RNA–Protein interactions for RNA: ENST00000598860.1

SMG9-207, Transcript of SMG9, nonsense mediated mRNA decay factor, humanhuman

TSL 2

Gene SMG9, Length 574 nt, Biotype retained intron.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SMG9-207ENST00000598860 ACVR2BQ13705 512 aa11.66□□□□□ -0.54
SMG9-207ENST00000598860 BMS1Q14692 1282 aaKnown RBP11.66□□□□□ -0.54
SMG9-207ENST00000598860 PGM5Q15124 567 aa11.66□□□□□ -0.54
SMG9-207ENST00000598860 EARS2Q5JPH6 523 aaKnown RBP11.66□□□□□ -0.54
SMG9-207ENST00000598860 GJC2Q5T442 439 aaPredicted RBP11.66□□□□□ -0.54
SMG9-207ENST00000598860 FBXW10Q5XX13 1052 aa11.66□□□□□ -0.54
SMG9-207ENST00000598860 NIPA1Q7RTP0 329 aa11.66□□□□□ -0.54
SMG9-207ENST00000598860 FAM169BQ8N8A8 192 aa11.66□□□□□ -0.54
SMG9-207ENST00000598860 PGBD1Q96JS3 809 aa11.66□□□□□ -0.54
SMG9-207ENST00000598860 TAAR1Q96RJ0 339 aa11.66□□□□□ -0.54
SMG9-207ENST00000598860 CEP41Q9BYV8 373 aa11.66□□□□□ -0.54
SMG9-207ENST00000598860 SCAND2PQ9GZW5 306 aaPredicted RBP11.66□□□□□ -0.54
SMG9-207ENST00000598860 ABHD16BQ9H3Z7 469 aa11.66□□□□□ -0.54
SMG9-207ENST00000598860 ZHX1Q9UKY1 873 aaPredicted RBP11.66□□□□□ -0.54
SMG9-207ENST00000598860 CYP3A7-CYP3A51PA0A087WV96 503 aa11.65□□□□□ -0.54
SMG9-207ENST00000598860 CYP3A7P24462 503 aa11.65□□□□□ -0.54
SMG9-207ENST00000598860 EDNRBP24530 442 aa11.65□□□□□ -0.54
SMG9-207ENST00000598860 GIPRP48546 466 aa11.65□□□□□ -0.54
SMG9-207ENST00000598860 LETM2Q2VYF4 491 aa11.65□□□□□ -0.54
SMG9-207ENST00000598860 FDX2Q6P4F2 183 aa11.65□□□□□ -0.54
SMG9-207ENST00000598860 ARMCX2Q7L311 632 aa11.65□□□□□ -0.54
SMG9-207ENST00000598860 RNF180Q86T96 592 aa11.65□□□□□ -0.54
SMG9-207ENST00000598860 NLRX1Q86UT6 975 aa11.65□□□□□ -0.54
SMG9-207ENST00000598860 C7orf61Q8IZ16 206 aa11.65□□□□□ -0.54
SMG9-207ENST00000598860 FGD4Q96M96 766 aa11.65□□□□□ -0.54
SMG9-207ENST00000598860 MBOAT7Q96N66 472 aa11.65□□□□□ -0.54
SMG9-207ENST00000598860 USP28Q96RU2 1077 aa11.65□□□□□ -0.54
SMG9-207ENST00000598860 TRIM55Q9BYV6 548 aa11.65□□□□□ -0.54
SMG9-207ENST00000598860 XPNPEP3Q9NQH7 507 aa11.65□□□□□ -0.54
SMG9-207ENST00000598860 RTEL1Q9NZ71 1219 aa11.65□□□□□ -0.54
SMG9-207ENST00000598860 PCDHB14Q9Y5E9 798 aa11.65□□□□□ -0.54
SMG9-207ENST00000598860 GOLGA6L22H0YM25 854 aa11.64□□□□□ -0.55
SMG9-207ENST00000598860 SMAD7O15105 426 aaKnown RBP11.64□□□□□ -0.55
SMG9-207ENST00000598860 TBX3O15119 743 aa11.64□□□□□ -0.55
SMG9-207ENST00000598860 ZNF862O60290 1169 aa11.64□□□□□ -0.55
SMG9-207ENST00000598860 NEMFO60524 1076 aa11.64□□□□□ -0.55
SMG9-207ENST00000598860 CCNT1O60563 726 aaKnown RBP11.64□□□□□ -0.55
SMG9-207ENST00000598860 IMPDH2P12268 514 aa11.64□□□□□ -0.55
SMG9-207ENST00000598860 NCLP19338 710 aaKnown RBP11.64□□□□□ -0.55
SMG9-207ENST00000598860 TOB1P50616 345 aaPredicted RBP11.64□□□□□ -0.55
SMG9-207ENST00000598860 STK38Q15208 465 aa11.64□□□□□ -0.55
SMG9-207ENST00000598860 LRRC41Q15345 812 aa11.64□□□□□ -0.55
SMG9-207ENST00000598860 STXBP2Q15833 593 aa11.64□□□□□ -0.55
SMG9-207ENST00000598860 GNPTABQ3T906 1256 aa11.64□□□□□ -0.55
SMG9-207ENST00000598860 Q4G0T1 1027 aa11.64□□□□□ -0.55
SMG9-207ENST00000598860 CEP55Q53EZ4 464 aa11.64□□□□□ -0.55
SMG9-207ENST00000598860 WIPI1Q5MNZ9 446 aaPredicted RBP11.64□□□□□ -0.55
SMG9-207ENST00000598860 HP1BP3Q5SSJ5 553 aaPredicted RBP11.64□□□□□ -0.55
SMG9-207ENST00000598860 ANKRD34AQ69YU3 496 aa11.64□□□□□ -0.55
SMG9-207ENST00000598860 FAM173BQ6P4H8 233 aa11.64□□□□□ -0.55
SMG9-207ENST00000598860 MORC4Q8TE76 937 aa11.64□□□□□ -0.55
SMG9-207ENST00000598860 CDHR1Q96JP9 859 aa11.64□□□□□ -0.55
SMG9-207ENST00000598860 CYP4F12Q9HCS2 524 aa11.64□□□□□ -0.55
SMG9-207ENST00000598860 PCDHB6Q9Y5E3 794 aa11.64□□□□□ -0.55
SMG9-207ENST00000598860 FRMPD3Q5JV73 1810 aa11.64□□□□□ -0.55
SMG9-207ENST00000598860 ELP1O95163 1332 aa11.63□□□□□ -0.55
SMG9-207ENST00000598860 MAFGO15525 162 aa11.63□□□□□ -0.55
SMG9-207ENST00000598860 SART1O43290 800 aaKnown RBP11.63□□□□□ -0.55
SMG9-207ENST00000598860 DUSP11O75319 330 aaKnown RBP11.63□□□□□ -0.55
SMG9-207ENST00000598860 EIF3JO75822 258 aaKnown RBP11.63□□□□□ -0.55
SMG9-207ENST00000598860 BAG4O95429 457 aaKnown RBP11.63□□□□□ -0.55
SMG9-207ENST00000598860 PGK1P00558 417 aa11.63□□□□□ -0.55
SMG9-207ENST00000598860 MYCLP12524 364 aaPredicted RBP11.63□□□□□ -0.55
SMG9-207ENST00000598860 PRPHP41219 470 aa11.63□□□□□ -0.55
SMG9-207ENST00000598860 ADCYAP1R1P41586 468 aa11.63□□□□□ -0.55
SMG9-207ENST00000598860 ATP2C1P98194 919 aaPredicted RBP11.63□□□□□ -0.55
SMG9-207ENST00000598860 RAB33AQ14088 237 aa11.63□□□□□ -0.55
SMG9-207ENST00000598860 LRRC26Q2I0M4 334 aa11.63□□□□□ -0.55
SMG9-207ENST00000598860 ARL6IP4Q66PJ3 421 aaKnown RBP11.63□□□□□ -0.55
SMG9-207ENST00000598860 VSIG10LQ86VR7 867 aa11.63□□□□□ -0.55
SMG9-207ENST00000598860 SLFN12Q8IYM2 578 aa11.63□□□□□ -0.55
SMG9-207ENST00000598860 C12orf50Q8NA57 414 aaPredicted RBP11.63□□□□□ -0.55
SMG9-207ENST00000598860 OR6P1Q8NGX9 317 aa11.63□□□□□ -0.55
SMG9-207ENST00000598860 KCNG4Q8TDN1 519 aa11.63□□□□□ -0.55
SMG9-207ENST00000598860 MXRA8Q9BRK3 442 aa11.63□□□□□ -0.55
SMG9-207ENST00000598860 SPC25Q9HBM1 224 aa11.63□□□□□ -0.55
SMG9-207ENST00000598860 SIRPGQ9P1W8 387 aa11.63□□□□□ -0.55
SMG9-207ENST00000598860 DDX25Q9UHL0 483 aaKnown RBP11.63□□□□□ -0.55
SMG9-207ENST00000598860 R3HCC1Q9Y3T6 440 aaKnown RBP11.63□□□□□ -0.55
SMG9-207ENST00000598860 UBIAD1Q9Y5Z9 338 aa11.63□□□□□ -0.55
SMG9-207ENST00000598860 ASTN1O14525 1302 aa11.62□□□□□ -0.55
SMG9-207ENST00000598860 KAT6AQ92794 2004 aa11.62□□□□□ -0.55
SMG9-207ENST00000598860 GFRA2O00451 464 aa11.62□□□□□ -0.55
SMG9-207ENST00000598860 MEIS1O00470 390 aa11.62□□□□□ -0.55
SMG9-207ENST00000598860 FIBPO43427 364 aa11.62□□□□□ -0.55
SMG9-207ENST00000598860 PPP6R2O75170 966 aa11.62□□□□□ -0.55
SMG9-207ENST00000598860 TDP2O95551 362 aa11.62□□□□□ -0.55
SMG9-207ENST00000598860 OR52Z1P0C646 297 aa11.62□□□□□ -0.55
SMG9-207ENST00000598860 MCM7P33993 719 aa11.62□□□□□ -0.55
SMG9-207ENST00000598860 TNFAIP2Q03169 654 aa11.62□□□□□ -0.55
SMG9-207ENST00000598860 INPP5AQ14642 412 aa11.62□□□□□ -0.55
SMG9-207ENST00000598860 SLC39A14Q15043 492 aa11.62□□□□□ -0.55
SMG9-207ENST00000598860 PTPAQ15257 358 aa11.62□□□□□ -0.55
SMG9-207ENST00000598860 ZNF174Q15697 407 aa11.62□□□□□ -0.55
SMG9-207ENST00000598860 CALCRLQ16602 461 aa11.62□□□□□ -0.55
SMG9-207ENST00000598860 IQSEC1Q6DN90 963 aa11.62□□□□□ -0.55
SMG9-207ENST00000598860 KCNV1Q6PIU1 500 aa11.62□□□□□ -0.55
SMG9-207ENST00000598860 LRFN4Q6PJG9 635 aa11.62□□□□□ -0.55
SMG9-207ENST00000598860 SLC39A5Q6ZMH5 540 aa11.62□□□□□ -0.55
SMG9-207ENST00000598860 LSRQ86X29 649 aaPredicted RBP11.62□□□□□ -0.55
Retrieved 100 of 20,778 RNA–protein pairs in 36.2 ms