RNA–Protein interactions for RNA: ENST00000590635.5

CTDP1-206, Transcript of CTD phosphatase subunit 1, humanhuman

TSL 5

Gene CTDP1, Length 489 nt, Biotype protein coding.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CTDP1-206ENST00000590635 MIOSQ9NXC5 875 aa13.34□□□□□ -0.27
CTDP1-206ENST00000590635 KLK14Q9P0G3 267 aa13.34□□□□□ -0.27
CTDP1-206ENST00000590635 SEL1LQ9UBV2 794 aa13.34□□□□□ -0.27
CTDP1-206ENST00000590635 PRKAG3Q9UGI9 489 aa13.34□□□□□ -0.27
CTDP1-206ENST00000590635 CD207Q9UJ71 328 aa13.34□□□□□ -0.27
CTDP1-206ENST00000590635 ATP6V1DQ9Y5K8 247 aa13.34□□□□□ -0.27
CTDP1-206ENST00000590635 GTF3C5Q9Y5Q8 519 aaPredicted RBP13.34□□□□□ -0.27
CTDP1-206ENST00000590635 NPHP3-ACAD11A0A0J9YXS1 232 aa13.33□□□□□ -0.28
CTDP1-206ENST00000590635 TNFRSF10AO00220 468 aa13.33□□□□□ -0.28
CTDP1-206ENST00000590635 PER2O15055 1255 aa13.33□□□□□ -0.28
CTDP1-206ENST00000590635 SOD2P04179 222 aa13.33□□□□□ -0.28
CTDP1-206ENST00000590635 PROZP22891 400 aa13.33□□□□□ -0.28
CTDP1-206ENST00000590635 CA8P35219 290 aa13.33□□□□□ -0.28
CTDP1-206ENST00000590635 STAT6P42226 847 aa13.33□□□□□ -0.28
CTDP1-206ENST00000590635 AMPD3Q01432 767 aa13.33□□□□□ -0.28
CTDP1-206ENST00000590635 COASYQ13057 564 aa13.33□□□□□ -0.28
CTDP1-206ENST00000590635 SMAD4Q13485 552 aaKnown RBP13.33□□□□□ -0.28
CTDP1-206ENST00000590635 EEF1DP3Q658K8 133 aa13.33□□□□□ -0.28
CTDP1-206ENST00000590635 TAS1R3Q7RTX0 852 aa13.33□□□□□ -0.28
CTDP1-206ENST00000590635 TMEM173Q86WV6 379 aaPredicted RBP13.33□□□□□ -0.28
CTDP1-206ENST00000590635 SPRYD3Q8NCJ5 442 aa13.33□□□□□ -0.28
CTDP1-206ENST00000590635 CASP10Q92851 521 aa13.33□□□□□ -0.28
CTDP1-206ENST00000590635 BICD1Q96G01 975 aa13.33□□□□□ -0.28
CTDP1-206ENST00000590635 PYM1Q9BRP8 204 aaKnown RBP13.33□□□□□ -0.28
CTDP1-206ENST00000590635 ZHX3Q9H4I2 956 aa13.33□□□□□ -0.28
CTDP1-206ENST00000590635 SLC38A7Q9NVC3 462 aa13.33□□□□□ -0.28
CTDP1-206ENST00000590635 DPP7Q9UHL4 492 aa13.33□□□□□ -0.28
CTDP1-206ENST00000590635 GDAQ9Y2T3 454 aa13.33□□□□□ -0.28
CTDP1-206ENST00000590635 PRG3Q9Y2Y8 225 aaPredicted RBP13.33□□□□□ -0.28
CTDP1-206ENST00000590635 SPTBN5Q9NRC6 3674 aaKnown RBP13.33□□□□□ -0.28
CTDP1-206ENST00000590635 VCANP13611 3396 aa13.33□□□□□ -0.28
CTDP1-206ENST00000590635 REV3LO60673 3130 aa13.32□□□□□ -0.28
CTDP1-206ENST00000590635 ZC3H11BA0A1B0GUI2 810 aaPredicted RBP13.32□□□□□ -0.28
CTDP1-206ENST00000590635 HIDE1A8MVS5 230 aa13.32□□□□□ -0.28
CTDP1-206ENST00000590635 TADA2AO75478 443 aa13.32□□□□□ -0.28
CTDP1-206ENST00000590635 EDN1P05305 212 aa13.32□□□□□ -0.28
CTDP1-206ENST00000590635 URODP06132 367 aa13.32□□□□□ -0.28
CTDP1-206ENST00000590635 GAP43P17677 238 aa13.32□□□□□ -0.28
CTDP1-206ENST00000590635 GTF2F1P35269 517 aaKnown RBP eCLIP13.32□□□□□ -0.28
CTDP1-206ENST00000590635 GTF2BQ00403 316 aa13.32□□□□□ -0.28
CTDP1-206ENST00000590635 ELAVL2Q12926 359 aaKnown RBP13.32□□□□□ -0.28
CTDP1-206ENST00000590635 KIAA1841Q6NSI8 718 aa13.32□□□□□ -0.28
CTDP1-206ENST00000590635 ELMSAN1Q6PJG2 1045 aa13.32□□□□□ -0.28
CTDP1-206ENST00000590635 IQUBQ8NA54 791 aa13.32□□□□□ -0.28
CTDP1-206ENST00000590635 DDX12PQ92771 950 aa13.32□□□□□ -0.28
CTDP1-206ENST00000590635 MSLNLQ96KJ4 702 aa13.32□□□□□ -0.28
CTDP1-206ENST00000590635 UROC1Q96N76 676 aa13.32□□□□□ -0.28
CTDP1-206ENST00000590635 POP1Q99575 1024 aaKnown RBP13.32□□□□□ -0.28
CTDP1-206ENST00000590635 CDT1Q9H211 546 aa13.32□□□□□ -0.28
CTDP1-206ENST00000590635 ST6GALNAC4Q9H4F1 302 aa13.32□□□□□ -0.28
CTDP1-206ENST00000590635 FAM13BQ9NYF5 915 aa13.32□□□□□ -0.28
CTDP1-206ENST00000590635 ADAM28Q9UKQ2 775 aa13.32□□□□□ -0.28
CTDP1-206ENST00000590635 TBX20Q9UMR3 447 aa13.32□□□□□ -0.28
CTDP1-206ENST00000590635 USP20Q9Y2K6 914 aa13.32□□□□□ -0.28
CTDP1-206ENST00000590635 KIAA1671Q9BY89 1806 aa13.32□□□□□ -0.28
CTDP1-206ENST00000590635 MYO7AQ13402 2215 aa13.31□□□□□ -0.28
CTDP1-206ENST00000590635 K7ENM7 598 aa13.31□□□□□ -0.28
CTDP1-206ENST00000590635 PTGESO14684 152 aa13.31□□□□□ -0.28
CTDP1-206ENST00000590635 LINC01565O15544 149 aa13.31□□□□□ -0.28
CTDP1-206ENST00000590635 TBX10O75333 385 aa13.31□□□□□ -0.28
CTDP1-206ENST00000590635 C1RP00736 705 aa13.31□□□□□ -0.28
CTDP1-206ENST00000590635 PIGRP01833 764 aa13.31□□□□□ -0.28
CTDP1-206ENST00000590635 MATR3P43243 847 aaKnown RBP eCLIP13.31□□□□□ -0.28
CTDP1-206ENST00000590635 ME1P48163 572 aa13.31□□□□□ -0.28
CTDP1-206ENST00000590635 LIG4P49917 911 aa13.31□□□□□ -0.28
CTDP1-206ENST00000590635 CACNB1Q02641 598 aaPredicted RBP13.31□□□□□ -0.28
CTDP1-206ENST00000590635 CREMQ03060 361 aa13.31□□□□□ -0.28
CTDP1-206ENST00000590635 DLX2Q07687 328 aaPredicted RBP13.31□□□□□ -0.28
CTDP1-206ENST00000590635 MCL1Q07820 350 aa13.31□□□□□ -0.28
CTDP1-206ENST00000590635 KCNC3Q14003 757 aa13.31□□□□□ -0.28
CTDP1-206ENST00000590635 HSP90AA2PQ14568 343 aaPredicted RBP13.31□□□□□ -0.28
CTDP1-206ENST00000590635 NOLC1Q14978 699 aaKnown RBP eCLIP13.31□□□□□ -0.28
CTDP1-206ENST00000590635 SMAD2Q15796 467 aaKnown RBP13.31□□□□□ -0.28
CTDP1-206ENST00000590635 USP41Q3LFD5 358 aa13.31□□□□□ -0.28
CTDP1-206ENST00000590635 TPRNQ4KMQ1 711 aa13.31□□□□□ -0.28
CTDP1-206ENST00000590635 XKR4Q5GH76 650 aa13.31□□□□□ -0.28
CTDP1-206ENST00000590635 FOXD4L5Q5VV16 416 aaPredicted RBP13.31□□□□□ -0.28
CTDP1-206ENST00000590635 SLFN12LQ6IEE8 588 aa13.31□□□□□ -0.28
CTDP1-206ENST00000590635 PDXDC1Q6P996 788 aa13.31□□□□□ -0.28
CTDP1-206ENST00000590635 SMRP1Q8NCR6 262 aa13.31□□□□□ -0.28
CTDP1-206ENST00000590635 LRRC15Q8TF66 581 aa13.31□□□□□ -0.28
CTDP1-206ENST00000590635 FOXD4L4Q8WXT5 416 aaPredicted RBP13.31□□□□□ -0.28
CTDP1-206ENST00000590635 HVCN1Q96D96 273 aa13.31□□□□□ -0.28
CTDP1-206ENST00000590635 DDX27Q96GQ7 796 aaKnown RBP13.31□□□□□ -0.28
CTDP1-206ENST00000590635 TSPAN18Q96SJ8 248 aa13.31□□□□□ -0.28
CTDP1-206ENST00000590635 HERC2P3Q9BVR0 1158 aa13.31□□□□□ -0.28
CTDP1-206ENST00000590635 PLEKHA5Q9HAU0 1116 aa13.31□□□□□ -0.28
CTDP1-206ENST00000590635 APOBEC3CQ9NRW3 190 aaKnown RBP eCLIP13.31□□□□□ -0.28
CTDP1-206ENST00000590635 CLEC1BQ9P126 229 aa13.31□□□□□ -0.28
CTDP1-206ENST00000590635 PCDHGC5Q9Y5F6 944 aa13.31□□□□□ -0.28
CTDP1-206ENST00000590635 SF3B1O75533 1304 aaKnown RBP eCLIP13.31□□□□□ -0.28
CTDP1-206ENST00000590635 HNRNPDLO14979 420 aaKnown RBP13.3□□□□□ -0.28
CTDP1-206ENST00000590635 MBTPS2O43462 519 aa13.3□□□□□ -0.28
CTDP1-206ENST00000590635 TRAPPC3O43617 180 aa13.3□□□□□ -0.28
CTDP1-206ENST00000590635 B4GALT3O60512 393 aa13.3□□□□□ -0.28
CTDP1-206ENST00000590635 CLASP2O75122 1294 aaKnown RBP13.3□□□□□ -0.28
CTDP1-206ENST00000590635 EFEMP2O95967 443 aa13.3□□□□□ -0.28
CTDP1-206ENST00000590635 ADH1AP07327 375 aa13.3□□□□□ -0.28
CTDP1-206ENST00000590635 CLTAP09496 248 aa13.3□□□□□ -0.28
CTDP1-206ENST00000590635 KCNE1P15382 129 aa13.3□□□□□ -0.28
Retrieved 100 of 20,778 RNA–protein pairs in 27.5 ms