RNA–Protein interactions for RNA: ENST00000600026.5

LTBP4-227, Transcript of latent transforming growth factor beta binding protein 4, human

TSL 3

Gene LTBP4, Length 723 nt, Biotype nonsense mediated decay, Subcellular localisation Cytosol .

RNA		Protein				Prediction (catRAPID)		Interaction (ENCODE eCLIP)
Transcript Symbol	Ensembl Transcript ID	Gene	UniProt Accession	Length	Protein Status	Prediction Score	Prediction z-Score	p-Value	Fold Change
LTBP4-227	ENST00000600026	PBX4	Q9BYU1	374 aa		23.97	■■□□□ 1.43
LTBP4-227	ENST00000600026	HAPLN2	Q9GZV7	340 aa		23.97	■■□□□ 1.43
LTBP4-227	ENST00000600026	KCTD10	Q9H3F6	313 aa		23.97	■■□□□ 1.43
LTBP4-227	ENST00000600026	CIT	O14578	2027 aa		23.96	■■□□□ 1.43
LTBP4-227	ENST00000600026	NLRC5	Q86WI3	1866 aa		23.96	■■□□□ 1.43
LTBP4-227	ENST00000600026	MCF2	P10911	925 aa		23.96	■■□□□ 1.43
LTBP4-227	ENST00000600026	ITGA4	P13612	1032 aa		23.96	■■□□□ 1.43
LTBP4-227	ENST00000600026	PBX2	P40425	430 aa		23.96	■■□□□ 1.43
LTBP4-227	ENST00000600026	ZNF165	P49910	485 aa		23.96	■■□□□ 1.43
LTBP4-227	ENST00000600026	SMAD3	P84022	425 aa	Known RBP	23.96	■■□□□ 1.43
LTBP4-227	ENST00000600026	LRRC63	Q05C16	580 aa		23.96	■■□□□ 1.43
LTBP4-227	ENST00000600026	CLLU1OS	Q5K130	101 aa		23.96	■■□□□ 1.43
LTBP4-227	ENST00000600026	CEP120	Q8N960	986 aa		23.96	■■□□□ 1.43
LTBP4-227	ENST00000600026	ZNF689	Q96CS4	500 aa	Predicted RBP	23.96	■■□□□ 1.43
LTBP4-227	ENST00000600026	BPIFA3	Q9BQP9	254 aa		23.96	■■□□□ 1.43
LTBP4-227	ENST00000600026	SEMA6B	Q9H3T3	888 aa		23.96	■■□□□ 1.43
LTBP4-227	ENST00000600026	PCDHA11	Q9Y5I1	949 aa		23.96	■■□□□ 1.43
LTBP4-227	ENST00000600026	TDRD15	B5MCY1	1934 aa	Known RBP	23.95	■■□□□ 1.42
LTBP4-227	ENST00000600026	CLDN3	O15551	220 aa		23.95	■■□□□ 1.42
LTBP4-227	ENST00000600026	HOXA2	O43364	376 aa		23.95	■■□□□ 1.42
LTBP4-227	ENST00000600026	MYOG	P15173	224 aa		23.95	■■□□□ 1.42
LTBP4-227	ENST00000600026	MATR3	P43243	847 aa	Known RBP eCLIP	23.95	■■□□□ 1.42
LTBP4-227	ENST00000600026	STX17	P56962	302 aa		23.95	■■□□□ 1.42
LTBP4-227	ENST00000600026	MCL1	Q07820	350 aa		23.95	■■□□□ 1.42
LTBP4-227	ENST00000600026	RAB30	Q15771	203 aa		23.95	■■□□□ 1.42
LTBP4-227	ENST00000600026	TPD52L1	Q16890	204 aa	Predicted RBP	23.95	■■□□□ 1.42
LTBP4-227	ENST00000600026	AGMO	Q6ZNB7	445 aa		23.95	■■□□□ 1.42
LTBP4-227	ENST00000600026	HACE1	Q8IYU2	909 aa		23.95	■■□□□ 1.42
LTBP4-227	ENST00000600026	HELQ	Q8TDG4	1101 aa		23.95	■■□□□ 1.42
LTBP4-227	ENST00000600026	RNF39	Q9H2S5	420 aa		23.95	■■□□□ 1.42
LTBP4-227	ENST00000600026	RSAD1	Q9HA92	442 aa		23.95	■■□□□ 1.42
LTBP4-227	ENST00000600026	SNTG2	Q9NY99	539 aa		23.95	■■□□□ 1.42
LTBP4-227	ENST00000600026	YBX2	Q9Y2T7	364 aa	Known RBP	23.95	■■□□□ 1.42
LTBP4-227	ENST00000600026	INSL6	Q9Y581	213 aa		23.95	■■□□□ 1.42
LTBP4-227	ENST00000600026		A0A0C4DFX4	3053 aa		23.95	■■□□□ 1.42
LTBP4-227	ENST00000600026	TRIP11	Q15643	1979 aa		23.94	■■□□□ 1.42
LTBP4-227	ENST00000600026	LCHN	A4D1U4	455 aa		23.94	■■□□□ 1.42
LTBP4-227	ENST00000600026	SMTNL1	A8MU46	457 aa		23.94	■■□□□ 1.42
LTBP4-227	ENST00000600026	PAN2	Q504Q3	1202 aa	Known RBP	23.94	■■□□□ 1.42
LTBP4-227	ENST00000600026	SLFN12L	Q6IEE8	588 aa		23.94	■■□□□ 1.42
LTBP4-227	ENST00000600026	FOXR2	Q6PJQ5	311 aa		23.94	■■□□□ 1.42
LTBP4-227	ENST00000600026	SP7	Q8TDD2	431 aa	Predicted RBP	23.94	■■□□□ 1.42
LTBP4-227	ENST00000600026	TRAF3IP3	Q9Y228	551 aa		23.94	■■□□□ 1.42
LTBP4-227	ENST00000600026	STYXL1	Q9Y6J8	313 aa		23.94	■■□□□ 1.42
LTBP4-227	ENST00000600026	PDCD11	Q14690	1871 aa	Known RBP	23.94	■■□□□ 1.42
LTBP4-227	ENST00000600026	TBKBP1	A7MCY6	615 aa		23.93	■■□□□ 1.42
LTBP4-227	ENST00000600026	TGFB1I1	O43294	461 aa		23.93	■■□□□ 1.42
LTBP4-227	ENST00000600026	AKAP5	P24588	427 aa		23.93	■■□□□ 1.42
LTBP4-227	ENST00000600026	GRM5	P41594	1212 aa		23.93	■■□□□ 1.42
LTBP4-227	ENST00000600026	EDRF1	Q3B7T1	1238 aa		23.93	■■□□□ 1.42
LTBP4-227	ENST00000600026	ANKRD40	Q6AI12	368 aa		23.93	■■□□□ 1.42
LTBP4-227	ENST00000600026	CMTR2	Q8IYT2	770 aa	Known RBP	23.93	■■□□□ 1.42
LTBP4-227	ENST00000600026	ENOX1	Q8TC92	643 aa	Known RBP	23.93	■■□□□ 1.42
LTBP4-227	ENST00000600026	FAM200A	Q8TCP9	573 aa		23.93	■■□□□ 1.42
LTBP4-227	ENST00000600026	TMEM117	Q9H0C3	514 aa		23.93	■■□□□ 1.42
LTBP4-227	ENST00000600026	MSRA	Q9UJ68	235 aa		23.93	■■□□□ 1.42
LTBP4-227	ENST00000600026	ANK1	P16157	1881 aa		23.92	■■□□□ 1.42
LTBP4-227	ENST00000600026		A0A0B4J269	797 aa		23.92	■■□□□ 1.42
LTBP4-227	ENST00000600026	TRIM49B	A6NDI0	452 aa		23.92	■■□□□ 1.42
LTBP4-227	ENST00000600026	BECN2	A8MW95	431 aa		23.92	■■□□□ 1.42
LTBP4-227	ENST00000600026	RECQL4	O94761	1208 aa		23.92	■■□□□ 1.42
LTBP4-227	ENST00000600026	FGFR1OP	O95684	399 aa	Known RBP	23.92	■■□□□ 1.42
LTBP4-227	ENST00000600026	CA3	P07451	260 aa		23.92	■■□□□ 1.42
LTBP4-227	ENST00000600026	DNAJB2	P25686	324 aa		23.92	■■□□□ 1.42
LTBP4-227	ENST00000600026	RPL13	P26373	211 aa	Known RBP	23.92	■■□□□ 1.42
LTBP4-227	ENST00000600026	MYL5	Q02045	173 aa		23.92	■■□□□ 1.42
LTBP4-227	ENST00000600026	ZCWPW2	Q504Y3	356 aa		23.92	■■□□□ 1.42
LTBP4-227	ENST00000600026	TTI2	Q6NXR4	508 aa		23.92	■■□□□ 1.42
LTBP4-227	ENST00000600026	ARMCX5	Q6P1M9	558 aa		23.92	■■□□□ 1.42
LTBP4-227	ENST00000600026	THNSL1	Q8IYQ7	743 aa		23.92	■■□□□ 1.42
LTBP4-227	ENST00000600026	ABI1	Q8IZP0	508 aa		23.92	■■□□□ 1.42
LTBP4-227	ENST00000600026	CASD1	Q96PB1	797 aa		23.92	■■□□□ 1.42
LTBP4-227	ENST00000600026	MSTO1	Q9BUK6	570 aa		23.92	■■□□□ 1.42
LTBP4-227	ENST00000600026	NKX2-4	Q9H2Z4	354 aa		23.92	■■□□□ 1.42
LTBP4-227	ENST00000600026	UBN1	Q9NPG3	1134 aa		23.92	■■□□□ 1.42
LTBP4-227	ENST00000600026	AGPAT3	Q9NRZ7	376 aa		23.92	■■□□□ 1.42
LTBP4-227	ENST00000600026	PARP2	Q9UGN5	583 aa		23.92	■■□□□ 1.42
LTBP4-227	ENST00000600026	INPP5F	Q9Y2H2	1132 aa		23.92	■■□□□ 1.42
LTBP4-227	ENST00000600026	GIT1	Q9Y2X7	761 aa		23.92	■■□□□ 1.42
LTBP4-227	ENST00000600026	IKBKB	O14920	756 aa		23.91	■■□□□ 1.42
LTBP4-227	ENST00000600026	CLIC2	O15247	247 aa		23.91	■■□□□ 1.42
LTBP4-227	ENST00000600026	OFD1	O75665	1012 aa		23.91	■■□□□ 1.42
LTBP4-227	ENST00000600026	ARHGEF15	O94989	841 aa		23.91	■■□□□ 1.42
LTBP4-227	ENST00000600026	GART	P22102	1010 aa		23.91	■■□□□ 1.42
LTBP4-227	ENST00000600026	ADSS	P30520	456 aa		23.91	■■□□□ 1.42
LTBP4-227	ENST00000600026	MLH1	P40692	756 aa		23.91	■■□□□ 1.42
LTBP4-227	ENST00000600026	PMS1	P54277	932 aa	Known RBP	23.91	■■□□□ 1.42
LTBP4-227	ENST00000600026	OSTN	P61366	133 aa		23.91	■■□□□ 1.42
LTBP4-227	ENST00000600026	BTG3	Q14201	252 aa	Predicted RBP	23.91	■■□□□ 1.42
LTBP4-227	ENST00000600026	NFIL3	Q16649	462 aa		23.91	■■□□□ 1.42
LTBP4-227	ENST00000600026	SEZ6	Q53EL9	994 aa		23.91	■■□□□ 1.42
LTBP4-227	ENST00000600026	SPATA1	Q5VX52	437 aa		23.91	■■□□□ 1.42
LTBP4-227	ENST00000600026	GLB1L	Q6UWU2	654 aa		23.91	■■□□□ 1.42
LTBP4-227	ENST00000600026	TMEM192	Q8IY95	271 aa		23.91	■■□□□ 1.42
LTBP4-227	ENST00000600026	AOPEP	Q8N6M6	819 aa		23.91	■■□□□ 1.42
LTBP4-227	ENST00000600026	POMGNT1	Q8WZA1	660 aa		23.91	■■□□□ 1.42
LTBP4-227	ENST00000600026	CCDC94	Q9BW85	323 aa	Predicted RBP	23.91	■■□□□ 1.42
LTBP4-227	ENST00000600026	CBX8	Q9HC52	389 aa		23.91	■■□□□ 1.42
LTBP4-227	ENST00000600026	KIAA0391	O15091	583 aa	Known RBP	23.9	■■□□□ 1.42
LTBP4-227	ENST00000600026	OGT	O15294	1046 aa		23.9	■■□□□ 1.42

Retrieved 100 of 20,778 RNA–protein pairs in 28.6 ms