RNA–Protein interactions for RNA: ENST00000596802.5

SIN3B-209, Transcript of SIN3 transcription regulator family member B, humanhuman

TSL 1 (best) BASIC

Gene SIN3B, Length 2,556 nt, Biotype protein coding, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SIN3B-209ENST00000596802 C12orf50Q8NA57 414 aaPredicted RBP24.42■■□□□ 1.5
SIN3B-209ENST00000596802 GPR88Q9GZN0 384 aa24.42■■□□□ 1.5
SIN3B-209ENST00000596802 MKNK2Q9HBH9 465 aa24.42■■□□□ 1.5
SIN3B-209ENST00000596802 SAR1AQ9NR31 198 aa24.42■■□□□ 1.5
SIN3B-209ENST00000596802 NIP7Q9Y221 180 aaKnown RBP eCLIP24.42■■□□□ 1.5
SIN3B-209ENST00000596802 TOGARAM1Q9Y4F4 1720 aa24.41■■□□□ 1.5
SIN3B-209ENST00000596802 ERVV-1B6SEH8 477 aa24.41■■□□□ 1.5
SIN3B-209ENST00000596802 PSMG1O95456 288 aa24.41■■□□□ 1.5
SIN3B-209ENST00000596802 PENKP01210 267 aaPredicted RBP24.41■■□□□ 1.5
SIN3B-209ENST00000596802 TNFAIP3P21580 790 aa24.41■■□□□ 1.5
SIN3B-209ENST00000596802 MUTP22033 750 aa24.41■■□□□ 1.5
SIN3B-209ENST00000596802 MAGEA8P43361 318 aa24.41■■□□□ 1.5
SIN3B-209ENST00000596802 SLC45A4Q5BKX6 768 aa24.41■■□□□ 1.5
SIN3B-209ENST00000596802 USP17L2Q6R6M4 530 aa24.41■■□□□ 1.5
SIN3B-209ENST00000596802 SYCP3Q8IZU3 236 aa24.41■■□□□ 1.5
SIN3B-209ENST00000596802 DNAJC18Q9H819 358 aa24.41■■□□□ 1.5
SIN3B-209ENST00000596802 KRT82Q9NSB4 513 aa24.41■■□□□ 1.5
SIN3B-209ENST00000596802 GRID1Q9ULK0 1009 aa24.41■■□□□ 1.5
SIN3B-209ENST00000596802 KDM3AQ9Y4C1 1321 aa24.41■■□□□ 1.5
SIN3B-209ENST00000596802 SPAG7O75391 227 aa24.41■■□□□ 1.5
SIN3B-209ENST00000596802 LYNP07948 512 aa24.41■■□□□ 1.5
SIN3B-209ENST00000596802 COMTP21964 271 aa24.41■■□□□ 1.5
SIN3B-209ENST00000596802 WDR72Q3MJ13 1102 aa24.41■■□□□ 1.5
SIN3B-209ENST00000596802 PPFIBP2Q8ND30 876 aa24.41■■□□□ 1.5
SIN3B-209ENST00000596802 DTX3LQ8TDB6 740 aa24.41■■□□□ 1.5
SIN3B-209ENST00000596802 DENND1AQ8TEH3 1009 aa24.41■■□□□ 1.5
SIN3B-209ENST00000596802 ZNF184Q99676 751 aaPredicted RBP24.41■■□□□ 1.5
SIN3B-209ENST00000596802 PREBQ9HCU5 417 aa24.41■■□□□ 1.5
SIN3B-209ENST00000596802 CCDC87Q9NVE4 849 aa24.41■■□□□ 1.5
SIN3B-209ENST00000596802 DNAJC12Q9UKB3 198 aa24.41■■□□□ 1.5
SIN3B-209ENST00000596802 POTEB3A0JP26 581 aa24.4■■□□□ 1.5
SIN3B-209ENST00000596802 POTECB2RU33 542 aa24.4■■□□□ 1.5
SIN3B-209ENST00000596802 KRT18P05783 430 aaKnown RBP24.4■■□□□ 1.5
SIN3B-209ENST00000596802 FAM163BP0C2L3 166 aa24.4■■□□□ 1.5
SIN3B-209ENST00000596802 RBM26Q5T8P6 1007 aaKnown RBP24.4■■□□□ 1.5
SIN3B-209ENST00000596802 POTEBQ6S5H4 581 aa24.4■■□□□ 1.5
SIN3B-209ENST00000596802 NLRP9Q7RTR0 991 aa24.4■■□□□ 1.5
SIN3B-209ENST00000596802 CLNKQ7Z7G1 428 aa24.4■■□□□ 1.5
SIN3B-209ENST00000596802 STX18Q9P2W9 335 aaKnown RBP24.4■■□□□ 1.5
SIN3B-209ENST00000596802 ASIC3Q9UHC3 531 aa24.4■■□□□ 1.5
SIN3B-209ENST00000596802 HNRNPCL1O60812 293 aaKnown RBP24.4■■□□□ 1.5
SIN3B-209ENST00000596802 CYP19A1P11511 503 aaPredicted RBP24.4■■□□□ 1.5
SIN3B-209ENST00000596802 ITIH2P19823 946 aa24.4■■□□□ 1.5
SIN3B-209ENST00000596802 PRUNE1Q86TP1 453 aa24.4■■□□□ 1.5
SIN3B-209ENST00000596802 MAML1Q92585 1016 aa24.4■■□□□ 1.5
SIN3B-209ENST00000596802 PWWP2AQ96N64 755 aa24.4■■□□□ 1.5
SIN3B-209ENST00000596802 NR1H4Q96RI1 486 aaPredicted RBP24.4■■□□□ 1.5
SIN3B-209ENST00000596802 HAPLN3Q96S86 360 aa24.4■■□□□ 1.5
SIN3B-209ENST00000596802 LRRC19Q9H756 370 aa24.4■■□□□ 1.5
SIN3B-209ENST00000596802 XIRP1Q702N8 1843 aaKnown RBP24.39■■□□□ 1.5
SIN3B-209ENST00000596802 PDXKO00764 312 aa24.39■■□□□ 1.5
SIN3B-209ENST00000596802 MAP3K7O43318 606 aa24.39■■□□□ 1.5
SIN3B-209ENST00000596802 CALUO43852 315 aaPredicted RBP24.39■■□□□ 1.5
SIN3B-209ENST00000596802 NR3C1P04150 777 aa24.39■■□□□ 1.5
SIN3B-209ENST00000596802 ZCCHC18P0CG32 403 aa24.39■■□□□ 1.5
SIN3B-209ENST00000596802 IVDP26440 423 aa24.39■■□□□ 1.5
SIN3B-209ENST00000596802 DPY19L2Q6NUT2 758 aa24.39■■□□□ 1.5
SIN3B-209ENST00000596802 RNF207Q6ZRF8 634 aa24.39■■□□□ 1.5
SIN3B-209ENST00000596802 SLC44A5Q8NCS7 719 aa24.39■■□□□ 1.5
SIN3B-209ENST00000596802 PIGBQ92521 554 aa24.39■■□□□ 1.5
SIN3B-209ENST00000596802 MXD3Q9BW11 206 aa24.39■■□□□ 1.5
SIN3B-209ENST00000596802 CYLDQ9NQC7 956 aa24.39■■□□□ 1.5
SIN3B-209ENST00000596802 GALNT8Q9NY28 637 aa24.39■■□□□ 1.5
SIN3B-209ENST00000596802 TMCO1Q9UM00 188 aa24.39■■□□□ 1.5
SIN3B-209ENST00000596802 SCN7AQ01118 1682 aa24.39■■□□□ 1.49
SIN3B-209ENST00000596802 A0A1W2PRG0 241 aa24.39■■□□□ 1.49
SIN3B-209ENST00000596802 TMED2Q15363 201 aa24.39■■□□□ 1.49
SIN3B-209ENST00000596802 PDK4Q16654 411 aa24.39■■□□□ 1.49
SIN3B-209ENST00000596802 CAVIN4Q5BKX8 364 aa24.39■■□□□ 1.49
SIN3B-209ENST00000596802 MTDHQ86UE4 582 aaKnown RBP24.39■■□□□ 1.49
SIN3B-209ENST00000596802 LCA5Q86VQ0 697 aa24.39■■□□□ 1.49
SIN3B-209ENST00000596802 SLCO2A1Q92959 643 aa24.39■■□□□ 1.49
SIN3B-209ENST00000596802 FAM84BQ96KN1 310 aaPredicted RBP24.39■■□□□ 1.49
SIN3B-209ENST00000596802 FRMPD4Q14CM0 1322 aa24.39■■□□□ 1.49
SIN3B-209ENST00000596802 C10orf71Q711Q0 1435 aa24.38■■□□□ 1.49
SIN3B-209ENST00000596802 C2CD2LO14523 706 aa24.38■■□□□ 1.49
SIN3B-209ENST00000596802 SLC16A3O15427 465 aaKnown RBP24.38■■□□□ 1.49
SIN3B-209ENST00000596802 NEK3P51956 506 aa24.38■■□□□ 1.49
SIN3B-209ENST00000596802 ITGA8P53708 1063 aa24.38■■□□□ 1.49
SIN3B-209ENST00000596802 SPARCL1Q14515 664 aa24.38■■□□□ 1.49
SIN3B-209ENST00000596802 MESDQ14696 234 aa24.38■■□□□ 1.49
SIN3B-209ENST00000596802 CD101Q93033 1021 aa24.38■■□□□ 1.49
SIN3B-209ENST00000596802 DDX43Q9NXZ2 648 aaKnown RBP24.38■■□□□ 1.49
SIN3B-209ENST00000596802 DDX25Q9UHL0 483 aaKnown RBP24.38■■□□□ 1.49
SIN3B-209ENST00000596802 PCDHA12Q9UN75 941 aa24.38■■□□□ 1.49
SIN3B-209ENST00000596802 ASTN1O14525 1302 aa24.38■■□□□ 1.49
SIN3B-209ENST00000596802 SHANK3Q9BYB0 1731 aa24.38■■□□□ 1.49
SIN3B-209ENST00000596802 GSC2O15499 205 aa24.38■■□□□ 1.49
SIN3B-209ENST00000596802 CCDC22O60826 627 aa24.38■■□□□ 1.49
SIN3B-209ENST00000596802 PRDX5P30044 214 aa24.38■■□□□ 1.49
SIN3B-209ENST00000596802 TNNI2P48788 182 aa24.38■■□□□ 1.49
SIN3B-209ENST00000596802 LSAMPQ13449 338 aa24.38■■□□□ 1.49
SIN3B-209ENST00000596802 CPNE8Q86YQ8 564 aa24.38■■□□□ 1.49
SIN3B-209ENST00000596802 CNKSR2Q8WXI2 1034 aa24.38■■□□□ 1.49
SIN3B-209ENST00000596802 SNF8Q96H20 258 aa24.38■■□□□ 1.49
SIN3B-209ENST00000596802 BTBD10Q9BSF8 475 aa24.38■■□□□ 1.49
SIN3B-209ENST00000596802 SYNCQ9H7C4 482 aa24.38■■□□□ 1.49
SIN3B-209ENST00000596802 PCDHB13Q9Y5F0 798 aa24.38■■□□□ 1.49
SIN3B-209ENST00000596802 EXOC3O60645 756 aa24.37■■□□□ 1.49
SIN3B-209ENST00000596802 NT5C2P49902 561 aa24.37■■□□□ 1.49
Retrieved 100 of 20,778 RNA–protein pairs in 15.5 ms