□□□□ 0.21
HIF3A-218ENST00000600383 ZNF236Q9UL36 1845 aa16.39■□□□□ 0.21
HIF3A-218ENST00000600383 OGTO15294 1046 aa16.38■□□□□ 0.21
HIF3A-218ENST00000600383 CPT1AP50416 773 aa16.38■□□□□ 0.21
HIF3A-218ENST00000600383 MFAP3P55082 362 aa16.38■□□□□ 0.21
HIF3A-218ENST00000600383 LACTBP83111 547 aaPredicted RBP16.38■□□□□ 0.21
HIF3A-218ENST00000600383 EEF1DP3Q658K8 133 aa16.38■□□□□ 0.21
HIF3A-218ENST00000600383 NFRKBQ6P4R8 1299 aa16.38■□□□□ 0.21
HIF3A-218ENST00000600383 MPZL3Q6UWV2 235 aa16.38■□□□□ 0.21
HIF3A-218ENST00000600383 GLYCTKQ8IVS8 523 aa16.38■□□□□ 0.21
HIF3A-218ENST00000600383 KIAA0319LQ8IZA0 1049 aa16.38■□□□□ 0.21
HIF3A-218ENST00000600383 TXLNBQ8N3L3 684 aa16.38■□□□□ 0.21
HIF3A-218ENST00000600383 LINC01465Q8N7H1 131 aa16.38■□□□□ 0.21
HIF3A-218ENST00000600383 LRRN4CLQ8ND94 238 aa16.38■□□□□ 0.21
HIF3A-218ENST00000600383 U2AF1L4Q8WU68 220 aaKnown RBP16.38■□□□□ 0.21
HIF3A-218ENST00000600383 KREMEN1Q96MU8 473 aa16.38■□□□□ 0.21
HIF3A-218ENST00000600383 SALL4Q9UJQ4 1053 aa16.38■□□□□ 0.21
HIF3A-218ENST00000600383 TMCO5BA8MYB1 307 aa16.37■□□□□ 0.21
HIF3A-218ENST00000600383 PHACTR2O75167 634 aa16.37■□□□□ 0.21
HIF3A-218ENST00000600383 ALDH1A1P00352 501 aa16.37■□□□□ 0.21
HIF3A-218ENST00000600383 C4BPAP04003 597 aaKnown RBP16.37■□□□□ 0.21
HIF3A-218ENST00000600383 SMIM10L2AP0DMW4 78 aa16.37■□□□□ 0.21
HIF3A-218ENST00000600383 SMIM10L2BP0DMW5 78 aa16.37■□□□□ 0.21
HIF3A-218ENST00000600383 PIK3CAP42336 1068 aa16.37■□□□□ 0.21
HIF3A-218ENST00000600383 FLT3LGP49771 235 aa16.37■□□□□ 0.21
HIF3A-218ENST00000600383 CLDN10P78369 228 aa16.37■□□□□ 0.21
HIF3A-218ENST00000600383 MCL1Q07820 350 aa16.37■□□□□ 0.21
HIF3A-218ENST00000600383 NOGQ13253 232 aa16.37■□□□□ 0.21
HIF3A-218ENST00000600383 HSP90AA2PQ14568 343 aaPredicted RBP16.37■□□□□ 0.21
HIF3A-218ENST00000600383 TDRD10Q5VZ19 366 aaKnown RBP16.37■□□□□ 0.21
HIF3A-218ENST00000600383 CPB2Q96IY4 423 aa16.37■□□□□ 0.21
HIF3A-218ENST00000600383 CARD6Q9BX69 1037 aa16.37■□□□□ 0.21
HIF3A-218ENST00000600383 PRMT7Q9NVM4 692 aaPredicted RBP16.37■□□□□ 0.21
HIF3A-218ENST00000600383 DAAM1Q9Y4D1 1078 aa16.37■□□□□ 0.21
HIF3A-218ENST00000600383 CNTNAP2Q9UHC6 1331 aa16.37■□□□□ 0.21
HIF3A-218ENST00000600383 RRN3P2A6NIE6 340 aa16.37■□□□□ 0.21
HIF3A-218ENST00000600383 DDX3XO00571 662 aaKnown RBP eCLIP16.37■□□□□ 0.21
HIF3A-218ENST00000600383 DYNC1I1O14576 645 aa16.37■□□□□ 0.21
HIF3A-218ENST00000600383 PJA2O43164 708 aa16.37■□□□□ 0.21
HIF3A-218ENST00000600383 ZEB2O60315 1214 aa16.37■□□□□ 0.21
HIF3A-218ENST00000600383 F2P00734 622 aa16.37■□□□□ 0.21
HIF3A-218ENST00000600383 HLA-DRAP01903 254 aa16.37■□□□□ 0.21
HIF3A-218ENST00000600383 TNFAIP3P21580 790 aa16.37■□□□□ 0.21
HIF3A-218ENST00000600383 MFSD10Q14728 455 aa16.37■□□□□ 0.21
HIF3A-218ENST00000600383 NAB2Q15742 525 aa16.37■□□□□ 0.21
Retrieved 100 of 20,778 RNA–protein pairs in 32.6 ms