RNA–Protein interactions for RNA: ENST00000589706.1

SMAD4-208, Transcript of SMAD family member 4, humanhuman

TSL 3

Gene SMAD4, Length 563 nt, Biotype retained intron, Subcellular localisation Cytosol, Ribosome .

Download Table  
RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SMAD4-208ENST00000589706 ZKSCAN7Q9P0L1 754 aaPredicted RBP6.62□□□□□ -1.35
SMAD4-208ENST00000589706 VAV3Q9UKW4 847 aa6.62□□□□□ -1.35
SMAD4-208ENST00000589706 ZBTB21Q9ULJ3 1066 aa6.62□□□□□ -1.35
SMAD4-208ENST00000589706 ATP23Q9Y6H3 246 aa6.62□□□□□ -1.35
SMAD4-208ENST00000589706 IGF2BP2Q9Y6M1 599 aaKnown RBP eCLIP6.62□□□□□ -1.35
SMAD4-208ENST00000589706 DDX49Q9Y6V7 483 aaKnown RBP6.62□□□□□ -1.35
SMAD4-208ENST00000589706 COL6A3P12111 3177 aa6.62□□□□□ -1.35
SMAD4-208ENST00000589706 TRIOBPQ9H2D6 2365 aa6.61□□□□□ -1.35
SMAD4-208ENST00000589706 MYBBP1AQ9BQG0 1328 aaKnown RBP6.61□□□□□ -1.35
SMAD4-208ENST00000589706 H0YGN5 161 aa6.61□□□□□ -1.35
SMAD4-208ENST00000589706 H0YHG0 523 aa6.61□□□□□ -1.35
SMAD4-208ENST00000589706 MYO1CO00159 1063 aa6.61□□□□□ -1.35
SMAD4-208ENST00000589706 MPHOSPH10O00566 681 aaKnown RBP6.61□□□□□ -1.35
SMAD4-208ENST00000589706 EIF3JO75822 258 aaKnown RBP6.61□□□□□ -1.35
SMAD4-208ENST00000589706 IPO7O95373 1038 aaKnown RBP6.61□□□□□ -1.35
SMAD4-208ENST00000589706 IL33O95760 270 aa6.61□□□□□ -1.35
SMAD4-208ENST00000589706 NPR1P16066 1061 aa6.61□□□□□ -1.35
SMAD4-208ENST00000589706 EN2P19622 333 aaPredicted RBP6.61□□□□□ -1.35
SMAD4-208ENST00000589706 USP8P40818 1118 aa6.61□□□□□ -1.35
SMAD4-208ENST00000589706 MAGEA9P43362 315 aa6.61□□□□□ -1.35
SMAD4-208ENST00000589706 RTP1P59025 263 aa6.61□□□□□ -1.35
SMAD4-208ENST00000589706 TPM4P67936 248 aa6.61□□□□□ -1.35
SMAD4-208ENST00000589706 SARNPP82979 210 aaKnown RBP6.61□□□□□ -1.35
SMAD4-208ENST00000589706 NCBP1Q09161 790 aaKnown RBP6.61□□□□□ -1.35
SMAD4-208ENST00000589706 GTF2H3Q13889 308 aa6.61□□□□□ -1.35
SMAD4-208ENST00000589706 ZSCAN23Q3MJ62 389 aa6.61□□□□□ -1.35
SMAD4-208ENST00000589706 MCTP2Q6DN12 878 aa6.61□□□□□ -1.35
SMAD4-208ENST00000589706 EPM2AIP1Q7L775 607 aaPredicted RBP6.61□□□□□ -1.35
SMAD4-208ENST00000589706 ZDHHC13Q8IUH4 622 aa6.61□□□□□ -1.35
SMAD4-208ENST00000589706 ANKRD20A12PQ8NF67 263 aa6.61□□□□□ -1.35
SMAD4-208ENST00000589706 ZBTB9Q96C00 473 aa6.61□□□□□ -1.35
SMAD4-208ENST00000589706 ASIC4Q96FT7 647 aa6.61□□□□□ -1.35
SMAD4-208ENST00000589706 NUP88Q99567 741 aaPredicted RBP6.61□□□□□ -1.35
SMAD4-208ENST00000589706 NOL10Q9BSC4 688 aaKnown RBP6.61□□□□□ -1.35
SMAD4-208ENST00000589706 KCNH7Q9NS40 1196 aa6.61□□□□□ -1.35
SMAD4-208ENST00000589706 EBF1Q9UH73 591 aa6.61□□□□□ -1.35
SMAD4-208ENST00000589706 INVSQ9Y283 1065 aa6.61□□□□□ -1.35
SMAD4-208ENST00000589706 NUB1Q9Y5A7 615 aa6.61□□□□□ -1.35
SMAD4-208ENST00000589706 BCORQ6W2J9 1755 aa6.61□□□□□ -1.35
SMAD4-208ENST00000589706 COL4A5P29400 1685 aa6.61□□□□□ -1.35
SMAD4-208ENST00000589706 KIF7Q2M1P5 1343 aa6.6□□□□□ -1.35
SMAD4-208ENST00000589706 A0A1W2PQ27 194 aa6.6□□□□□ -1.35
SMAD4-208ENST00000589706 A0A1W2PQ64 194 aa6.6□□□□□ -1.35
SMAD4-208ENST00000589706 A0A1W2PQC6 194 aa6.6□□□□□ -1.35
SMAD4-208ENST00000589706 A0A1W2PQD8 194 aa6.6□□□□□ -1.35
SMAD4-208ENST00000589706 LCHNA4D1U4 455 aa6.6□□□□□ -1.35
SMAD4-208ENST00000589706 PRR19A6NJB7 356 aa6.6□□□□□ -1.35
SMAD4-208ENST00000589706 KDM1AO60341 852 aa6.6□□□□□ -1.35
SMAD4-208ENST00000589706 H2AFB1P0C5Y9 115 aa6.6□□□□□ -1.35
SMAD4-208ENST00000589706 H2AFB2P0C5Z0 115 aa6.6□□□□□ -1.35
SMAD4-208ENST00000589706 LPOP22079 712 aaPredicted RBP6.6□□□□□ -1.35
SMAD4-208ENST00000589706 EIF5P55010 431 aaKnown RBP6.6□□□□□ -1.35
SMAD4-208ENST00000589706 TMEM132BQ14DG7 1078 aa6.6□□□□□ -1.35
SMAD4-208ENST00000589706 SEC23AQ15436 765 aa6.6□□□□□ -1.35
SMAD4-208ENST00000589706 PLEKHO1Q53GL0 409 aaPredicted RBP6.6□□□□□ -1.35
SMAD4-208ENST00000589706 JAKMIP3Q5VZ66 844 aa6.6□□□□□ -1.35
SMAD4-208ENST00000589706 ESRP1Q6NXG1 681 aaKnown RBP6.6□□□□□ -1.35
SMAD4-208ENST00000589706 ZNF530Q6P9A1 599 aaPredicted RBP6.6□□□□□ -1.35
SMAD4-208ENST00000589706 CEP128Q6ZU80 1094 aa6.6□□□□□ -1.35
SMAD4-208ENST00000589706 KCTD1Q719H9 257 aa6.6□□□□□ -1.35
SMAD4-208ENST00000589706 GOLGA5Q8TBA6 731 aa6.6□□□□□ -1.35
SMAD4-208ENST00000589706 PPM1EQ8WY54 764 aa6.6□□□□□ -1.35
SMAD4-208ENST00000589706 ERCC4Q92889 916 aaPredicted RBP6.6□□□□□ -1.35
SMAD4-208ENST00000589706 SLC39A13Q96H72 371 aa6.6□□□□□ -1.35
SMAD4-208ENST00000589706 AIFM3Q96NN9 605 aa6.6□□□□□ -1.35
SMAD4-208ENST00000589706 SPOCK3Q9BQ16 436 aa6.6□□□□□ -1.35
SMAD4-208ENST00000589706 TEX13AQ9BXU3 409 aaPredicted RBP6.6□□□□□ -1.35
SMAD4-208ENST00000589706 CARS2Q9HA77 564 aaKnown RBP6.6□□□□□ -1.35
SMAD4-208ENST00000589706 GBA2Q9HCG7 927 aaPredicted RBP6.6□□□□□ -1.35
SMAD4-208ENST00000589706 CHST12Q9NRB3 414 aa6.6□□□□□ -1.35
SMAD4-208ENST00000589706 PSD3Q9NYI0 1048 aa6.6□□□□□ -1.35
SMAD4-208ENST00000589706 LMCD1Q9NZU5 365 aa6.6□□□□□ -1.35
SMAD4-208ENST00000589706 IMPACTQ9P2X3 320 aa6.6□□□□□ -1.35
SMAD4-208ENST00000589706 PAPPA2Q9BXP8 1791 aa6.59□□□□□ -1.35
SMAD4-208ENST00000589706 FAM181BA6NEQ2 426 aa6.59□□□□□ -1.35
SMAD4-208ENST00000589706 ERICH4A6NGS2 130 aa6.59□□□□□ -1.35
SMAD4-208ENST00000589706 ATP8B1O43520 1251 aa6.59□□□□□ -1.35
SMAD4-208ENST00000589706 MAFKO60675 156 aa6.59□□□□□ -1.35
SMAD4-208ENST00000589706 COQ9O75208 318 aa6.59□□□□□ -1.35
SMAD4-208ENST00000589706 USP2O75604 605 aaPredicted RBP6.59□□□□□ -1.35
SMAD4-208ENST00000589706 MBD3O95983 291 aa6.59□□□□□ -1.35
SMAD4-208ENST00000589706 IVLP07476 585 aa6.59□□□□□ -1.35
SMAD4-208ENST00000589706 ZGLP1P0C6A0 271 aa6.59□□□□□ -1.35
SMAD4-208ENST00000589706 IKZF1Q13422 519 aa6.59□□□□□ -1.35
SMAD4-208ENST00000589706 ACAP2Q15057 778 aa6.59□□□□□ -1.35
SMAD4-208ENST00000589706 CCDC96Q2M329 555 aa6.59□□□□□ -1.35
SMAD4-208ENST00000589706 HSF5Q4G112 596 aaPredicted RBP6.59□□□□□ -1.35
SMAD4-208ENST00000589706 EMC4Q5J8M3 183 aa6.59□□□□□ -1.35
SMAD4-208ENST00000589706 STEAP3Q658P3 488 aa6.59□□□□□ -1.35
SMAD4-208ENST00000589706 TSHZ1Q6ZSZ6 1077 aa6.59□□□□□ -1.35
SMAD4-208ENST00000589706 TTLL7Q6ZT98 887 aa6.59□□□□□ -1.35
SMAD4-208ENST00000589706 SRLQ86TD4 932 aa6.59□□□□□ -1.35
SMAD4-208ENST00000589706 SLC51AQ86UW1 340 aa6.59□□□□□ -1.35
SMAD4-208ENST00000589706 SAMD3Q8N6K7 520 aa6.59□□□□□ -1.35
SMAD4-208ENST00000589706 TGFBRAP1Q8WUH2 860 aa6.59□□□□□ -1.35
SMAD4-208ENST00000589706 MISP3Q96FF7 219 aa6.59□□□□□ -1.35
SMAD4-208ENST00000589706 C16orf92Q96LL3 132 aa6.59□□□□□ -1.35
SMAD4-208ENST00000589706 TEKT5Q96M29 485 aa6.59□□□□□ -1.35
SMAD4-208ENST00000589706 LRGUKQ96M69 825 aa6.59□□□□□ -1.35
SMAD4-208ENST00000589706 ACAP3Q96P50 834 aa6.59□□□□□ -1.35
Retrieved 100 of 20,778 RNA–protein pairs in 38.5 ms