RNA–Protein interactions for RNA: ENST00000596708.1

CHMP2A-202, Transcript of charged multivesicular body protein 2A, humanhuman

TSL 3

Gene CHMP2A, Length 687 nt, Biotype protein coding, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CHMP2A-202ENST00000596708 WNT16Q9UBV4 365 aa11.7□□□□□ -0.54
CHMP2A-202ENST00000596708 NOTCH4Q99466 2003 aa11.7□□□□□ -0.54
CHMP2A-202ENST00000596708 POTEMA6NI47 508 aa11.69□□□□□ -0.54
CHMP2A-202ENST00000596708 LIG1P18858 919 aa11.69□□□□□ -0.54
CHMP2A-202ENST00000596708 ANAPC15P60006 121 aa11.69□□□□□ -0.54
CHMP2A-202ENST00000596708 CREMQ03060 361 aa11.69□□□□□ -0.54
CHMP2A-202ENST00000596708 HSP90AA2PQ14568 343 aaPredicted RBP11.69□□□□□ -0.54
CHMP2A-202ENST00000596708 ANGPT1Q15389 498 aa11.69□□□□□ -0.54
CHMP2A-202ENST00000596708 PRSS55Q6UWB4 352 aaPredicted RBP11.69□□□□□ -0.54
CHMP2A-202ENST00000596708 GET4Q7L5D6 327 aaPredicted RBP11.69□□□□□ -0.54
CHMP2A-202ENST00000596708 ZBTB8OSQ8IWT0 167 aa11.69□□□□□ -0.54
CHMP2A-202ENST00000596708 GPR65Q8IYL9 337 aa11.69□□□□□ -0.54
CHMP2A-202ENST00000596708 HASPINQ8TF76 798 aa11.69□□□□□ -0.54
CHMP2A-202ENST00000596708 NXPE3Q969Y0 559 aa11.69□□□□□ -0.54
CHMP2A-202ENST00000596708 ZNF707Q96C28 371 aaPredicted RBP11.69□□□□□ -0.54
CHMP2A-202ENST00000596708 PRIMPOLQ96LW4 560 aa11.69□□□□□ -0.54
CHMP2A-202ENST00000596708 PRKD2Q9BZL6 878 aa11.69□□□□□ -0.54
CHMP2A-202ENST00000596708 PRMT7Q9NVM4 692 aaPredicted RBP11.69□□□□□ -0.54
CHMP2A-202ENST00000596708 ZDHHC7Q9NXF8 308 aa11.69□□□□□ -0.54
CHMP2A-202ENST00000596708 FAM120AQ9NZB2 1118 aaKnown RBP eCLIP11.69□□□□□ -0.54
CHMP2A-202ENST00000596708 CACNG4Q9UBN1 327 aa11.69□□□□□ -0.54
CHMP2A-202ENST00000596708 SF3B1O75533 1304 aaKnown RBP eCLIP11.68□□□□□ -0.54
CHMP2A-202ENST00000596708 KRBA1A5PL33 1030 aa11.68□□□□□ -0.54
CHMP2A-202ENST00000596708 CASTOR2A6NHX0 329 aa11.68□□□□□ -0.54
CHMP2A-202ENST00000596708 WNT7AO00755 349 aa11.68□□□□□ -0.54
CHMP2A-202ENST00000596708 ZMYND10O75800 440 aa11.68□□□□□ -0.54
CHMP2A-202ENST00000596708 LARGE1O95461 756 aa11.68□□□□□ -0.54
CHMP2A-202ENST00000596708 C1RP00736 705 aa11.68□□□□□ -0.54
CHMP2A-202ENST00000596708 THP07101 528 aa11.68□□□□□ -0.54
CHMP2A-202ENST00000596708 SRFP11831 508 aa11.68□□□□□ -0.54
CHMP2A-202ENST00000596708 LAMP2P13473 410 aa11.68□□□□□ -0.54
CHMP2A-202ENST00000596708 MCM7P33993 719 aa11.68□□□□□ -0.54
CHMP2A-202ENST00000596708 TUSC3Q13454 348 aa11.68□□□□□ -0.54
CHMP2A-202ENST00000596708 RTP2Q5QGT7 225 aa11.68□□□□□ -0.54
CHMP2A-202ENST00000596708 FAM171A1Q5VUB5 890 aa11.68□□□□□ -0.54
CHMP2A-202ENST00000596708 LILRA6Q6PI73 481 aa11.68□□□□□ -0.54
CHMP2A-202ENST00000596708 PPP4R3CPQ6ZMV5 832 aa11.68□□□□□ -0.54
CHMP2A-202ENST00000596708 CATSPER3Q86XQ3 398 aa11.68□□□□□ -0.54
CHMP2A-202ENST00000596708 ADSSL1Q8N142 457 aa11.68□□□□□ -0.54
CHMP2A-202ENST00000596708 NSUN7Q8NE18 718 aaKnown RBP11.68□□□□□ -0.54
CHMP2A-202ENST00000596708 MCPH1Q8NEM0 835 aa11.68□□□□□ -0.54
CHMP2A-202ENST00000596708 ST13P5Q8NFI4 369 aaPredicted RBP11.68□□□□□ -0.54
CHMP2A-202ENST00000596708 GPR152Q8TDT2 470 aa11.68□□□□□ -0.54
CHMP2A-202ENST00000596708 GTF3C6Q969F1 213 aa11.68□□□□□ -0.54
CHMP2A-202ENST00000596708 MTMR9Q96QG7 549 aa11.68□□□□□ -0.54
CHMP2A-202ENST00000596708 NACC1Q96RE7 527 aa11.68□□□□□ -0.54
CHMP2A-202ENST00000596708 PAAF1Q9BRP4 392 aa11.68□□□□□ -0.54
CHMP2A-202ENST00000596708 ADPGKQ9BRR6 497 aa11.68□□□□□ -0.54
CHMP2A-202ENST00000596708 TTPALQ9BTX7 342 aa11.68□□□□□ -0.54
CHMP2A-202ENST00000596708 C2orf40Q9H1Z8 148 aa11.68□□□□□ -0.54
CHMP2A-202ENST00000596708 TMEM60Q9H2L4 133 aa11.68□□□□□ -0.54
CHMP2A-202ENST00000596708 TUFT1Q9NNX1 390 aa11.68□□□□□ -0.54
CHMP2A-202ENST00000596708 SNTG2Q9NY99 539 aa11.68□□□□□ -0.54
CHMP2A-202ENST00000596708 N4BP3O15049 544 aa11.67□□□□□ -0.54
CHMP2A-202ENST00000596708 JAK2O60674 1132 aa11.67□□□□□ -0.54
CHMP2A-202ENST00000596708 MED24O75448 989 aa11.67□□□□□ -0.54
CHMP2A-202ENST00000596708 SPATA31C1P0DKV0 1188 aa11.67□□□□□ -0.54
CHMP2A-202ENST00000596708 FSHRP23945 695 aa11.67□□□□□ -0.54
CHMP2A-202ENST00000596708 PRPF4BQ13523 1007 aaKnown RBP11.67□□□□□ -0.54
CHMP2A-202ENST00000596708 SAFBQ15424 915 aaKnown RBP eCLIP11.67□□□□□ -0.54
CHMP2A-202ENST00000596708 PSMD5Q16401 504 aa11.67□□□□□ -0.54
CHMP2A-202ENST00000596708 MAPK6Q16659 721 aa11.67□□□□□ -0.54
CHMP2A-202ENST00000596708 SPECC1Q5M775 1068 aa11.67□□□□□ -0.54
CHMP2A-202ENST00000596708 PPM1LQ5SGD2 360 aa11.67□□□□□ -0.54
CHMP2A-202ENST00000596708 LIN9Q5TKA1 542 aa11.67□□□□□ -0.54
CHMP2A-202ENST00000596708 GRASPQ7Z6J2 395 aaPredicted RBP11.67□□□□□ -0.54
CHMP2A-202ENST00000596708 KCNG4Q8TDN1 519 aa11.67□□□□□ -0.54
CHMP2A-202ENST00000596708 FZD8Q9H461 694 aa11.67□□□□□ -0.54
CHMP2A-202ENST00000596708 TBC1D17Q9HA65 648 aa11.67□□□□□ -0.54
CHMP2A-202ENST00000596708 POLIQ9UNA4 740 aa11.67□□□□□ -0.54
CHMP2A-202ENST00000596708 MYO15AQ9UKN7 3530 aa11.67□□□□□ -0.54
CHMP2A-202ENST00000596708 ZMYM2Q9UBW7 1377 aa11.67□□□□□ -0.54
CHMP2A-202ENST00000596708 PDCD11Q14690 1871 aaKnown RBP11.66□□□□□ -0.54
CHMP2A-202ENST00000596708 ARHGEF35A5YM69 484 aa11.66□□□□□ -0.54
CHMP2A-202ENST00000596708 TTLL13PA6NNM8 815 aa11.66□□□□□ -0.54
CHMP2A-202ENST00000596708 PRKCBP05771 671 aa11.66□□□□□ -0.54
CHMP2A-202ENST00000596708 NEK4P51957 841 aa11.66□□□□□ -0.54
CHMP2A-202ENST00000596708 GUCY1B3Q02153 619 aa11.66□□□□□ -0.54
CHMP2A-202ENST00000596708 ELAVL2Q12926 359 aaKnown RBP11.66□□□□□ -0.54
CHMP2A-202ENST00000596708 ZNF174Q15697 407 aa11.66□□□□□ -0.54
CHMP2A-202ENST00000596708 FAM187BQ17R55 369 aa11.66□□□□□ -0.54
CHMP2A-202ENST00000596708 PADI6Q6TGC4 694 aa11.66□□□□□ -0.54
CHMP2A-202ENST00000596708 NOSTRINQ8IVI9 506 aa11.66□□□□□ -0.54
CHMP2A-202ENST00000596708 ERMNQ8TAM6 284 aa11.66□□□□□ -0.54
CHMP2A-202ENST00000596708 DEPTORQ8TB45 409 aa11.66□□□□□ -0.54
CHMP2A-202ENST00000596708 LNX1Q8TBB1 728 aaPredicted RBP11.66□□□□□ -0.54
CHMP2A-202ENST00000596708 CLSTN3Q9BQT9 956 aa11.66□□□□□ -0.54
CHMP2A-202ENST00000596708 POLR3CQ9BUI4 534 aaPredicted RBP11.66□□□□□ -0.54
CHMP2A-202ENST00000596708 PDZD7Q9H5P4 517 aa11.66□□□□□ -0.54
CHMP2A-202ENST00000596708 FBXW11Q9UKB1 542 aa11.66□□□□□ -0.54
CHMP2A-202ENST00000596708 USP20Q9Y2K6 914 aa11.66□□□□□ -0.54
CHMP2A-202ENST00000596708 GDAQ9Y2T3 454 aa11.66□□□□□ -0.54
CHMP2A-202ENST00000596708 NUMBLQ9Y6R0 609 aa11.66□□□□□ -0.54
CHMP2A-202ENST00000596708 SPTBN4Q9H254 2564 aa11.65□□□□□ -0.54
CHMP2A-202ENST00000596708 ACKR2O00590 384 aa11.65□□□□□ -0.54
CHMP2A-202ENST00000596708 PTGESO14684 152 aa11.65□□□□□ -0.54
CHMP2A-202ENST00000596708 CCL16O15467 120 aa11.65□□□□□ -0.54
CHMP2A-202ENST00000596708 RECQL4O94761 1208 aa11.65□□□□□ -0.54
CHMP2A-202ENST00000596708 KIF4AO95239 1232 aa11.65□□□□□ -0.54
CHMP2A-202ENST00000596708 PAPLNO95428 1278 aa11.65□□□□□ -0.54
Retrieved 100 of 20,778 RNA–protein pairs in 30.7 ms