RNA–Protein interactions for RNA: ENST00000598359.5

SCAF1-203, Transcript of SR-related CTD associated factor 1, humanhuman

APPRIS ALT2 TSL 3

Gene SCAF1, Length 662 nt, Biotype protein coding, Subcellular localisation Cytoplasm, Cytosol, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SCAF1-203ENST00000598359 ZDBF2Q9HCK1 2354 aa15.15■□□□□ 0.02
SCAF1-203ENST00000598359 TDRD15B5MCY1 1934 aaKnown RBP15.14■□□□□ 0.01
SCAF1-203ENST00000598359 K7ERI5 159 aa15.14■□□□□ 0.01
SCAF1-203ENST00000598359 SLC16A4O15374 487 aa15.14■□□□□ 0.01
SCAF1-203ENST00000598359 EFEMP2O95967 443 aa15.14■□□□□ 0.01
SCAF1-203ENST00000598359 URODP06132 367 aa15.14■□□□□ 0.01
SCAF1-203ENST00000598359 CLCN4P51793 760 aa15.14■□□□□ 0.01
SCAF1-203ENST00000598359 EFNA5P52803 228 aa15.14■□□□□ 0.01
SCAF1-203ENST00000598359 GIT2Q14161 759 aa15.14■□□□□ 0.01
SCAF1-203ENST00000598359 HYIQ5T013 277 aa15.14■□□□□ 0.01
SCAF1-203ENST00000598359 TMC5Q6UXY8 1006 aa15.14■□□□□ 0.01
SCAF1-203ENST00000598359 CABP7Q86V35 215 aa15.14■□□□□ 0.01
SCAF1-203ENST00000598359 CEP120Q8N960 986 aa15.14■□□□□ 0.01
SCAF1-203ENST00000598359 LRRC15Q8TF66 581 aa15.14■□□□□ 0.01
SCAF1-203ENST00000598359 ADPGKQ9BRR6 497 aa15.14■□□□□ 0.01
SCAF1-203ENST00000598359 COLEC11Q9BWP8 271 aa15.14■□□□□ 0.01
SCAF1-203ENST00000598359 EMILIN2Q9BXX0 1053 aa15.14■□□□□ 0.01
SCAF1-203ENST00000598359 ADAM7Q9H2U9 754 aa15.14■□□□□ 0.01
SCAF1-203ENST00000598359 KMT5AQ9NQR1 393 aa15.14■□□□□ 0.01
SCAF1-203ENST00000598359 NR1I2O75469 434 aa15.13■□□□□ 0.01
SCAF1-203ENST00000598359 PLA2G4BP0C869 781 aa15.13■□□□□ 0.01
SCAF1-203ENST00000598359 IGFBP6P24592 240 aaPredicted RBP15.13■□□□□ 0.01
SCAF1-203ENST00000598359 GLUD2P49448 558 aa15.13■□□□□ 0.01
SCAF1-203ENST00000598359 DHX8Q14562 1220 aaKnown RBP15.13■□□□□ 0.01
SCAF1-203ENST00000598359 TMEM119Q4V9L6 283 aa15.13■□□□□ 0.01
SCAF1-203ENST00000598359 HERC4Q5GLZ8 1057 aaPredicted RBP15.13■□□□□ 0.01
SCAF1-203ENST00000598359 GLRA4Q5JXX5 417 aa15.13■□□□□ 0.01
SCAF1-203ENST00000598359 KIAA0319Q5VV43 1072 aa15.13■□□□□ 0.01
SCAF1-203ENST00000598359 ARL6IP4Q66PJ3 421 aaKnown RBP15.13■□□□□ 0.01
SCAF1-203ENST00000598359 CES5AQ6NT32 575 aa15.13■□□□□ 0.01
SCAF1-203ENST00000598359 FUT10Q6P4F1 479 aa15.13■□□□□ 0.01
SCAF1-203ENST00000598359 FAM173BQ6P4H8 233 aa15.13■□□□□ 0.01
SCAF1-203ENST00000598359 ZBTB33Q86T24 672 aa15.13■□□□□ 0.01
SCAF1-203ENST00000598359 GLYCTKQ8IVS8 523 aa15.13■□□□□ 0.01
SCAF1-203ENST00000598359 RNF168Q8IYW5 571 aaPredicted RBP15.13■□□□□ 0.01
SCAF1-203ENST00000598359 CDK5RAP3Q96JB5 506 aa15.13■□□□□ 0.01
SCAF1-203ENST00000598359 DRC1Q96MC2 740 aa15.13■□□□□ 0.01
SCAF1-203ENST00000598359 PHOX2BQ99453 314 aa15.13■□□□□ 0.01
SCAF1-203ENST00000598359 TARS2Q9BW92 718 aaKnown RBP15.13■□□□□ 0.01
SCAF1-203ENST00000598359 DZANK1Q9NVP4 752 aa15.13■□□□□ 0.01
SCAF1-203ENST00000598359 ADAM28Q9UKQ2 775 aa15.13■□□□□ 0.01
SCAF1-203ENST00000598359 SPDYE4A6NLX3 237 aa15.12■□□□□ 0.01
SCAF1-203ENST00000598359 TEX28O15482 410 aa15.12■□□□□ 0.01
SCAF1-203ENST00000598359 TADA2AO75478 443 aa15.12■□□□□ 0.01
SCAF1-203ENST00000598359 KIF4AO95239 1232 aa15.12■□□□□ 0.01
SCAF1-203ENST00000598359 SPATA31D3P0C874 917 aa15.12■□□□□ 0.01
SCAF1-203ENST00000598359 RPL17P18621 184 aaKnown RBP15.12■□□□□ 0.01
SCAF1-203ENST00000598359 SLC12A3P55017 1021 aa15.12■□□□□ 0.01
SCAF1-203ENST00000598359 OSTNP61366 133 aa15.12■□□□□ 0.01
SCAF1-203ENST00000598359 DMP1Q13316 513 aaPredicted RBP15.12■□□□□ 0.01
SCAF1-203ENST00000598359 TUSC3Q13454 348 aa15.12■□□□□ 0.01
SCAF1-203ENST00000598359 HSP90AA2PQ14568 343 aaPredicted RBP15.12■□□□□ 0.01
SCAF1-203ENST00000598359 SF3A1Q15459 793 aaKnown RBP15.12■□□□□ 0.01
SCAF1-203ENST00000598359 NAB2Q15742 525 aa15.12■□□□□ 0.01
SCAF1-203ENST00000598359 DCAF4L1Q3SXM0 396 aa15.12■□□□□ 0.01
SCAF1-203ENST00000598359 ARSHQ5FYA8 562 aa15.12■□□□□ 0.01
SCAF1-203ENST00000598359 KIAA1841Q6NSI8 718 aa15.12■□□□□ 0.01
SCAF1-203ENST00000598359 SPATA31D4Q6ZUB0 917 aa15.12■□□□□ 0.01
SCAF1-203ENST00000598359 BRAPQ7Z569 592 aa15.12■□□□□ 0.01
SCAF1-203ENST00000598359 SYT2Q8N9I0 419 aaPredicted RBP15.12■□□□□ 0.01
SCAF1-203ENST00000598359 ACO2Q99798 780 aaKnown RBP15.12■□□□□ 0.01
SCAF1-203ENST00000598359 CDT1Q9H211 546 aa15.12■□□□□ 0.01
SCAF1-203ENST00000598359 ARHGAP28Q9P2N2 729 aa15.12■□□□□ 0.01
SCAF1-203ENST00000598359 CLIC4Q9Y696 253 aa15.12■□□□□ 0.01
SCAF1-203ENST00000598359 PHLPP2Q6ZVD8 1323 aa15.12■□□□□ 0.01
SCAF1-203ENST00000598359 ZMYM2Q9UBW7 1377 aa15.11■□□□□ 0.01
SCAF1-203ENST00000598359 SPTBN4Q9H254 2564 aa15.11■□□□□ 0.01
SCAF1-203ENST00000598359 C2CD4DB7Z1M9 353 aa15.11■□□□□ 0.01
SCAF1-203ENST00000598359 THP07101 528 aa15.11■□□□□ 0.01
SCAF1-203ENST00000598359 HARSP12081 509 aaKnown RBP15.11■□□□□ 0.01
SCAF1-203ENST00000598359 GUCY2CP25092 1073 aa15.11■□□□□ 0.01
SCAF1-203ENST00000598359 DSG1Q02413 1049 aa15.11■□□□□ 0.01
SCAF1-203ENST00000598359 ITIH3Q06033 890 aa15.11■□□□□ 0.01
SCAF1-203ENST00000598359 KARSQ15046 597 aaKnown RBP15.11■□□□□ 0.01
SCAF1-203ENST00000598359 ZNF568Q3ZCX4 644 aa15.11■□□□□ 0.01
SCAF1-203ENST00000598359 PRSS55Q6UWB4 352 aaPredicted RBP15.11■□□□□ 0.01
SCAF1-203ENST00000598359 HFE2Q6ZVN8 426 aa15.11■□□□□ 0.01
SCAF1-203ENST00000598359 PPFIBP1Q86W92 1011 aa15.11■□□□□ 0.01
SCAF1-203ENST00000598359 PALB2Q86YC2 1186 aa15.11■□□□□ 0.01
SCAF1-203ENST00000598359 RIN2Q8WYP3 895 aaPredicted RBP15.11■□□□□ 0.01
SCAF1-203ENST00000598359 ZBTB45Q96K62 511 aaPredicted RBP15.11■□□□□ 0.01
SCAF1-203ENST00000598359 NT5C3AQ9H0P0 336 aa15.11■□□□□ 0.01
SCAF1-203ENST00000598359 GOLGA2P5Q9HBQ8 144 aa15.11■□□□□ 0.01
SCAF1-203ENST00000598359 MAN1C1Q9NR34 630 aa15.11■□□□□ 0.01
SCAF1-203ENST00000598359 CHST7Q9NS84 486 aa15.11■□□□□ 0.01
SCAF1-203ENST00000598359 STK39Q9UEW8 545 aa15.11■□□□□ 0.01
SCAF1-203ENST00000598359 TNFSF13BQ9Y275 285 aa15.11■□□□□ 0.01
SCAF1-203ENST00000598359 PLXNA3P51805 1871 aa15.1■□□□□ 0.01
SCAF1-203ENST00000598359 TECTAO75443 2155 aa15.1■□□□□ 0.01
SCAF1-203ENST00000598359 PLS3P13797 630 aa15.1■□□□□ 0.01
SCAF1-203ENST00000598359 SYT1P21579 422 aa15.1■□□□□ 0.01
SCAF1-203ENST00000598359 UBA7P41226 1012 aa15.1■□□□□ 0.01
SCAF1-203ENST00000598359 MTHFRP42898 656 aa15.1■□□□□ 0.01
SCAF1-203ENST00000598359 RESTQ13127 1097 aa15.1■□□□□ 0.01
SCAF1-203ENST00000598359 SEZ6Q53EL9 994 aa15.1■□□□□ 0.01
SCAF1-203ENST00000598359 SPECC1Q5M775 1068 aa15.1■□□□□ 0.01
SCAF1-203ENST00000598359 RTP2Q5QGT7 225 aa15.1■□□□□ 0.01
SCAF1-203ENST00000598359 HSCBQ8IWL3 235 aa15.1■□□□□ 0.01
SCAF1-203ENST00000598359 EDAQ92838 391 aa15.1■□□□□ 0.01
SCAF1-203ENST00000598359 RIPOR3Q96MK2 946 aa15.1■□□□□ 0.01
Retrieved 100 of 20,778 RNA–protein pairs in 23.3 ms