RNA–Protein interactions for RNA: ENST00000592176.1

APOC1-207, Transcript of apolipoprotein C1, humanhuman

TSL 5

Gene APOC1, Length 514 nt, Biotype nonsense mediated decay, Subcellular localisation Endoplasmic reticulum .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
APOC1-207ENST00000592176 NCDNQ9UBB6 729 aa10.18□□□□□ -0.78
APOC1-207ENST00000592176 FBXO4Q9UKT5 387 aa10.18□□□□□ -0.78
APOC1-207ENST00000592176 KCNJ14Q9UNX9 436 aa10.18□□□□□ -0.78
APOC1-207ENST00000592176 WDR81Q562E7 1941 aa10.17□□□□□ -0.78
APOC1-207ENST00000592176 WDR87Q6ZQQ6 2873 aa10.17□□□□□ -0.78
APOC1-207ENST00000592176 XYLBO75191 536 aa10.17□□□□□ -0.78
APOC1-207ENST00000592176 NPTXRO95502 500 aa10.17□□□□□ -0.78
APOC1-207ENST00000592176 ARL2P36404 184 aa10.17□□□□□ -0.78
APOC1-207ENST00000592176 PFKPQ01813 784 aa10.17□□□□□ -0.78
APOC1-207ENST00000592176 CYP4A11Q02928 519 aa10.17□□□□□ -0.78
APOC1-207ENST00000592176 MBTD1Q05BQ5 628 aa10.17□□□□□ -0.78
APOC1-207ENST00000592176 GRIK3Q13003 919 aa10.17□□□□□ -0.78
APOC1-207ENST00000592176 TOB2Q14106 344 aaPredicted RBP10.17□□□□□ -0.78
APOC1-207ENST00000592176 HSP90AA2PQ14568 343 aaPredicted RBP10.17□□□□□ -0.78
APOC1-207ENST00000592176 UBXN2BQ14CS0 331 aa10.17□□□□□ -0.78
APOC1-207ENST00000592176 MLF2Q15773 248 aaPredicted RBP10.17□□□□□ -0.78
APOC1-207ENST00000592176 AMHR2Q16671 573 aa10.17□□□□□ -0.78
APOC1-207ENST00000592176 RTP2Q5QGT7 225 aa10.17□□□□□ -0.78
APOC1-207ENST00000592176 ZBTB41Q5SVQ8 909 aa10.17□□□□□ -0.78
APOC1-207ENST00000592176 LIN9Q5TKA1 542 aa10.17□□□□□ -0.78
APOC1-207ENST00000592176 FAM171A1Q5VUB5 890 aa10.17□□□□□ -0.78
APOC1-207ENST00000592176 SLC27A1Q6PCB7 646 aa10.17□□□□□ -0.78
APOC1-207ENST00000592176 RSPO2Q6UXX9 243 aaPredicted RBP10.17□□□□□ -0.78
APOC1-207ENST00000592176 RUFY3Q7L099 469 aa10.17□□□□□ -0.78
APOC1-207ENST00000592176 CDR2LQ86X02 465 aaPredicted RBP10.17□□□□□ -0.78
APOC1-207ENST00000592176 SLFN12Q8IYM2 578 aa10.17□□□□□ -0.78
APOC1-207ENST00000592176 LNX1Q8TBB1 728 aaPredicted RBP10.17□□□□□ -0.78
APOC1-207ENST00000592176 FGF13Q92913 245 aa10.17□□□□□ -0.78
APOC1-207ENST00000592176 AIFM3Q96NN9 605 aa10.17□□□□□ -0.78
APOC1-207ENST00000592176 NELL2Q99435 816 aa10.17□□□□□ -0.78
APOC1-207ENST00000592176 LARP6Q9BRS8 491 aaKnown RBP10.17□□□□□ -0.78
APOC1-207ENST00000592176 TTPALQ9BTX7 342 aa10.17□□□□□ -0.78
APOC1-207ENST00000592176 DDX23Q9BUQ8 820 aaKnown RBP10.17□□□□□ -0.78
APOC1-207ENST00000592176 NXF3Q9H4D5 531 aaKnown RBP10.17□□□□□ -0.78
APOC1-207ENST00000592176 XPNPEP1Q9NQW7 623 aa10.17□□□□□ -0.78
APOC1-207ENST00000592176 ANKEF1Q9NU02 776 aa10.17□□□□□ -0.78
APOC1-207ENST00000592176 POLIQ9UNA4 740 aa10.17□□□□□ -0.78
APOC1-207ENST00000592176 MTF2Q9Y483 593 aaPredicted RBP10.17□□□□□ -0.78
APOC1-207ENST00000592176 SF3B1O75533 1304 aaKnown RBP eCLIP10.16□□□□□ -0.78
APOC1-207ENST00000592176 A0A1B0GUA9 196 aa10.16□□□□□ -0.78
APOC1-207ENST00000592176 SPTLC1O15269 473 aa10.16□□□□□ -0.78
APOC1-207ENST00000592176 NCAM2O15394 837 aa10.16□□□□□ -0.78
APOC1-207ENST00000592176 CCL16O15467 120 aa10.16□□□□□ -0.78
APOC1-207ENST00000592176 B4GALT5O43286 388 aa10.16□□□□□ -0.78
APOC1-207ENST00000592176 DGAT1O75907 488 aa10.16□□□□□ -0.78
APOC1-207ENST00000592176 C8AP07357 584 aa10.16□□□□□ -0.78
APOC1-207ENST00000592176 XBP1P17861 261 aa10.16□□□□□ -0.78
APOC1-207ENST00000592176 CD72P21854 359 aa10.16□□□□□ -0.78
APOC1-207ENST00000592176 MAGEA9P43362 315 aa10.16□□□□□ -0.78
APOC1-207ENST00000592176 STK3Q13188 491 aa10.16□□□□□ -0.78
APOC1-207ENST00000592176 CAPSQ13938 189 aa10.16□□□□□ -0.78
APOC1-207ENST00000592176 UVSSAQ2YD98 709 aa10.16□□□□□ -0.78
APOC1-207ENST00000592176 PDXDC1Q6P996 788 aa10.16□□□□□ -0.78
APOC1-207ENST00000592176 ITFG1Q8TB96 612 aa10.16□□□□□ -0.78
APOC1-207ENST00000592176 ASAP3Q8TDY4 903 aa10.16□□□□□ -0.78
APOC1-207ENST00000592176 PIK3R5Q8WYR1 880 aa10.16□□□□□ -0.78
APOC1-207ENST00000592176 SECISBP2LQ93073 1101 aaKnown RBP10.16□□□□□ -0.78
APOC1-207ENST00000592176 EIF2AK1Q9BQI3 630 aaKnown RBP10.16□□□□□ -0.78
APOC1-207ENST00000592176 PAAF1Q9BRP4 392 aa10.16□□□□□ -0.78
APOC1-207ENST00000592176 PHF20Q9BVI0 1012 aa10.16□□□□□ -0.78
APOC1-207ENST00000592176 NFKBIZQ9BYH8 718 aa10.16□□□□□ -0.78
APOC1-207ENST00000592176 ZSWIM6Q9HCJ5 1215 aa10.16□□□□□ -0.78
APOC1-207ENST00000592176 CACNG4Q9UBN1 327 aa10.16□□□□□ -0.78
APOC1-207ENST00000592176 FBXW11Q9UKB1 542 aa10.16□□□□□ -0.78
APOC1-207ENST00000592176 PCDHGA2Q9Y5H1 932 aa10.16□□□□□ -0.78
APOC1-207ENST00000592176 CYP46A1Q9Y6A2 500 aa10.16□□□□□ -0.78
APOC1-207ENST00000592176 DENND4AQ7Z401 1863 aa10.16□□□□□ -0.78
APOC1-207ENST00000592176 ZNF292O60281 2723 aa10.16□□□□□ -0.78
APOC1-207ENST00000592176 DCHS1Q96JQ0 3298 aa10.15□□□□□ -0.78
APOC1-207ENST00000592176 GVINP1Q7Z2Y8 2422 aa10.15□□□□□ -0.78
APOC1-207ENST00000592176 LYPLA2O95372 231 aa10.15□□□□□ -0.78
APOC1-207ENST00000592176 THP07101 528 aa10.15□□□□□ -0.78
APOC1-207ENST00000592176 GLRA2P23416 452 aa10.15□□□□□ -0.78
APOC1-207ENST00000592176 HOXA9P31269 272 aa10.15□□□□□ -0.78
APOC1-207ENST00000592176 ATXN1P54253 815 aaKnown RBP10.15□□□□□ -0.78
APOC1-207ENST00000592176 ELAVL2Q12926 359 aaKnown RBP10.15□□□□□ -0.78
APOC1-207ENST00000592176 TUSC3Q13454 348 aa10.15□□□□□ -0.78
APOC1-207ENST00000592176 PSMD5Q16401 504 aa10.15□□□□□ -0.78
APOC1-207ENST00000592176 AXDND1Q5T1B0 1012 aaPredicted RBP10.15□□□□□ -0.78
APOC1-207ENST00000592176 PIK3AP1Q6ZUJ8 805 aa10.15□□□□□ -0.78
APOC1-207ENST00000592176 CENPQQ7L2Z9 268 aaPredicted RBP10.15□□□□□ -0.78
APOC1-207ENST00000592176 POTEDQ86YR6 584 aa10.15□□□□□ -0.78
APOC1-207ENST00000592176 HASPINQ8TF76 798 aa10.15□□□□□ -0.78
APOC1-207ENST00000592176 CCDC43Q96MW1 224 aaKnown RBP10.15□□□□□ -0.78
APOC1-207ENST00000592176 CNTNAP3BQ96NU0 1288 aa10.15□□□□□ -0.78
APOC1-207ENST00000592176 HSD17B14Q9BPX1 270 aa10.15□□□□□ -0.78
APOC1-207ENST00000592176 KXD1Q9BQD3 176 aa10.15□□□□□ -0.78
APOC1-207ENST00000592176 CNTNAP3Q9BZ76 1288 aa10.15□□□□□ -0.78
APOC1-207ENST00000592176 LTB4R2Q9NPC1 389 aa10.15□□□□□ -0.78
APOC1-207ENST00000592176 ZSCAN32Q9NX65 697 aa10.15□□□□□ -0.78
APOC1-207ENST00000592176 PCDHA12Q9UN75 941 aa10.15□□□□□ -0.78
APOC1-207ENST00000592176 EP300Q09472 2414 aaPredicted RBP10.14□□□□□ -0.79
APOC1-207ENST00000592176 CASTOR2A6NHX0 329 aa10.14□□□□□ -0.79
APOC1-207ENST00000592176 PRR5-ARHGAP8B1AHC4 643 aa10.14□□□□□ -0.79
APOC1-207ENST00000592176 ADAM12O43184 909 aa10.14□□□□□ -0.79
APOC1-207ENST00000592176 TBC1D4O60343 1298 aa10.14□□□□□ -0.79
APOC1-207ENST00000592176 CDKL5O76039 1030 aa10.14□□□□□ -0.79
APOC1-207ENST00000592176 REC8O95072 547 aa10.14□□□□□ -0.79
APOC1-207ENST00000592176 XRCC6P12956 609 aaKnown RBP eCLIP10.14□□□□□ -0.79
APOC1-207ENST00000592176 OR1D2P34982 312 aa10.14□□□□□ -0.79
Retrieved 100 of 20,778 RNA–protein pairs in 30.3 ms