RNA–Protein interactions for RNA: ENST00000589828.1

VAT1-207, Transcript of vesicle amine transport 1, humanhuman

TSL 2

Gene VAT1, Length 521 nt, Biotype protein coding, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
VAT1-207ENST00000589828 CELF5Q8N6W0 485 aaKnown RBP8.91□□□□□ -0.98
VAT1-207ENST00000589828 ZNF713Q8N859 430 aaPredicted RBP8.91□□□□□ -0.98
VAT1-207ENST00000589828 ING5Q8WYH8 240 aa8.91□□□□□ -0.98
VAT1-207ENST00000589828 TCEANC2Q96MN5 208 aa8.91□□□□□ -0.98
VAT1-207ENST00000589828 NELL2Q99435 816 aa8.91□□□□□ -0.98
VAT1-207ENST00000589828 RIT2Q99578 217 aa8.91□□□□□ -0.98
VAT1-207ENST00000589828 FAM126AQ9BYI3 521 aaPredicted RBP8.91□□□□□ -0.98
VAT1-207ENST00000589828 LSG1Q9H089 658 aaKnown RBP8.91□□□□□ -0.98
VAT1-207ENST00000589828 ZMYND12Q9H0C1 365 aa8.91□□□□□ -0.98
VAT1-207ENST00000589828 CHRDQ9H2X0 955 aa8.91□□□□□ -0.98
VAT1-207ENST00000589828 SH2B1Q9NRF2 756 aaPredicted RBP8.91□□□□□ -0.98
VAT1-207ENST00000589828 RBM28Q9NW13 759 aaKnown RBP8.91□□□□□ -0.98
VAT1-207ENST00000589828 DNMT3BQ9UBC3 853 aaKnown RBP8.91□□□□□ -0.98
VAT1-207ENST00000589828 RAB23Q9ULC3 237 aa8.91□□□□□ -0.98
VAT1-207ENST00000589828 NDRG2Q9UN36 371 aaKnown RBP8.91□□□□□ -0.98
VAT1-207ENST00000589828 COL4A3BPQ9Y5P4 624 aa8.91□□□□□ -0.98
VAT1-207ENST00000589828 ESYT2A0FGR8 921 aa8.9□□□□□ -0.98
VAT1-207ENST00000589828 NCAM2O15394 837 aa8.9□□□□□ -0.98
VAT1-207ENST00000589828 GAS7O60861 476 aa8.9□□□□□ -0.98
VAT1-207ENST00000589828 LRP3O75074 770 aa8.9□□□□□ -0.98
VAT1-207ENST00000589828 HNRNPA1P09651 372 aaKnown RBP eCLIP8.9□□□□□ -0.98
VAT1-207ENST00000589828 SRGAP2CP0DJJ0 459 aa8.9□□□□□ -0.98
VAT1-207ENST00000589828 SFNP31947 248 aa8.9□□□□□ -0.98
VAT1-207ENST00000589828 ADD1P35611 737 aaKnown RBP8.9□□□□□ -0.98
VAT1-207ENST00000589828 SATB1Q01826 763 aa8.9□□□□□ -0.98
VAT1-207ENST00000589828 PFKFB3Q16875 520 aaPredicted RBP8.9□□□□□ -0.98
VAT1-207ENST00000589828 PPM1LQ5SGD2 360 aa8.9□□□□□ -0.98
VAT1-207ENST00000589828 LRCH2Q5VUJ6 765 aa8.9□□□□□ -0.98
VAT1-207ENST00000589828 CREB3L3Q68CJ9 461 aa8.9□□□□□ -0.98
VAT1-207ENST00000589828 DIEXFQ68CQ4 756 aaKnown RBP8.9□□□□□ -0.98
VAT1-207ENST00000589828 TANGO2Q6ICL3 276 aa8.9□□□□□ -0.98
VAT1-207ENST00000589828 MAMSTRQ6ZN01 415 aa8.9□□□□□ -0.98
VAT1-207ENST00000589828 MIER3Q7Z3K6 550 aa8.9□□□□□ -0.98
VAT1-207ENST00000589828 SRGAP1Q7Z6B7 1085 aa8.9□□□□□ -0.98
VAT1-207ENST00000589828 LNX1Q8TBB1 728 aaPredicted RBP8.9□□□□□ -0.98
VAT1-207ENST00000589828 PRPF31Q8WWY3 499 aaKnown RBP8.9□□□□□ -0.98
VAT1-207ENST00000589828 TMEM143Q96AN5 459 aa8.9□□□□□ -0.98
VAT1-207ENST00000589828 MCRS1Q96EZ8 462 aa8.9□□□□□ -0.98
VAT1-207ENST00000589828 CPB2Q96IY4 423 aa8.9□□□□□ -0.98
VAT1-207ENST00000589828 CCDC136Q96JN2 1154 aa8.9□□□□□ -0.98
VAT1-207ENST00000589828 PAAF1Q9BRP4 392 aa8.9□□□□□ -0.98
VAT1-207ENST00000589828 COLEC11Q9BWP8 271 aa8.9□□□□□ -0.98
VAT1-207ENST00000589828 TEKT3Q9BXF9 490 aa8.9□□□□□ -0.98
VAT1-207ENST00000589828 RXFP3Q9NSD7 469 aa8.9□□□□□ -0.98
VAT1-207ENST00000589828 ADAM28Q9UKQ2 775 aa8.9□□□□□ -0.98
VAT1-207ENST00000589828 POLIQ9UNA4 740 aa8.9□□□□□ -0.98
VAT1-207ENST00000589828 ATRXP46100 2492 aa8.9□□□□□ -0.99
VAT1-207ENST00000589828 GOLGA8AA7E2F4 631 aa8.89□□□□□ -0.99
VAT1-207ENST00000589828 GOLGA8BA8MQT2 603 aa8.89□□□□□ -0.99
VAT1-207ENST00000589828 CHURC1-FNTBB4DL54 471 aa8.89□□□□□ -0.99
VAT1-207ENST00000589828 ZBTB43O43298 467 aa8.89□□□□□ -0.99
VAT1-207ENST00000589828 TSPAN1O60635 241 aa8.89□□□□□ -0.99
VAT1-207ENST00000589828 ECI2O75521 394 aa8.89□□□□□ -0.99
VAT1-207ENST00000589828 PROS1P07225 676 aa8.89□□□□□ -0.99
VAT1-207ENST00000589828 FCARP24071 287 aa8.89□□□□□ -0.99
VAT1-207ENST00000589828 AKAP5P24588 427 aa8.89□□□□□ -0.99
VAT1-207ENST00000589828 IGFBP6P24592 240 aaPredicted RBP8.89□□□□□ -0.99
VAT1-207ENST00000589828 HOXA9P31269 272 aa8.89□□□□□ -0.99
VAT1-207ENST00000589828 FNTBP49356 437 aa8.89□□□□□ -0.99
VAT1-207ENST00000589828 NRLP54845 237 aa8.89□□□□□ -0.99
VAT1-207ENST00000589828 EXOSC10Q01780 885 aaKnown RBP8.89□□□□□ -0.99
VAT1-207ENST00000589828 LAMTOR4Q0VGL1 99 aa8.89□□□□□ -0.99
VAT1-207ENST00000589828 SIM2Q14190 667 aaPredicted RBP8.89□□□□□ -0.99
VAT1-207ENST00000589828 NECTIN1Q15223 517 aa8.89□□□□□ -0.99
VAT1-207ENST00000589828 SLC5A9Q2M3M2 681 aa8.89□□□□□ -0.99
VAT1-207ENST00000589828 SYNE3Q6ZMZ3 975 aa8.89□□□□□ -0.99
VAT1-207ENST00000589828 REXO1Q8N1G1 1221 aaKnown RBP8.89□□□□□ -0.99
VAT1-207ENST00000589828 CNNM3Q8NE01 707 aa8.89□□□□□ -0.99
VAT1-207ENST00000589828 RDM1Q8NG50 284 aa8.89□□□□□ -0.99
VAT1-207ENST00000589828 SLC7A14Q8TBB6 771 aa8.89□□□□□ -0.99
VAT1-207ENST00000589828 PIK3R5Q8WYR1 880 aa8.89□□□□□ -0.99
VAT1-207ENST00000589828 APOL6Q9BWW8 343 aa8.89□□□□□ -0.99
VAT1-207ENST00000589828 NXF3Q9H4D5 531 aaKnown RBP8.89□□□□□ -0.99
VAT1-207ENST00000589828 LMAN1LQ9HAT1 526 aa8.89□□□□□ -0.99
VAT1-207ENST00000589828 UBN1Q9NPG3 1134 aa8.89□□□□□ -0.99
VAT1-207ENST00000589828 WRAP73Q9P2S5 460 aaPredicted RBP8.89□□□□□ -0.99
VAT1-207ENST00000589828 C1QTNF9BB2RNN3 333 aa8.88□□□□□ -0.99
VAT1-207ENST00000589828 EML1O00423 815 aa8.88□□□□□ -0.99
VAT1-207ENST00000589828 XYLBO75191 536 aa8.88□□□□□ -0.99
VAT1-207ENST00000589828 TADA2AO75478 443 aa8.88□□□□□ -0.99
VAT1-207ENST00000589828 POU2F2P09086 479 aa8.88□□□□□ -0.99
VAT1-207ENST00000589828 C1QTNF9P0C862 333 aa8.88□□□□□ -0.99
VAT1-207ENST00000589828 CHRNB1P11230 501 aa8.88□□□□□ -0.99
VAT1-207ENST00000589828 CEBPBP17676 345 aa8.88□□□□□ -0.99
VAT1-207ENST00000589828 GRM2Q14416 872 aa8.88□□□□□ -0.99
VAT1-207ENST00000589828 ACAP1Q15027 740 aa8.88□□□□□ -0.99
VAT1-207ENST00000589828 SF3A2Q15428 464 aaKnown RBP8.88□□□□□ -0.99
VAT1-207ENST00000589828 CCDC6Q16204 474 aa8.88□□□□□ -0.99
VAT1-207ENST00000589828 AMHR2Q16671 573 aa8.88□□□□□ -0.99
VAT1-207ENST00000589828 PABPC1LQ4VXU2 614 aaKnown RBP8.88□□□□□ -0.99
VAT1-207ENST00000589828 WDR44Q5JSH3 913 aa8.88□□□□□ -0.99
VAT1-207ENST00000589828 LIN9Q5TKA1 542 aa8.88□□□□□ -0.99
VAT1-207ENST00000589828 RNF149Q8NC42 400 aa8.88□□□□□ -0.99
VAT1-207ENST00000589828 HASPINQ8TF76 798 aa8.88□□□□□ -0.99
VAT1-207ENST00000589828 TTPALQ9BTX7 342 aa8.88□□□□□ -0.99
VAT1-207ENST00000589828 CSRNP2Q9H175 543 aa8.88□□□□□ -0.99
VAT1-207ENST00000589828 CXCL16Q9H2A7 254 aa8.88□□□□□ -0.99
VAT1-207ENST00000589828 DHX33Q9H6R0 707 aaKnown RBP8.88□□□□□ -0.99
VAT1-207ENST00000589828 C6orf50Q9HD87 102 aa8.88□□□□□ -0.99
VAT1-207ENST00000589828 C2orf42Q9NWW7 574 aa8.88□□□□□ -0.99
Retrieved 100 of 20,778 RNA–protein pairs in 16.7 ms