RNA–Protein interactions for RNA: ENST00000593597.1

USE1-203, Transcript of unconventional SNARE in the ER 1, humanhuman

TSL 2

Gene USE1, Length 587 nt, Biotype protein coding, Subcellular localisation Cytosol .

Download Table  
RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
USE1-203ENST00000593597 STK39Q9UEW8 545 aa11.83□□□□□ -0.52
USE1-203ENST00000593597 ADAM28Q9UKQ2 775 aa11.83□□□□□ -0.52
USE1-203ENST00000593597 COL4A2P08572 1712 aa11.83□□□□□ -0.52
USE1-203ENST00000593597 DNAH14Q0VDD8 3507 aa11.82□□□□□ -0.52
USE1-203ENST00000593597 PTPRZ1P23471 2315 aaPredicted RBP11.82□□□□□ -0.52
USE1-203ENST00000593597 MYH11P35749 1972 aa11.82□□□□□ -0.52
USE1-203ENST00000593597 ADAM12O43184 909 aa11.82□□□□□ -0.52
USE1-203ENST00000593597 CLCN5P51795 746 aa11.82□□□□□ -0.52
USE1-203ENST00000593597 GUCY1B3Q02153 619 aa11.82□□□□□ -0.52
USE1-203ENST00000593597 GRIK3Q13003 919 aa11.82□□□□□ -0.52
USE1-203ENST00000593597 ANKRD1Q15327 319 aa11.82□□□□□ -0.52
USE1-203ENST00000593597 CD300LGQ6UXG3 332 aa11.82□□□□□ -0.52
USE1-203ENST00000593597 FRMD5Q7Z6J6 570 aa11.82□□□□□ -0.52
USE1-203ENST00000593597 RIN2Q8WYP3 895 aaPredicted RBP11.82□□□□□ -0.52
USE1-203ENST00000593597 SMG7Q92540 1137 aaKnown RBP11.82□□□□□ -0.52
USE1-203ENST00000593597 ACSF2Q96CM8 615 aaPredicted RBP11.82□□□□□ -0.52
USE1-203ENST00000593597 NT5C3AQ9H0P0 336 aa11.82□□□□□ -0.52
USE1-203ENST00000593597 POLD4Q9HCU8 107 aa11.82□□□□□ -0.52
USE1-203ENST00000593597 FNIP2Q9P278 1114 aa11.82□□□□□ -0.52
USE1-203ENST00000593597 EPS15L1Q9UBC2 864 aa11.82□□□□□ -0.52
USE1-203ENST00000593597 CACNA1AO00555 2505 aa11.82□□□□□ -0.52
USE1-203ENST00000593597 CACNA1IQ9P0X4 2223 aa11.81□□□□□ -0.52
USE1-203ENST00000593597 CASTOR2A6NHX0 329 aa11.81□□□□□ -0.52
USE1-203ENST00000593597 LRRIQ4A6NIV6 560 aa11.81□□□□□ -0.52
USE1-203ENST00000593597 SPDYE4A6NLX3 237 aa11.81□□□□□ -0.52
USE1-203ENST00000593597 CFHP08603 1231 aa11.81□□□□□ -0.52
USE1-203ENST00000593597 ATP2B1P20020 1258 aa11.81□□□□□ -0.52
USE1-203ENST00000593597 MCM7P33993 719 aa11.81□□□□□ -0.52
USE1-203ENST00000593597 NTHL1P78549 312 aa11.81□□□□□ -0.52
USE1-203ENST00000593597 NBR1Q14596 966 aa11.81□□□□□ -0.52
USE1-203ENST00000593597 FAM187BQ17R55 369 aa11.81□□□□□ -0.52
USE1-203ENST00000593597 CCDC105Q8IYK2 499 aa11.81□□□□□ -0.52
USE1-203ENST00000593597 SIX5Q8N196 739 aa11.81□□□□□ -0.52
USE1-203ENST00000593597 SLC44A3Q8N4M1 653 aa11.81□□□□□ -0.52
USE1-203ENST00000593597 CLSTN3Q9BQT9 956 aa11.81□□□□□ -0.52
USE1-203ENST00000593597 KIFC3Q9BVG8 833 aa11.81□□□□□ -0.52
USE1-203ENST00000593597 COLEC11Q9BWP8 271 aa11.81□□□□□ -0.52
USE1-203ENST00000593597 TRIM6Q9C030 488 aaPredicted RBP11.81□□□□□ -0.52
USE1-203ENST00000593597 BRMS1Q9HCU9 246 aa11.81□□□□□ -0.52
USE1-203ENST00000593597 SNTG2Q9NY99 539 aa11.81□□□□□ -0.52
USE1-203ENST00000593597 PARP2Q9UGN5 583 aa11.81□□□□□ -0.52
USE1-203ENST00000593597 FBXW11Q9UKB1 542 aa11.81□□□□□ -0.52
USE1-203ENST00000593597 ANHXE9PGG2 379 aa11.8□□□□□ -0.52
USE1-203ENST00000593597 RECQL4O94761 1208 aa11.8□□□□□ -0.52
USE1-203ENST00000593597 XRCC6P12956 609 aaKnown RBP eCLIP11.8□□□□□ -0.52
USE1-203ENST00000593597 GBP2P32456 591 aaPredicted RBP11.8□□□□□ -0.52
USE1-203ENST00000593597 NEK4P51957 841 aa11.8□□□□□ -0.52
USE1-203ENST00000593597 TUSC3Q13454 348 aa11.8□□□□□ -0.52
USE1-203ENST00000593597 HTR4Q13639 388 aa11.8□□□□□ -0.52
USE1-203ENST00000593597 HSP90AA2PQ14568 343 aaPredicted RBP11.8□□□□□ -0.52
USE1-203ENST00000593597 USP41Q3LFD5 358 aa11.8□□□□□ -0.52
USE1-203ENST00000593597 POTEHQ6S545 545 aa11.8□□□□□ -0.52
USE1-203ENST00000593597 RSPO2Q6UXX9 243 aaPredicted RBP11.8□□□□□ -0.52
USE1-203ENST00000593597 GET4Q7L5D6 327 aaPredicted RBP11.8□□□□□ -0.52
USE1-203ENST00000593597 NOSTRINQ8IVI9 506 aa11.8□□□□□ -0.52
USE1-203ENST00000593597 GPR65Q8IYL9 337 aa11.8□□□□□ -0.52
USE1-203ENST00000593597 C4orf32Q8N8J7 132 aa11.8□□□□□ -0.52
USE1-203ENST00000593597 LNX1Q8TBB1 728 aaPredicted RBP11.8□□□□□ -0.52
USE1-203ENST00000593597 HDAC7Q8WUI4 952 aa11.8□□□□□ -0.52
USE1-203ENST00000593597 POLR3CQ9BUI4 534 aaPredicted RBP11.8□□□□□ -0.52
USE1-203ENST00000593597 RPP25Q9BUL9 199 aaKnown RBP11.8□□□□□ -0.52
USE1-203ENST00000593597 PRKD2Q9BZL6 878 aa11.8□□□□□ -0.52
USE1-203ENST00000593597 MFSD1Q9H3U5 465 aa11.8□□□□□ -0.52
USE1-203ENST00000593597 TUFT1Q9NNX1 390 aa11.8□□□□□ -0.52
USE1-203ENST00000593597 PRMT7Q9NVM4 692 aaPredicted RBP11.8□□□□□ -0.52
USE1-203ENST00000593597 IGSF9Q9P2J2 1179 aa11.8□□□□□ -0.52
USE1-203ENST00000593597 SSX2IPQ9Y2D8 614 aa11.8□□□□□ -0.52
USE1-203ENST00000593597 EP300Q09472 2414 aaPredicted RBP11.8□□□□□ -0.52
USE1-203ENST00000593597 OTOGLQ3ZCN5 2332 aa11.8□□□□□ -0.52
USE1-203ENST00000593597 ANK1P16157 1881 aa11.79□□□□□ -0.52
USE1-203ENST00000593597 MEFVO15553 781 aaPredicted RBP11.79□□□□□ -0.52
USE1-203ENST00000593597 ZMYND10O75800 440 aa11.79□□□□□ -0.52
USE1-203ENST00000593597 PRKCBP05771 671 aa11.79□□□□□ -0.52
USE1-203ENST00000593597 LAMP2P13473 410 aa11.79□□□□□ -0.52
USE1-203ENST00000593597 CYP11B2P19099 503 aa11.79□□□□□ -0.52
USE1-203ENST00000593597 ZNF174Q15697 407 aa11.79□□□□□ -0.52
USE1-203ENST00000593597 NT5DC1Q5TFE4 455 aa11.79□□□□□ -0.52
USE1-203ENST00000593597 CYP26C1Q6V0L0 522 aa11.79□□□□□ -0.52
USE1-203ENST00000593597 CEP120Q8N960 986 aa11.79□□□□□ -0.52
USE1-203ENST00000593597 C3orf58Q8NDZ4 430 aa11.79□□□□□ -0.52
USE1-203ENST00000593597 MCPH1Q8NEM0 835 aa11.79□□□□□ -0.52
USE1-203ENST00000593597 GPR152Q8TDT2 470 aa11.79□□□□□ -0.52
USE1-203ENST00000593597 PIK3R5Q8WYR1 880 aa11.79□□□□□ -0.52
USE1-203ENST00000593597 PRIMPOLQ96LW4 560 aa11.79□□□□□ -0.52
USE1-203ENST00000593597 PLEKHA4Q9H4M7 779 aa11.79□□□□□ -0.52
USE1-203ENST00000593597 ZDHHC7Q9NXF8 308 aa11.79□□□□□ -0.52
USE1-203ENST00000593597 DLGAP2Q9P1A6 1054 aa11.79□□□□□ -0.52
USE1-203ENST00000593597 CA14Q9ULX7 337 aa11.79□□□□□ -0.52
USE1-203ENST00000593597 SF3B1O75533 1304 aaKnown RBP eCLIP11.79□□□□□ -0.52
USE1-203ENST00000593597 ACKR2O00590 384 aa11.78□□□□□ -0.52
USE1-203ENST00000593597 TADA2AO75478 443 aa11.78□□□□□ -0.52
USE1-203ENST00000593597 C1RP00736 705 aa11.78□□□□□ -0.52
USE1-203ENST00000593597 OR52Z1P0C646 297 aa11.78□□□□□ -0.52
USE1-203ENST00000593597 SRFP11831 508 aa11.78□□□□□ -0.52
USE1-203ENST00000593597 RPA1P27694 616 aa11.78□□□□□ -0.52
USE1-203ENST00000593597 SOX4Q06945 474 aaPredicted RBP11.78□□□□□ -0.52
USE1-203ENST00000593597 ANGPT1Q15389 498 aa11.78□□□□□ -0.52
USE1-203ENST00000593597 PSMD5Q16401 504 aa11.78□□□□□ -0.52
USE1-203ENST00000593597 GLRA4Q5JXX5 417 aa11.78□□□□□ -0.52
USE1-203ENST00000593597 PADI6Q6TGC4 694 aa11.78□□□□□ -0.52
Retrieved 100 of 20,778 RNA–protein pairs in 23.2 ms