RNA–Protein interactions for RNA: ENST00000597901.1

LIG1-215, Transcript of DNA ligase 1, humanhuman

TSL 4

Gene LIG1, Length 565 nt, Biotype retained intron, Subcellular localisation Cytosol .

Download Table  
RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
LIG1-215ENST00000597901 PDCP20941 246 aa16.58■□□□□ 0.24
LIG1-215ENST00000597901 UBA7P41226 1012 aa16.58■□□□□ 0.24
LIG1-215ENST00000597901 CLCN4P51793 760 aa16.58■□□□□ 0.24
LIG1-215ENST00000597901 SLC12A3P55017 1021 aa16.58■□□□□ 0.24
LIG1-215ENST00000597901 RAD51AP2Q09MP3 1159 aa16.58■□□□□ 0.24
LIG1-215ENST00000597901 DMP1Q13316 513 aaPredicted RBP16.58■□□□□ 0.24
LIG1-215ENST00000597901 TUSC3Q13454 348 aa16.58■□□□□ 0.24
LIG1-215ENST00000597901 SF3A1Q15459 793 aaKnown RBP16.58■□□□□ 0.24
LIG1-215ENST00000597901 DCAF4L1Q3SXM0 396 aa16.58■□□□□ 0.24
LIG1-215ENST00000597901 ATAT1Q5SQI0 421 aa16.58■□□□□ 0.24
LIG1-215ENST00000597901 RARS2Q5T160 578 aaKnown RBP16.58■□□□□ 0.24
LIG1-215ENST00000597901 KIAA1841Q6NSI8 718 aa16.58■□□□□ 0.24
LIG1-215ENST00000597901 ACO2Q99798 780 aaKnown RBP16.58■□□□□ 0.24
LIG1-215ENST00000597901 PAAF1Q9BRP4 392 aa16.58■□□□□ 0.24
LIG1-215ENST00000597901 RXFP1Q9HBX9 757 aa16.58■□□□□ 0.24
LIG1-215ENST00000597901 PTPRHQ9HD43 1115 aa16.58■□□□□ 0.24
LIG1-215ENST00000597901 DZANK1Q9NVP4 752 aa16.58■□□□□ 0.24
LIG1-215ENST00000597901 GDAQ9Y2T3 454 aa16.58■□□□□ 0.24
LIG1-215ENST00000597901 VPS37CA5D8V6 355 aaPredicted RBP16.57■□□□□ 0.24
LIG1-215ENST00000597901 SLC16A4O15374 487 aa16.57■□□□□ 0.24
LIG1-215ENST00000597901 SLC26A4O43511 780 aa16.57■□□□□ 0.24
LIG1-215ENST00000597901 BMP15O95972 392 aa16.57■□□□□ 0.24
LIG1-215ENST00000597901 WEE2P0C1S8 567 aa16.57■□□□□ 0.24
LIG1-215ENST00000597901 GLUD2P49448 558 aa16.57■□□□□ 0.24
LIG1-215ENST00000597901 DSG1Q02413 1049 aa16.57■□□□□ 0.24
LIG1-215ENST00000597901 NAB2Q15742 525 aa16.57■□□□□ 0.24
LIG1-215ENST00000597901 USP41Q3LFD5 358 aa16.57■□□□□ 0.24
LIG1-215ENST00000597901 TMEM119Q4V9L6 283 aa16.57■□□□□ 0.24
LIG1-215ENST00000597901 ARSHQ5FYA8 562 aa16.57■□□□□ 0.24
LIG1-215ENST00000597901 TAS1R3Q7RTX0 852 aa16.57■□□□□ 0.24
LIG1-215ENST00000597901 APBB1IPQ7Z5R6 666 aaPredicted RBP16.57■□□□□ 0.24
LIG1-215ENST00000597901 SPIRE2Q8WWL2 714 aa16.57■□□□□ 0.24
LIG1-215ENST00000597901 FBXL18Q96ME1 805 aa16.57■□□□□ 0.24
LIG1-215ENST00000597901 NECTIN4Q96NY8 510 aa16.57■□□□□ 0.24
LIG1-215ENST00000597901 TARS2Q9BW92 718 aaKnown RBP16.57■□□□□ 0.24
LIG1-215ENST00000597901 MRPL4Q9BYD3 311 aaKnown RBP16.57■□□□□ 0.24
LIG1-215ENST00000597901 ARHGAP28Q9P2N2 729 aa16.57■□□□□ 0.24
LIG1-215ENST00000597901 CACNG4Q9UBN1 327 aa16.57■□□□□ 0.24
LIG1-215ENST00000597901 ADAM28Q9UKQ2 775 aa16.57■□□□□ 0.24
LIG1-215ENST00000597901 NPHP3-ACAD11A0A0J9YXS1 232 aa16.56■□□□□ 0.24
LIG1-215ENST00000597901 TEX28O15482 410 aa16.56■□□□□ 0.24
LIG1-215ENST00000597901 PLS3P13797 630 aa16.56■□□□□ 0.24
LIG1-215ENST00000597901 SYT1P21579 422 aa16.56■□□□□ 0.24
LIG1-215ENST00000597901 MTHFRP42898 656 aa16.56■□□□□ 0.24
LIG1-215ENST00000597901 GRIN1Q05586 938 aa16.56■□□□□ 0.24
LIG1-215ENST00000597901 HSP90AA2PQ14568 343 aaPredicted RBP16.56■□□□□ 0.24
LIG1-215ENST00000597901 FUT10Q6P4F1 479 aa16.56■□□□□ 0.24
LIG1-215ENST00000597901 EDAQ92838 391 aa16.56■□□□□ 0.24
LIG1-215ENST00000597901 CALML4Q96GE6 196 aa16.56■□□□□ 0.24
LIG1-215ENST00000597901 INTS4Q96HW7 963 aaKnown RBP16.56■□□□□ 0.24
LIG1-215ENST00000597901 B3GALT6Q96L58 329 aa16.56■□□□□ 0.24
LIG1-215ENST00000597901 RIPOR3Q96MK2 946 aa16.56■□□□□ 0.24
LIG1-215ENST00000597901 TCHPQ9BT92 498 aa16.56■□□□□ 0.24
LIG1-215ENST00000597901 POMKQ9H5K3 350 aa16.56■□□□□ 0.24
LIG1-215ENST00000597901 KCND2Q9NZV8 630 aa16.56■□□□□ 0.24
LIG1-215ENST00000597901 PHLPP2Q6ZVD8 1323 aa16.55■□□□□ 0.24
LIG1-215ENST00000597901 CASTOR2A6NHX0 329 aa16.55■□□□□ 0.24
LIG1-215ENST00000597901 ADH1AP07327 375 aa16.55■□□□□ 0.24
LIG1-215ENST00000597901 LONP1P36776 959 aaKnown RBP16.55■□□□□ 0.24
LIG1-215ENST00000597901 SMTNP53814 917 aa16.55■□□□□ 0.24
LIG1-215ENST00000597901 TMC5Q6UXY8 1006 aa16.55■□□□□ 0.24
LIG1-215ENST00000597901 GPR149Q86SP6 731 aa16.55■□□□□ 0.24
LIG1-215ENST00000597901 ZBTB33Q86T24 672 aa16.55■□□□□ 0.24
LIG1-215ENST00000597901 GPR65Q8IYL9 337 aa16.55■□□□□ 0.24
LIG1-215ENST00000597901 CLIC4Q9Y696 253 aa16.55■□□□□ 0.24
LIG1-215ENST00000597901 PROZP22891 400 aa16.54■□□□□ 0.24
LIG1-215ENST00000597901 GRM5P41594 1212 aa16.54■□□□□ 0.24
LIG1-215ENST00000597901 DHX8Q14562 1220 aaKnown RBP16.54■□□□□ 0.24
LIG1-215ENST00000597901 ALKAL1Q6UXT8 129 aa16.54■□□□□ 0.24
LIG1-215ENST00000597901 PALB2Q86YC2 1186 aa16.54■□□□□ 0.24
LIG1-215ENST00000597901 CEP120Q8N960 986 aa16.54■□□□□ 0.24
LIG1-215ENST00000597901 TMEM161BQ8NDZ6 487 aa16.54■□□□□ 0.24
LIG1-215ENST00000597901 FEZF2Q8TBJ5 459 aa16.54■□□□□ 0.24
LIG1-215ENST00000597901 LRRC15Q8TF66 581 aa16.54■□□□□ 0.24
LIG1-215ENST00000597901 RIN2Q8WYP3 895 aaPredicted RBP16.54■□□□□ 0.24
LIG1-215ENST00000597901 ZBTB45Q96K62 511 aaPredicted RBP16.54■□□□□ 0.24
LIG1-215ENST00000597901 CDT1Q9H211 546 aa16.54■□□□□ 0.24
LIG1-215ENST00000597901 APOBEC3CQ9NRW3 190 aaKnown RBP eCLIP16.54■□□□□ 0.24
LIG1-215ENST00000597901 FOXD4L1Q9NU39 408 aa16.54■□□□□ 0.24
LIG1-215ENST00000597901 BLOC1S4Q9NUP1 217 aa16.54■□□□□ 0.24
LIG1-215ENST00000597901 NR2E1Q9Y466 385 aa16.54■□□□□ 0.24
LIG1-215ENST00000597901 SMIM28A0A1B0GU29 152 aa16.53■□□□□ 0.24
LIG1-215ENST00000597901 ABLIM1O14639 778 aa16.53■□□□□ 0.24
LIG1-215ENST00000597901 C1RP00736 705 aa16.53■□□□□ 0.24
LIG1-215ENST00000597901 SPATA31D3P0C874 917 aa16.53■□□□□ 0.24
LIG1-215ENST00000597901 MCF2P10911 925 aa16.53■□□□□ 0.24
LIG1-215ENST00000597901 SP100P23497 879 aaPredicted RBP16.53■□□□□ 0.24
LIG1-215ENST00000597901 DDIT3P35638 169 aa16.53■□□□□ 0.24
LIG1-215ENST00000597901 YARSP54577 528 aaKnown RBP16.53■□□□□ 0.24
LIG1-215ENST00000597901 OSTNP61366 133 aa16.53■□□□□ 0.24
LIG1-215ENST00000597901 ZXDAP98168 799 aa16.53■□□□□ 0.24
LIG1-215ENST00000597901 CACNB1Q02641 598 aaPredicted RBP16.53■□□□□ 0.24
LIG1-215ENST00000597901 STRN3Q13033 797 aa16.53■□□□□ 0.24
LIG1-215ENST00000597901 RESTQ13127 1097 aa16.53■□□□□ 0.24
LIG1-215ENST00000597901 KARSQ15046 597 aaKnown RBP16.53■□□□□ 0.24
LIG1-215ENST00000597901 PTPAQ15257 358 aa16.53■□□□□ 0.24
LIG1-215ENST00000597901 ZNF568Q3ZCX4 644 aa16.53■□□□□ 0.24
LIG1-215ENST00000597901 XKR4Q5GH76 650 aa16.53■□□□□ 0.24
LIG1-215ENST00000597901 FAM171A1Q5VUB5 890 aa16.53■□□□□ 0.24
LIG1-215ENST00000597901 FAM173BQ6P4H8 233 aa16.53■□□□□ 0.24
Retrieved 100 of 20,778 RNA–protein pairs in 33.8 ms