RNA–Protein interactions for RNA: ENST00000593425.5

LIG1-205, Transcript of DNA ligase 1, humanhuman

TSL 4

Gene LIG1, Length 575 nt, Biotype protein coding, Subcellular localisation Cytosol .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
LIG1-205ENST00000593425 PIDD1Q9HB75 910 aa18.12■□□□□ 0.49
LIG1-205ENST00000593425 ZDHHC7Q9NXF8 308 aa18.12■□□□□ 0.49
LIG1-205ENST00000593425 FNIP2Q9P278 1114 aa18.12■□□□□ 0.49
LIG1-205ENST00000593425 VWA8A3KMH1 1905 aa18.11■□□□□ 0.49
LIG1-205ENST00000593425 CASTOR2A6NHX0 329 aa18.11■□□□□ 0.49
LIG1-205ENST00000593425 MED24O75448 989 aa18.11■□□□□ 0.49
LIG1-205ENST00000593425 C1RP00736 705 aa18.11■□□□□ 0.49
LIG1-205ENST00000593425 ST3GAL1Q11201 340 aa18.11■□□□□ 0.49
LIG1-205ENST00000593425 HSP90AA2PQ14568 343 aaPredicted RBP18.11■□□□□ 0.49
LIG1-205ENST00000593425 ANGPT1Q15389 498 aa18.11■□□□□ 0.49
LIG1-205ENST00000593425 CDCA2Q69YH5 1023 aaPredicted RBP18.11■□□□□ 0.49
LIG1-205ENST00000593425 GPR65Q8IYL9 337 aa18.11■□□□□ 0.49
LIG1-205ENST00000593425 DTWD2Q8NBA8 298 aa18.11■□□□□ 0.49
LIG1-205ENST00000593425 ST13P5Q8NFI4 369 aaPredicted RBP18.11■□□□□ 0.49
LIG1-205ENST00000593425 BSNDQ8WZ55 320 aa18.11■□□□□ 0.49
LIG1-205ENST00000593425 NKD2Q969F2 451 aaPredicted RBP18.11■□□□□ 0.49
LIG1-205ENST00000593425 PRIMPOLQ96LW4 560 aa18.11■□□□□ 0.49
LIG1-205ENST00000593425 PRKD2Q9BZL6 878 aa18.11■□□□□ 0.49
LIG1-205ENST00000593425 PRMT7Q9NVM4 692 aaPredicted RBP18.11■□□□□ 0.49
LIG1-205ENST00000593425 WNT16Q9UBV4 365 aa18.11■□□□□ 0.49
LIG1-205ENST00000593425 CA14Q9ULX7 337 aa18.11■□□□□ 0.49
LIG1-205ENST00000593425 DOCK6Q96HP0 2047 aa18.1■□□□□ 0.49
LIG1-205ENST00000593425 PTGESO14684 152 aa18.1■□□□□ 0.49
LIG1-205ENST00000593425 TADA2AO75478 443 aa18.1■□□□□ 0.49
LIG1-205ENST00000593425 KIF4AO95239 1232 aa18.1■□□□□ 0.49
LIG1-205ENST00000593425 EDN1P05305 212 aa18.1■□□□□ 0.49
LIG1-205ENST00000593425 SRFP11831 508 aa18.1■□□□□ 0.49
LIG1-205ENST00000593425 XRCC6P12956 609 aaKnown RBP eCLIP18.1■□□□□ 0.49
LIG1-205ENST00000593425 TUSC3Q13454 348 aa18.1■□□□□ 0.49
LIG1-205ENST00000593425 CATSPER3Q86XQ3 398 aa18.1■□□□□ 0.49
LIG1-205ENST00000593425 FZD8Q9H461 694 aa18.1■□□□□ 0.49
LIG1-205ENST00000593425 PDZD7Q9H5P4 517 aa18.1■□□□□ 0.49
LIG1-205ENST00000593425 SNTG2Q9NY99 539 aa18.1■□□□□ 0.49
LIG1-205ENST00000593425 USP20Q9Y2K6 914 aa18.1■□□□□ 0.49
LIG1-205ENST00000593425 DMDP11532 3685 aa18.1■□□□□ 0.49
LIG1-205ENST00000593425 MYH15Q9Y2K3 1946 aa18.1■□□□□ 0.49
LIG1-205ENST00000593425 SF3B1O75533 1304 aaKnown RBP eCLIP18.09■□□□□ 0.49
LIG1-205ENST00000593425 CFAP54Q96N23 3096 aa18.09■□□□□ 0.49
LIG1-205ENST00000593425 ZMYND10O75800 440 aa18.09■□□□□ 0.49
LIG1-205ENST00000593425 LAMP2P13473 410 aa18.09■□□□□ 0.49
LIG1-205ENST00000593425 ATP2B1P20020 1258 aa18.09■□□□□ 0.49
LIG1-205ENST00000593425 MCM7P33993 719 aa18.09■□□□□ 0.49
LIG1-205ENST00000593425 NAB2Q15742 525 aa18.09■□□□□ 0.49
LIG1-205ENST00000593425 FAM187BQ17R55 369 aa18.09■□□□□ 0.49
LIG1-205ENST00000593425 ZBTB8OSQ8IWT0 167 aa18.09■□□□□ 0.49
LIG1-205ENST00000593425 MCPH1Q8NEM0 835 aa18.09■□□□□ 0.49
LIG1-205ENST00000593425 GPR152Q8TDT2 470 aa18.09■□□□□ 0.49
LIG1-205ENST00000593425 TUFT1Q9NNX1 390 aa18.09■□□□□ 0.49
LIG1-205ENST00000593425 FBXW11Q9UKB1 542 aa18.09■□□□□ 0.49
LIG1-205ENST00000593425 COL4A3Q01955 1670 aa18.09■□□□□ 0.49
LIG1-205ENST00000593425 ZFHX2Q9C0A1 2572 aaPredicted RBP18.08■□□□□ 0.49
LIG1-205ENST00000593425 ANHXE9PGG2 379 aa18.08■□□□□ 0.48
LIG1-205ENST00000593425 STK25O00506 426 aa18.08■□□□□ 0.48
LIG1-205ENST00000593425 RECQL4O94761 1208 aa18.08■□□□□ 0.48
LIG1-205ENST00000593425 CREMQ03060 361 aa18.08■□□□□ 0.48
LIG1-205ENST00000593425 HTR4Q13639 388 aa18.08■□□□□ 0.48
LIG1-205ENST00000593425 TRIM29Q14134 588 aa18.08■□□□□ 0.48
LIG1-205ENST00000593425 FAM171A1Q5VUB5 890 aa18.08■□□□□ 0.48
LIG1-205ENST00000593425 NOSTRINQ8IVI9 506 aa18.08■□□□□ 0.48
LIG1-205ENST00000593425 LNX1Q8TBB1 728 aaPredicted RBP18.08■□□□□ 0.48
LIG1-205ENST00000593425 NXPE3Q969Y0 559 aa18.08■□□□□ 0.48
LIG1-205ENST00000593425 CLSTN3Q9BQT9 956 aa18.08■□□□□ 0.48
LIG1-205ENST00000593425 TBC1D17Q9HA65 648 aa18.08■□□□□ 0.48
LIG1-205ENST00000593425 FAM120AQ9NZB2 1118 aaKnown RBP eCLIP18.08■□□□□ 0.48
LIG1-205ENST00000593425 NUMBLQ9Y6R0 609 aa18.08■□□□□ 0.48
LIG1-205ENST00000593425 N4BP3O15049 544 aa18.07■□□□□ 0.48
LIG1-205ENST00000593425 PRKCBP05771 671 aa18.07■□□□□ 0.48
LIG1-205ENST00000593425 NTHL1P78549 312 aa18.07■□□□□ 0.48
LIG1-205ENST00000593425 GUCY1B3Q02153 619 aa18.07■□□□□ 0.48
LIG1-205ENST00000593425 PSMD5Q16401 504 aa18.07■□□□□ 0.48
LIG1-205ENST00000593425 EEF1DP3Q658K8 133 aa18.07■□□□□ 0.48
LIG1-205ENST00000593425 CEP57Q86XR8 500 aa18.07■□□□□ 0.48
LIG1-205ENST00000593425 PIK3R5Q8WYR1 880 aa18.07■□□□□ 0.48
LIG1-205ENST00000593425 TTPALQ9BTX7 342 aa18.07■□□□□ 0.48
LIG1-205ENST00000593425 POLR3CQ9BUI4 534 aaPredicted RBP18.07■□□□□ 0.48
LIG1-205ENST00000593425 CCDC113Q9H0I3 377 aa18.07■□□□□ 0.48
LIG1-205ENST00000593425 ADAM12O43184 909 aa18.06■□□□□ 0.48
LIG1-205ENST00000593425 THP07101 528 aa18.06■□□□□ 0.48
LIG1-205ENST00000593425 LIG1P18858 919 aa18.06■□□□□ 0.48
LIG1-205ENST00000593425 RFX1P22670 979 aa18.06■□□□□ 0.48
LIG1-205ENST00000593425 IGFBP6P24592 240 aaPredicted RBP18.06■□□□□ 0.48
LIG1-205ENST00000593425 PRPF4BQ13523 1007 aaKnown RBP18.06■□□□□ 0.48
LIG1-205ENST00000593425 TMEM132AQ24JP5 1023 aa18.06■□□□□ 0.48
LIG1-205ENST00000593425 PADI6Q6TGC4 694 aa18.06■□□□□ 0.48
LIG1-205ENST00000593425 GRASPQ7Z6J2 395 aaPredicted RBP18.06■□□□□ 0.48
LIG1-205ENST00000593425 ADSSL1Q8N142 457 aa18.06■□□□□ 0.48
LIG1-205ENST00000593425 NACC1Q96RE7 527 aa18.06■□□□□ 0.48
LIG1-205ENST00000593425 RPP25Q9BUL9 199 aaKnown RBP18.06■□□□□ 0.48
LIG1-205ENST00000593425 KIFC3Q9BVG8 833 aa18.06■□□□□ 0.48
LIG1-205ENST00000593425 C2orf40Q9H1Z8 148 aa18.06■□□□□ 0.48
LIG1-205ENST00000593425 ARHGEF3Q9NR81 526 aa18.06■□□□□ 0.48
LIG1-205ENST00000593425 TRIP11Q15643 1979 aa18.05■□□□□ 0.48
LIG1-205ENST00000593425 ACKR2O00590 384 aa18.05■□□□□ 0.48
LIG1-205ENST00000593425 C8AP07357 584 aa18.05■□□□□ 0.48
LIG1-205ENST00000593425 CYP11B2P19099 503 aa18.05■□□□□ 0.48
LIG1-205ENST00000593425 FSHRP23945 695 aa18.05■□□□□ 0.48
LIG1-205ENST00000593425 RPA1P27694 616 aa18.05■□□□□ 0.48
LIG1-205ENST00000593425 NAMPTP43490 491 aa18.05■□□□□ 0.48
LIG1-205ENST00000593425 NEK4P51957 841 aa18.05■□□□□ 0.48
LIG1-205ENST00000593425 MAPK6Q16659 721 aa18.05■□□□□ 0.48
Retrieved 100 of 20,778 RNA–protein pairs in 25.8 ms