RNA–Protein interactions for RNA: ENST00000599223.5

IRF3-223, Transcript of interferon regulatory factor 3, humanhuman

TSL 1 (best) BASIC

Gene IRF3, Length 1,055 nt, Biotype protein coding, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
IRF3-223ENST00000599223 CCDC113Q9H0I3 377 aa16.25■□□□□ 0.19
IRF3-223ENST00000599223 PARP2Q9UGN5 583 aa16.25■□□□□ 0.19
IRF3-223ENST00000599223 SSX2IPQ9Y2D8 614 aa16.25■□□□□ 0.19
IRF3-223ENST00000599223 GVINP1Q7Z2Y8 2422 aa16.25■□□□□ 0.19
IRF3-223ENST00000599223 NOTCH4Q99466 2003 aa16.24■□□□□ 0.19
IRF3-223ENST00000599223 PTPRZ1P23471 2315 aaPredicted RBP16.24■□□□□ 0.19
IRF3-223ENST00000599223 PROB1E7EW31 1015 aa16.24■□□□□ 0.19
IRF3-223ENST00000599223 ST18O60284 1047 aa16.24■□□□□ 0.19
IRF3-223ENST00000599223 RECQL4O94761 1208 aa16.24■□□□□ 0.19
IRF3-223ENST00000599223 IGFBP6P24592 240 aaPredicted RBP16.24■□□□□ 0.19
IRF3-223ENST00000599223 CLCN5P51795 746 aa16.24■□□□□ 0.19
IRF3-223ENST00000599223 NCBP1Q09161 790 aaKnown RBP16.24■□□□□ 0.19
IRF3-223ENST00000599223 TRIM29Q14134 588 aa16.24■□□□□ 0.19
IRF3-223ENST00000599223 HSP90AA2PQ14568 343 aaPredicted RBP16.24■□□□□ 0.19
IRF3-223ENST00000599223 NAB2Q15742 525 aa16.24■□□□□ 0.19
IRF3-223ENST00000599223 EEF1DP3Q658K8 133 aa16.24■□□□□ 0.19
IRF3-223ENST00000599223 HACE1Q8IYU2 909 aa16.24■□□□□ 0.19
IRF3-223ENST00000599223 SIX5Q8N196 739 aa16.24■□□□□ 0.19
IRF3-223ENST00000599223 ST13P5Q8NFI4 369 aaPredicted RBP16.24■□□□□ 0.19
IRF3-223ENST00000599223 FZD8Q9H461 694 aa16.24■□□□□ 0.19
IRF3-223ENST00000599223 TUFT1Q9NNX1 390 aa16.24■□□□□ 0.19
IRF3-223ENST00000599223 PRMT7Q9NVM4 692 aaPredicted RBP16.24■□□□□ 0.19
IRF3-223ENST00000599223 EPS15L1Q9UBC2 864 aa16.24■□□□□ 0.19
IRF3-223ENST00000599223 WDR87Q6ZQQ6 2873 aa16.24■□□□□ 0.19
IRF3-223ENST00000599223 XRCC6P12956 609 aaKnown RBP eCLIP16.23■□□□□ 0.19
IRF3-223ENST00000599223 AOC1P19801 751 aa16.23■□□□□ 0.19
IRF3-223ENST00000599223 GBP2P32456 591 aaPredicted RBP16.23■□□□□ 0.19
IRF3-223ENST00000599223 TUSC3Q13454 348 aa16.23■□□□□ 0.19
IRF3-223ENST00000599223 FAM187BQ17R55 369 aa16.23■□□□□ 0.19
IRF3-223ENST00000599223 USP41Q3LFD5 358 aa16.23■□□□□ 0.19
IRF3-223ENST00000599223 LILRA6Q6PI73 481 aa16.23■□□□□ 0.19
IRF3-223ENST00000599223 PADI6Q6TGC4 694 aa16.23■□□□□ 0.19
IRF3-223ENST00000599223 GET4Q7L5D6 327 aaPredicted RBP16.23■□□□□ 0.19
IRF3-223ENST00000599223 MCPH1Q8NEM0 835 aa16.23■□□□□ 0.19
IRF3-223ENST00000599223 PRIMPOLQ96LW4 560 aa16.23■□□□□ 0.19
IRF3-223ENST00000599223 POLR3CQ9BUI4 534 aaPredicted RBP16.23■□□□□ 0.19
IRF3-223ENST00000599223 POLD4Q9HCU8 107 aa16.23■□□□□ 0.19
IRF3-223ENST00000599223 SNTG2Q9NY99 539 aa16.23■□□□□ 0.19
IRF3-223ENST00000599223 FNIP2Q9P278 1114 aa16.23■□□□□ 0.19
IRF3-223ENST00000599223 SF3B1O75533 1304 aaKnown RBP eCLIP16.22■□□□□ 0.193e-7■■■■■ 55.1
IRF3-223ENST00000599223 KRBA1A5PL33 1030 aa16.22■□□□□ 0.19
IRF3-223ENST00000599223 PRR23AA6NEV1 266 aa16.22■□□□□ 0.19
IRF3-223ENST00000599223 ADAM12O43184 909 aa16.22■□□□□ 0.19
IRF3-223ENST00000599223 NR1I2O75469 434 aa16.22■□□□□ 0.19
IRF3-223ENST00000599223 CFHP08603 1231 aa16.22■□□□□ 0.19
IRF3-223ENST00000599223 OR52Z1P0C646 297 aa16.22■□□□□ 0.19
IRF3-223ENST00000599223 NBL1P41271 181 aa16.22■□□□□ 0.19
IRF3-223ENST00000599223 NBR1Q14596 966 aa16.22■□□□□ 0.19
IRF3-223ENST00000599223 ZNF174Q15697 407 aa16.22■□□□□ 0.19
IRF3-223ENST00000599223 ECM1Q16610 540 aa16.22■□□□□ 0.19
IRF3-223ENST00000599223 NOSTRINQ8IVI9 506 aa16.22■□□□□ 0.19
IRF3-223ENST00000599223 CCDC83Q8IWF9 413 aa16.22■□□□□ 0.19
IRF3-223ENST00000599223 NT5C3AQ9H0P0 336 aa16.22■□□□□ 0.19
IRF3-223ENST00000599223 IRF2BPLQ9H1B7 796 aa16.22■□□□□ 0.19
IRF3-223ENST00000599223 APOBEC3CQ9NRW3 190 aaKnown RBP eCLIP16.22■□□□□ 0.19
IRF3-223ENST00000599223 IGSF9Q9P2J2 1179 aa16.22■□□□□ 0.19
IRF3-223ENST00000599223 FBXW11Q9UKB1 542 aa16.22■□□□□ 0.19
IRF3-223ENST00000599223 FBXL21Q9UKT6 434 aa16.22■□□□□ 0.19
IRF3-223ENST00000599223 PDCD11Q14690 1871 aaKnown RBP16.21■□□□□ 0.19
IRF3-223ENST00000599223 PRKCBP05771 671 aa16.21■□□□□ 0.19
IRF3-223ENST00000599223 LIG1P18858 919 aa16.21■□□□□ 0.19
IRF3-223ENST00000599223 CYP11B2P19099 503 aa16.21■□□□□ 0.19
IRF3-223ENST00000599223 RPA1P27694 616 aa16.21■□□□□ 0.19
IRF3-223ENST00000599223 PRPF4BQ13523 1007 aaKnown RBP16.21■□□□□ 0.19
IRF3-223ENST00000599223 CYP26C1Q6V0L0 522 aa16.21■□□□□ 0.19
IRF3-223ENST00000599223 FRMD5Q7Z6J6 570 aa16.21■□□□□ 0.19
IRF3-223ENST00000599223 ZBTB8OSQ8IWT0 167 aa16.21■□□□□ 0.19
IRF3-223ENST00000599223 CCDC105Q8IYK2 499 aa16.21■□□□□ 0.19
IRF3-223ENST00000599223 GPR65Q8IYL9 337 aa16.21■□□□□ 0.19
IRF3-223ENST00000599223 HDAC7Q8WUI4 952 aa16.21■□□□□ 0.19
IRF3-223ENST00000599223 STAMQ92783 540 aa16.21■□□□□ 0.19
IRF3-223ENST00000599223 PLEKHA4Q9H4M7 779 aa16.21■□□□□ 0.19
IRF3-223ENST00000599223 ZDHHC7Q9NXF8 308 aa16.21■□□□□ 0.19
IRF3-223ENST00000599223 DMXL1Q9Y485 3027 aa16.2■□□□□ 0.18
IRF3-223ENST00000599223 ARHGEF35A5YM69 484 aa16.2■□□□□ 0.18
IRF3-223ENST00000599223 N4BP3O15049 544 aa16.2■□□□□ 0.18
IRF3-223ENST00000599223 TADA2AO75478 443 aa16.2■□□□□ 0.18
IRF3-223ENST00000599223 ZMYND10O75800 440 aa16.2■□□□□ 0.18
IRF3-223ENST00000599223 NTHL1P78549 312 aa16.2■□□□□ 0.18
IRF3-223ENST00000599223 HTR4Q13639 388 aa16.2■□□□□ 0.18
IRF3-223ENST00000599223 MAPK6Q16659 721 aa16.2■□□□□ 0.18
IRF3-223ENST00000599223 GLRA4Q5JXX5 417 aa16.2■□□□□ 0.18
IRF3-223ENST00000599223 FAM171A1Q5VUB5 890 aa16.2■□□□□ 0.18
IRF3-223ENST00000599223 ELMSAN1Q6PJG2 1045 aa16.2■□□□□ 0.18
IRF3-223ENST00000599223 SLC44A3Q8N4M1 653 aa16.2■□□□□ 0.18
IRF3-223ENST00000599223 LNX1Q8TBB1 728 aaPredicted RBP16.2■□□□□ 0.18
IRF3-223ENST00000599223 PIK3R5Q8WYR1 880 aa16.2■□□□□ 0.18
IRF3-223ENST00000599223 C8orf76Q96K31 380 aa16.2■□□□□ 0.18
IRF3-223ENST00000599223 NACC1Q96RE7 527 aa16.2■□□□□ 0.18
IRF3-223ENST00000599223 CLSTN3Q9BQT9 956 aa16.2■□□□□ 0.18
IRF3-223ENST00000599223 PRKD2Q9BZL6 878 aa16.2■□□□□ 0.18
IRF3-223ENST00000599223 C2orf40Q9H1Z8 148 aa16.2■□□□□ 0.18
IRF3-223ENST00000599223 PIDD1Q9HB75 910 aa16.2■□□□□ 0.18
IRF3-223ENST00000599223 DPP7Q9UHL4 492 aa16.2■□□□□ 0.18
IRF3-223ENST00000599223 CA14Q9ULX7 337 aa16.2■□□□□ 0.18
IRF3-223ENST00000599223 FRYLO94915 3013 aa16.2■□□□□ 0.18
IRF3-223ENST00000599223 MIA3Q5JRA6 1907 aa16.19■□□□□ 0.18
IRF3-223ENST00000599223 CITO14578 2027 aa16.19■□□□□ 0.18
IRF3-223ENST00000599223 ANHXE9PGG2 379 aa16.19■□□□□ 0.18
IRF3-223ENST00000599223 ACKR2O00590 384 aa16.19■□□□□ 0.18
Retrieved 100 of 20,778 RNA–protein pairs in 79 ms