RNA–Protein interactions for RNA: ENST00000598309.1

USHBP1-208, Transcript of USH1 protein network component harmonin binding protein 1, humanhuman

TSL 4

Gene USHBP1, Length 549 nt, Biotype protein coding, Subcellular localisation Cytoplasm, Cytosol, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
USHBP1-208ENST00000598309 PTGESO14684 152 aa18.29■□□□□ 0.52
USHBP1-208ENST00000598309 CLASP2O75122 1294 aaKnown RBP18.29■□□□□ 0.52
USHBP1-208ENST00000598309 SOD2P04179 222 aa18.29■□□□□ 0.52
USHBP1-208ENST00000598309 MCF2P10911 925 aa18.29■□□□□ 0.52
USHBP1-208ENST00000598309 PROZP22891 400 aa18.29■□□□□ 0.52
USHBP1-208ENST00000598309 DDIT3P35638 169 aa18.29■□□□□ 0.52
USHBP1-208ENST00000598309 GRM5P41594 1212 aa18.29■□□□□ 0.52
USHBP1-208ENST00000598309 NCKAP1LP55160 1127 aa18.29■□□□□ 0.52
USHBP1-208ENST00000598309 TUSC3Q13454 348 aa18.29■□□□□ 0.52
USHBP1-208ENST00000598309 MCM6Q14566 821 aa18.29■□□□□ 0.52
USHBP1-208ENST00000598309 ZNF568Q3ZCX4 644 aa18.29■□□□□ 0.52
USHBP1-208ENST00000598309 SPECC1Q5M775 1068 aa18.29■□□□□ 0.52
USHBP1-208ENST00000598309 USP49Q70CQ1 688 aa18.29■□□□□ 0.52
USHBP1-208ENST00000598309 CASP10Q92851 521 aa18.29■□□□□ 0.52
USHBP1-208ENST00000598309 CLIC6Q96NY7 704 aa18.29■□□□□ 0.52
USHBP1-208ENST00000598309 TARS2Q9BW92 718 aaKnown RBP18.29■□□□□ 0.52
USHBP1-208ENST00000598309 PARVGQ9HBI0 331 aa18.29■□□□□ 0.52
USHBP1-208ENST00000598309 TDRD15B5MCY1 1934 aaKnown RBP18.28■□□□□ 0.52
USHBP1-208ENST00000598309 ABLIM1O14639 778 aa18.28■□□□□ 0.52
USHBP1-208ENST00000598309 TOM1L1O75674 476 aa18.28■□□□□ 0.52
USHBP1-208ENST00000598309 FAM13AO94988 1023 aa18.28■□□□□ 0.52
USHBP1-208ENST00000598309 KRT18P05783 430 aaKnown RBP18.28■□□□□ 0.52
USHBP1-208ENST00000598309 THP07101 528 aa18.28■□□□□ 0.52
USHBP1-208ENST00000598309 HOXB8P17481 243 aaPredicted RBP18.28■□□□□ 0.52
USHBP1-208ENST00000598309 CA8P35219 290 aa18.28■□□□□ 0.52
USHBP1-208ENST00000598309 RBM10P98175 930 aaKnown RBP18.28■□□□□ 0.52
USHBP1-208ENST00000598309 CACNB1Q02641 598 aaPredicted RBP18.28■□□□□ 0.52
USHBP1-208ENST00000598309 DHX8Q14562 1220 aaKnown RBP18.28■□□□□ 0.52
USHBP1-208ENST00000598309 STK38Q15208 465 aa18.28■□□□□ 0.52
USHBP1-208ENST00000598309 ANKRD54Q6NXT1 300 aa18.28■□□□□ 0.52
USHBP1-208ENST00000598309 MPZL3Q6UWV2 235 aa18.28■□□□□ 0.52
USHBP1-208ENST00000598309 ZPBP2Q6X784 338 aa18.28■□□□□ 0.52
USHBP1-208ENST00000598309 ADHFE1Q8IWW8 467 aa18.28■□□□□ 0.52
USHBP1-208ENST00000598309 LINC00301Q8NCQ3 95 aa18.28■□□□□ 0.52
USHBP1-208ENST00000598309 AUTS2Q8WXX7 1259 aa18.28■□□□□ 0.52
USHBP1-208ENST00000598309 CCDC94Q9BW85 323 aaPredicted RBP18.28■□□□□ 0.52
USHBP1-208ENST00000598309 TOPORSQ9NS56 1045 aaPredicted RBP18.28■□□□□ 0.52
USHBP1-208ENST00000598309 SSX2IPQ9Y2D8 614 aa18.28■□□□□ 0.52
USHBP1-208ENST00000598309 GDAQ9Y2T3 454 aa18.28■□□□□ 0.52
USHBP1-208ENST00000598309 HCFC2Q9Y5Z7 792 aa18.28■□□□□ 0.52
USHBP1-208ENST00000598309 PPP6R2O75170 966 aa18.27■□□□□ 0.52
USHBP1-208ENST00000598309 TBCAO75347 108 aaKnown RBP18.27■□□□□ 0.52
USHBP1-208ENST00000598309 YEATS4O95619 227 aa18.27■□□□□ 0.52
USHBP1-208ENST00000598309 URODP06132 367 aa18.27■□□□□ 0.52
USHBP1-208ENST00000598309 ZSCAN22P10073 491 aaPredicted RBP18.27■□□□□ 0.52
USHBP1-208ENST00000598309 ABCD1P33897 745 aa18.27■□□□□ 0.52
USHBP1-208ENST00000598309 ZP2Q05996 745 aa18.27■□□□□ 0.52
USHBP1-208ENST00000598309 HSP90AA2PQ14568 343 aaPredicted RBP18.27■□□□□ 0.52
USHBP1-208ENST00000598309 CCDC73Q6ZRK6 1079 aa18.27■□□□□ 0.52
USHBP1-208ENST00000598309 PPFIBP1Q86W92 1011 aa18.27■□□□□ 0.52
USHBP1-208ENST00000598309 GPR65Q8IYL9 337 aa18.27■□□□□ 0.52
USHBP1-208ENST00000598309 GJD3Q8N144 294 aa18.27■□□□□ 0.52
USHBP1-208ENST00000598309 TMEM87AQ8NBN3 555 aa18.27■□□□□ 0.52
USHBP1-208ENST00000598309 POP1Q99575 1024 aaKnown RBP18.27■□□□□ 0.52
USHBP1-208ENST00000598309 EMILIN2Q9BXX0 1053 aa18.27■□□□□ 0.52
USHBP1-208ENST00000598309 MRPL17Q9NRX2 175 aaKnown RBP18.27■□□□□ 0.52
USHBP1-208ENST00000598309 MUC3AQ02505 3323 aa18.26■□□□□ 0.51
USHBP1-208ENST00000598309 SPTLC2O15270 562 aa18.26■□□□□ 0.51
USHBP1-208ENST00000598309 LILRB3O75022 631 aa18.26■□□□□ 0.51
USHBP1-208ENST00000598309 F13A1P00488 732 aa18.26■□□□□ 0.51
USHBP1-208ENST00000598309 GLUD2P49448 558 aa18.26■□□□□ 0.51
USHBP1-208ENST00000598309 YARSP54577 528 aaKnown RBP18.26■□□□□ 0.51
USHBP1-208ENST00000598309 NOLC1Q14978 699 aaKnown RBP eCLIP18.26■□□□□ 0.51
USHBP1-208ENST00000598309 NAB2Q15742 525 aa18.26■□□□□ 0.51
USHBP1-208ENST00000598309 RRAGBQ5VZM2 374 aa18.26■□□□□ 0.51
USHBP1-208ENST00000598309 LLGL2Q6P1M3 1020 aa18.26■□□□□ 0.51
USHBP1-208ENST00000598309 FUT10Q6P4F1 479 aa18.26■□□□□ 0.51
USHBP1-208ENST00000598309 HAUS6Q7Z4H7 955 aa18.26■□□□□ 0.51
USHBP1-208ENST00000598309 MYCT1Q8N699 235 aa18.26■□□□□ 0.51
USHBP1-208ENST00000598309 SUSD6Q92537 303 aa18.26■□□□□ 0.51
USHBP1-208ENST00000598309 TCHPQ9BT92 498 aa18.26■□□□□ 0.51
USHBP1-208ENST00000598309 DZANK1Q9NVP4 752 aa18.26■□□□□ 0.51
USHBP1-208ENST00000598309 ADAM28Q9UKQ2 775 aa18.26■□□□□ 0.51
USHBP1-208ENST00000598309 USP15Q9Y4E8 981 aaPredicted RBP18.26■□□□□ 0.51
USHBP1-208ENST00000598309 MYH11P35749 1972 aa18.25■□□□□ 0.51
USHBP1-208ENST00000598309 C19orf67A6NJJ6 358 aa18.25■□□□□ 0.51
USHBP1-208ENST00000598309 F8W810 466 aa18.25■□□□□ 0.51
USHBP1-208ENST00000598309 K7ENM7 598 aa18.25■□□□□ 0.51
USHBP1-208ENST00000598309 TRAK2O60296 914 aa18.25■□□□□ 0.51
USHBP1-208ENST00000598309 DSG1Q02413 1049 aa18.25■□□□□ 0.51
USHBP1-208ENST00000598309 TPRNQ4KMQ1 711 aa18.25■□□□□ 0.51
USHBP1-208ENST00000598309 XKR4Q5GH76 650 aa18.25■□□□□ 0.51
USHBP1-208ENST00000598309 SYCE2Q6PIF2 218 aa18.25■□□□□ 0.51
USHBP1-208ENST00000598309 ZBTB33Q86T24 672 aa18.25■□□□□ 0.51
USHBP1-208ENST00000598309 CEP120Q8N960 986 aa18.25■□□□□ 0.51
USHBP1-208ENST00000598309 SLC22A17Q8WUG5 538 aa18.25■□□□□ 0.51
USHBP1-208ENST00000598309 PPP1R10Q96QC0 940 aaKnown RBP18.25■□□□□ 0.51
USHBP1-208ENST00000598309 CD320Q9NPF0 282 aa18.25■□□□□ 0.51
USHBP1-208ENST00000598309 CHST7Q9NS84 486 aa18.25■□□□□ 0.51
USHBP1-208ENST00000598309 MYH15Q9Y2K3 1946 aa18.25■□□□□ 0.51
USHBP1-208ENST00000598309 SF3B1O75533 1304 aaKnown RBP eCLIP18.24■□□□□ 0.51
USHBP1-208ENST00000598309 BDP1A6H8Y1 2624 aa18.24■□□□□ 0.51
USHBP1-208ENST00000598309 CASTOR2A6NHX0 329 aa18.24■□□□□ 0.51
USHBP1-208ENST00000598309 PIGRP01833 764 aa18.24■□□□□ 0.51
USHBP1-208ENST00000598309 CNPP09543 421 aaKnown RBP18.24■□□□□ 0.51
USHBP1-208ENST00000598309 SSTR3P32745 418 aaPredicted RBP18.24■□□□□ 0.51
USHBP1-208ENST00000598309 MCL1Q07820 350 aa18.24■□□□□ 0.51
USHBP1-208ENST00000598309 USP41Q3LFD5 358 aa18.24■□□□□ 0.51
USHBP1-208ENST00000598309 KIAA0319Q5VV43 1072 aa18.24■□□□□ 0.51
USHBP1-208ENST00000598309 ATL3Q6DD88 541 aa18.24■□□□□ 0.51
Retrieved 100 of 20,778 RNA–protein pairs in 34.8 ms