RNA–Protein interactions for RNA: ENST00000589797.5

RETREG3-208, Transcript of reticulophagy regulator family member 3, humanhuman

TSL 2

Gene RETREG3, Length 4,149 nt, Biotype nonsense mediated decay.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
RETREG3-208ENST00000589797 PPP3CAQ08209 521 aa15.56■□□□□ 0.08
RETREG3-208ENST00000589797 TMED2Q15363 201 aa15.56■□□□□ 0.08
RETREG3-208ENST00000589797 EFCAB12Q6NXP0 572 aa15.56■□□□□ 0.08
RETREG3-208ENST00000589797 APBB1IPQ7Z5R6 666 aaPredicted RBP15.56■□□□□ 0.08
RETREG3-208ENST00000589797 FBF1Q8TES7 1133 aa15.56■□□□□ 0.08
RETREG3-208ENST00000589797 ATG4AQ8WYN0 398 aa15.56■□□□□ 0.08
RETREG3-208ENST00000589797 HSD17B14Q9BPX1 270 aa15.56■□□□□ 0.08
RETREG3-208ENST00000589797 AP5M1Q9H0R1 490 aa15.56■□□□□ 0.08
RETREG3-208ENST00000589797 TAS2R14Q9NYV8 317 aa15.56■□□□□ 0.08
RETREG3-208ENST00000589797 L1RE1Q9UN81 338 aa15.56■□□□□ 0.08
RETREG3-208ENST00000589797 GRID2IPA4D2P6 1211 aa15.56■□□□□ 0.08
RETREG3-208ENST00000589797 CYP2C8P10632 490 aa15.56■□□□□ 0.08
RETREG3-208ENST00000589797 C9orf131Q5VYM1 1079 aa15.56■□□□□ 0.08
RETREG3-208ENST00000589797 SLC5A5Q92911 643 aa15.56■□□□□ 0.08
RETREG3-208ENST00000589797 SLC5A4Q9NY91 659 aa15.56■□□□□ 0.08
RETREG3-208ENST00000589797 DYNC1LI1Q9Y6G9 523 aaKnown RBP15.56■□□□□ 0.08
RETREG3-208ENST00000589797 SLIT2O94813 1529 aa15.56■□□□□ 0.08
RETREG3-208ENST00000589797 DDX3XO00571 662 aaKnown RBP eCLIP15.56■□□□□ 0.083e-16■■■■□ 25.4
RETREG3-208ENST00000589797 RTN2O75298 545 aa15.56■□□□□ 0.08
RETREG3-208ENST00000589797 RPS12P25398 132 aaKnown RBP15.56■□□□□ 0.08
RETREG3-208ENST00000589797 PBX1P40424 430 aa15.56■□□□□ 0.08
RETREG3-208ENST00000589797 NOP14P78316 857 aaKnown RBP15.56■□□□□ 0.08
RETREG3-208ENST00000589797 UGCGQ16739 394 aa15.56■□□□□ 0.08
RETREG3-208ENST00000589797 GLRA4Q5JXX5 417 aa15.56■□□□□ 0.08
RETREG3-208ENST00000589797 TWF2Q6IBS0 349 aaKnown RBP15.56■□□□□ 0.08
RETREG3-208ENST00000589797 OLFML3Q9NRN5 406 aa15.56■□□□□ 0.08
RETREG3-208ENST00000589797 COL20A1Q9P218 1284 aa15.56■□□□□ 0.08
RETREG3-208ENST00000589797 AGAP1Q9UPQ3 857 aa15.56■□□□□ 0.08
RETREG3-208ENST00000589797 TRAF3IP3Q9Y228 551 aa15.56■□□□□ 0.08
RETREG3-208ENST00000589797 INPP5FQ9Y2H2 1132 aa15.56■□□□□ 0.08
RETREG3-208ENST00000589797 COMMD10Q9Y6G5 202 aa15.56■□□□□ 0.08
RETREG3-208ENST00000589797 CYP2B6P20813 491 aa15.55■□□□□ 0.08
RETREG3-208ENST00000589797 ARL1P40616 181 aaPredicted RBP15.55■□□□□ 0.08
RETREG3-208ENST00000589797 PPP2R5CQ13362 524 aa15.55■□□□□ 0.08
RETREG3-208ENST00000589797 TTC31Q49AM3 519 aaPredicted RBP15.55■□□□□ 0.08
RETREG3-208ENST00000589797 CYP4A22Q5TCH4 519 aa15.55■□□□□ 0.08
RETREG3-208ENST00000589797 PCNX4Q63HM2 1172 aa15.55■□□□□ 0.08
RETREG3-208ENST00000589797 RSRC2Q7L4I2 434 aaKnown RBP15.55■□□□□ 0.08
RETREG3-208ENST00000589797 VSIG1Q86XK7 387 aa15.55■□□□□ 0.08
RETREG3-208ENST00000589797 USP38Q8NB14 1042 aa15.55■□□□□ 0.08
RETREG3-208ENST00000589797 RBBP8NLQ8NC74 664 aaPredicted RBP15.55■□□□□ 0.08
RETREG3-208ENST00000589797 ZNF263O14978 683 aa15.55■□□□□ 0.08
RETREG3-208ENST00000589797 TGFB2P61812 414 aa15.55■□□□□ 0.08
RETREG3-208ENST00000589797 AADACL2Q6P093 401 aa15.55■□□□□ 0.08
RETREG3-208ENST00000589797 ZC3H18Q86VM9 953 aaKnown RBP15.55■□□□□ 0.08
RETREG3-208ENST00000589797 CCDC60Q8IWA6 550 aaPredicted RBP15.55■□□□□ 0.08
RETREG3-208ENST00000589797 GRK7Q8WTQ7 553 aa15.55■□□□□ 0.08
RETREG3-208ENST00000589797 MKNK1Q9BUB5 465 aa15.55■□□□□ 0.08
RETREG3-208ENST00000589797 SLC38A10Q9HBR0 1119 aa15.55■□□□□ 0.08
RETREG3-208ENST00000589797 ABT1Q9ULW3 272 aaKnown RBP15.55■□□□□ 0.08
RETREG3-208ENST00000589797 STK38LQ9Y2H1 464 aa15.55■□□□□ 0.08
RETREG3-208ENST00000589797 M0QYV0 167 aa15.55■□□□□ 0.08
RETREG3-208ENST00000589797 GJB6O95452 261 aa15.55■□□□□ 0.08
RETREG3-208ENST00000589797 PDGFRBP09619 1106 aa15.55■□□□□ 0.08
RETREG3-208ENST00000589797 ITGB3BPQ13352 177 aaPredicted RBP15.55■□□□□ 0.08
RETREG3-208ENST00000589797 AMHR2Q16671 573 aa15.55■□□□□ 0.08
RETREG3-208ENST00000589797 DARS2Q6PI48 645 aaKnown RBP15.55■□□□□ 0.08
RETREG3-208ENST00000589797 TCP11Q8WWU5 503 aa15.55■□□□□ 0.08
RETREG3-208ENST00000589797 C9orf72Q96LT7 481 aa15.55■□□□□ 0.08
RETREG3-208ENST00000589797 MTMR12Q9C0I1 747 aa15.55■□□□□ 0.08
RETREG3-208ENST00000589797 RANBP17Q9H2T7 1088 aaKnown RBP15.55■□□□□ 0.08
RETREG3-208ENST00000589797 KIAA1586Q9HCI6 787 aa15.55■□□□□ 0.08
RETREG3-208ENST00000589797 MIF4GDA9UHW6 222 aaKnown RBP15.54■□□□□ 0.08
RETREG3-208ENST00000589797 OATP04181 439 aa15.54■□□□□ 0.08
RETREG3-208ENST00000589797 BRD2P25440 801 aaKnown RBP15.54■□□□□ 0.08
RETREG3-208ENST00000589797 HOXA7P31268 230 aaPredicted RBP15.54■□□□□ 0.08
RETREG3-208ENST00000589797 PAPD7Q5XG87 772 aaKnown RBP15.54■□□□□ 0.08
RETREG3-208ENST00000589797 APTXQ7Z2E3 356 aaKnown RBP15.54■□□□□ 0.08
RETREG3-208ENST00000589797 SIAH1Q8IUQ4 282 aa15.54■□□□□ 0.08
RETREG3-208ENST00000589797 KIF12Q96FN5 646 aa15.54■□□□□ 0.08
RETREG3-208ENST00000589797 SPC25Q9HBM1 224 aa15.54■□□□□ 0.08
RETREG3-208ENST00000589797 UBE4BO95155 1302 aa15.54■□□□□ 0.08
RETREG3-208ENST00000589797 IRF6O14896 467 aa15.54■□□□□ 0.08
RETREG3-208ENST00000589797 ALS2CLQ60I27 953 aa15.54■□□□□ 0.08
RETREG3-208ENST00000589797 CACNA2D3Q8IZS8 1091 aa15.54■□□□□ 0.08
RETREG3-208ENST00000589797 COPS5Q92905 334 aa15.54■□□□□ 0.08
RETREG3-208ENST00000589797 CYFIP2Q96F07 1278 aa15.54■□□□□ 0.08
RETREG3-208ENST00000589797 RPS6KC1Q96S38 1066 aa15.54■□□□□ 0.08
RETREG3-208ENST00000589797 HOMER3Q9NSC5 361 aa15.54■□□□□ 0.08
RETREG3-208ENST00000589797 KCND2Q9NZV8 630 aa15.54■□□□□ 0.08
RETREG3-208ENST00000589797 SNX9Q9Y5X1 595 aa15.54■□□□□ 0.08
RETREG3-208ENST00000589797 TGFB1I1O43294 461 aa15.54■□□□□ 0.08
RETREG3-208ENST00000589797 IRX4P78413 519 aa15.54■□□□□ 0.08
RETREG3-208ENST00000589797 ZIM3Q96PE6 472 aa15.54■□□□□ 0.08
RETREG3-208ENST00000589797 ANKEF1Q9NU02 776 aa15.54■□□□□ 0.08
RETREG3-208ENST00000589797 FAM49BQ9NUQ9 324 aa15.54■□□□□ 0.08
RETREG3-208ENST00000589797 PNMA3Q9UL41 463 aa15.54■□□□□ 0.08
RETREG3-208ENST00000589797 HPCAL4Q9UM19 191 aa15.54■□□□□ 0.08
RETREG3-208ENST00000589797 RRP15Q9Y3B9 282 aaKnown RBP15.54■□□□□ 0.08
RETREG3-208ENST00000589797 SYNGAP1Q96PV0 1343 aa15.54■□□□□ 0.08
RETREG3-208ENST00000589797 GJB1P08034 283 aa15.53■□□□□ 0.08
RETREG3-208ENST00000589797 CTSHP09668 335 aa15.53■□□□□ 0.08
RETREG3-208ENST00000589797 GTF2H1P32780 548 aa15.53■□□□□ 0.08
RETREG3-208ENST00000589797 MEA1Q16626 185 aa15.53■□□□□ 0.08
RETREG3-208ENST00000589797 BAP1Q92560 729 aa15.53■□□□□ 0.08
RETREG3-208ENST00000589797 SNX25Q9H3E2 840 aa15.53■□□□□ 0.08
RETREG3-208ENST00000589797 EFCC1Q9HA90 598 aa15.53■□□□□ 0.08
RETREG3-208ENST00000589797 TMEM8AQ9HCN3 771 aa15.53■□□□□ 0.08
RETREG3-208ENST00000589797 SAYSD1Q9NPB0 183 aa15.53■□□□□ 0.08
RETREG3-208ENST00000589797 ASTN1O14525 1302 aa15.53■□□□□ 0.08
Retrieved 100 of 20,778 RNA–protein pairs in 28.2 ms