RNA–Protein interactions for RNA: ENST00000589116.1

CCBE1-203, Transcript of collagen and calcium binding EGF domains 1, humanhuman

TSL 1 (best)

Gene CCBE1, Length 1,691 nt, Biotype retained intron.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CCBE1-203ENST00000589116 CNTNAP2Q9UHC6 1331 aa13.07□□□□□ -0.32
CCBE1-203ENST00000589116 SZT2Q5T011 3432 aa13.07□□□□□ -0.32
CCBE1-203ENST00000589116 A0A087WZ62 844 aa13.07□□□□□ -0.32
CCBE1-203ENST00000589116 ABLIM1O14639 778 aa13.07□□□□□ -0.32
CCBE1-203ENST00000589116 OGTO15294 1046 aa13.07□□□□□ -0.32
CCBE1-203ENST00000589116 RARBP10826 455 aa13.07□□□□□ -0.32
CCBE1-203ENST00000589116 GNAT1P11488 350 aa13.07□□□□□ -0.32
CCBE1-203ENST00000589116 ANXA13P27216 316 aa13.07□□□□□ -0.32
CCBE1-203ENST00000589116 GPC3P51654 580 aa13.07□□□□□ -0.32
CCBE1-203ENST00000589116 ADAM17P78536 824 aa13.07□□□□□ -0.32
CCBE1-203ENST00000589116 BEX3Q00994 111 aa13.07□□□□□ -0.32
CCBE1-203ENST00000589116 APBA1Q02410 837 aa13.07□□□□□ -0.32
CCBE1-203ENST00000589116 SURF1Q15526 300 aa13.07□□□□□ -0.32
CCBE1-203ENST00000589116 ASIC2Q16515 512 aa13.07□□□□□ -0.32
CCBE1-203ENST00000589116 HGSNATQ68CP4 663 aa13.07□□□□□ -0.32
CCBE1-203ENST00000589116 IQCEQ6IPM2 695 aa13.07□□□□□ -0.32
CCBE1-203ENST00000589116 CRELD2Q6UXH1 353 aaPredicted RBP13.07□□□□□ -0.32
CCBE1-203ENST00000589116 BRSK2Q8IWQ3 736 aa13.07□□□□□ -0.32
CCBE1-203ENST00000589116 KIAA0319LQ8IZA0 1049 aa13.07□□□□□ -0.32
CCBE1-203ENST00000589116 FNBP1Q96RU3 617 aa13.07□□□□□ -0.32
CCBE1-203ENST00000589116 FDXACB1Q9BRP7 624 aaPredicted RBP13.07□□□□□ -0.32
CCBE1-203ENST00000589116 TCHPQ9BT92 498 aa13.07□□□□□ -0.32
CCBE1-203ENST00000589116 STK33Q9BYT3 514 aa13.07□□□□□ -0.32
CCBE1-203ENST00000589116 PTPRHQ9HD43 1115 aa13.07□□□□□ -0.32
CCBE1-203ENST00000589116 SCN10AQ9Y5Y9 1956 aa13.07□□□□□ -0.32
CCBE1-203ENST00000589116 HTTP42858 3142 aa13.07□□□□□ -0.32
CCBE1-203ENST00000589116 FAM189A1O60320 539 aa13.06□□□□□ -0.32
CCBE1-203ENST00000589116 LCA5LO95447 670 aa13.06□□□□□ -0.32
CCBE1-203ENST00000589116 VTNP04004 478 aa13.06□□□□□ -0.32
CCBE1-203ENST00000589116 HMGCRP04035 888 aa13.06□□□□□ -0.32
CCBE1-203ENST00000589116 C6orf222P0C671 652 aaPredicted RBP13.06□□□□□ -0.32
CCBE1-203ENST00000589116 HOXC8P31273 242 aa13.06□□□□□ -0.32
CCBE1-203ENST00000589116 PRKCIP41743 596 aa13.06□□□□□ -0.32
CCBE1-203ENST00000589116 ACOT2P49753 483 aa13.06□□□□□ -0.32
CCBE1-203ENST00000589116 CACNB2Q08289 660 aaPredicted RBP13.06□□□□□ -0.32
CCBE1-203ENST00000589116 PCBP1Q15365 356 aaKnown RBP eCLIP13.06□□□□□ -0.32
CCBE1-203ENST00000589116 ZNF568Q3ZCX4 644 aa13.06□□□□□ -0.32
CCBE1-203ENST00000589116 TDRD12Q587J7 1177 aaKnown RBP13.06□□□□□ -0.32
CCBE1-203ENST00000589116 ZNF662Q6ZS27 426 aa13.06□□□□□ -0.32
CCBE1-203ENST00000589116 ACRBPQ8NEB7 543 aa13.06□□□□□ -0.32
CCBE1-203ENST00000589116 FBXL13Q8NEE6 735 aa13.06□□□□□ -0.32
CCBE1-203ENST00000589116 CD99L2Q8TCZ2 262 aa13.06□□□□□ -0.32
CCBE1-203ENST00000589116 NLRP7Q8WX94 980 aa13.06□□□□□ -0.32
CCBE1-203ENST00000589116 CGRRF1Q99675 332 aa13.06□□□□□ -0.32
CCBE1-203ENST00000589116 MTG1Q9BT17 334 aaPredicted RBP13.06□□□□□ -0.32
CCBE1-203ENST00000589116 DEF6Q9H4E7 631 aa13.06□□□□□ -0.32
CCBE1-203ENST00000589116 MINDY3Q9H8M7 445 aa13.06□□□□□ -0.32
CCBE1-203ENST00000589116 CUL9Q8IWT3 2517 aa13.06□□□□□ -0.32
CCBE1-203ENST00000589116 TTLL13PA6NNM8 815 aa13.05□□□□□ -0.32
CCBE1-203ENST00000589116 ZC3H11AO75152 810 aaKnown RBP eCLIP13.05□□□□□ -0.32
CCBE1-203ENST00000589116 CCDC172P0C7W6 258 aa13.05□□□□□ -0.32
CCBE1-203ENST00000589116 DLATP10515 647 aaKnown RBP13.05□□□□□ -0.32
CCBE1-203ENST00000589116 CYP2C9P11712 490 aa13.05□□□□□ -0.32
CCBE1-203ENST00000589116 FERP16591 822 aa13.05□□□□□ -0.32
CCBE1-203ENST00000589116 EIF4A3P38919 411 aaKnown RBP13.05□□□□□ -0.32
CCBE1-203ENST00000589116 STAT1P42224 750 aa13.05□□□□□ -0.32
CCBE1-203ENST00000589116 KIF11P52732 1056 aa13.05□□□□□ -0.32
CCBE1-203ENST00000589116 AP3M2P53677 418 aa13.05□□□□□ -0.32
CCBE1-203ENST00000589116 POU5F1Q01860 360 aaKnown RBP13.05□□□□□ -0.32
CCBE1-203ENST00000589116 ARHGEF6Q15052 776 aa13.05□□□□□ -0.32
CCBE1-203ENST00000589116 SPA17Q15506 151 aa13.05□□□□□ -0.32
CCBE1-203ENST00000589116 AMHR2Q16671 573 aa13.05□□□□□ -0.32
CCBE1-203ENST00000589116 KYAT1Q16773 422 aa13.05□□□□□ -0.32
CCBE1-203ENST00000589116 TMEM132AQ24JP5 1023 aa13.05□□□□□ -0.32
CCBE1-203ENST00000589116 C15orf39Q6ZRI6 1047 aa13.05□□□□□ -0.32
CCBE1-203ENST00000589116 SV2AQ7L0J3 742 aa13.05□□□□□ -0.32
CCBE1-203ENST00000589116 TXLNBQ8N3L3 684 aa13.05□□□□□ -0.32
CCBE1-203ENST00000589116 FAM81BQ96LP2 452 aa13.05□□□□□ -0.32
CCBE1-203ENST00000589116 SCLT1Q96NL6 688 aa13.05□□□□□ -0.32
CCBE1-203ENST00000589116 DNAJC12Q9UKB3 198 aa13.05□□□□□ -0.32
CCBE1-203ENST00000589116 C17orf102A2RUQ5 167 aa13.05□□□□□ -0.32
CCBE1-203ENST00000589116 F8VZ95 297 aa13.05□□□□□ -0.32
CCBE1-203ENST00000589116 AKR1B10O60218 316 aa13.05□□□□□ -0.32
CCBE1-203ENST00000589116 CST5P28325 142 aaPredicted RBP13.05□□□□□ -0.32
CCBE1-203ENST00000589116 ETF1P62495 437 aaKnown RBP13.05□□□□□ -0.32
CCBE1-203ENST00000589116 IRX5P78411 483 aaPredicted RBP13.05□□□□□ -0.32
CCBE1-203ENST00000589116 CAP1Q01518 475 aa13.05□□□□□ -0.32
CCBE1-203ENST00000589116 KLHL30Q0D2K2 578 aa13.05□□□□□ -0.32
CCBE1-203ENST00000589116 ASTE1Q2TB18 679 aaPredicted RBP13.05□□□□□ -0.32
CCBE1-203ENST00000589116 ZACNQ401N2 412 aa13.05□□□□□ -0.32
CCBE1-203ENST00000589116 ARHGAP29Q52LW3 1261 aa13.05□□□□□ -0.32
CCBE1-203ENST00000589116 GNASQ5JWF2 1037 aa13.05□□□□□ -0.32
CCBE1-203ENST00000589116 MAP3K21Q5TCX8 1036 aa13.05□□□□□ -0.32
CCBE1-203ENST00000589116 PXYLP1Q8TE99 480 aa13.05□□□□□ -0.32
CCBE1-203ENST00000589116 DPF3Q92784 378 aa13.05□□□□□ -0.32
CCBE1-203ENST00000589116 ZNF668Q96K58 619 aaPredicted RBP13.05□□□□□ -0.32
CCBE1-203ENST00000589116 GCOM2Q9BZD3 368 aaPredicted RBP13.05□□□□□ -0.32
CCBE1-203ENST00000589116 HAUS4Q9H6D7 363 aa13.05□□□□□ -0.32
CCBE1-203ENST00000589116 RAB20Q9NX57 234 aa13.05□□□□□ -0.32
CCBE1-203ENST00000589116 AJAP1Q9UKB5 411 aaPredicted RBP13.05□□□□□ -0.32
CCBE1-203ENST00000589116 CPSF3Q9UKF6 684 aaKnown RBP13.05□□□□□ -0.32
CCBE1-203ENST00000589116 REXO2Q9Y3B8 237 aaKnown RBP13.05□□□□□ -0.32
CCBE1-203ENST00000589116 MYADML2A6NDP7 307 aa13.04□□□□□ -0.32
CCBE1-203ENST00000589116 RBAK-RBAKDNI3L0D1 243 aa13.04□□□□□ -0.32
CCBE1-203ENST00000589116 B4GALT5O43286 388 aa13.04□□□□□ -0.32
CCBE1-203ENST00000589116 ADAMTS4O75173 837 aa13.04□□□□□ -0.32
CCBE1-203ENST00000589116 ERLIN2O94905 339 aa13.04□□□□□ -0.32
CCBE1-203ENST00000589116 PLEKP08567 350 aaPredicted RBP13.04□□□□□ -0.32
CCBE1-203ENST00000589116 IQCF3P0C7M6 154 aa13.04□□□□□ -0.32
CCBE1-203ENST00000589116 MCF2P10911 925 aa13.04□□□□□ -0.32
Retrieved 100 of 20,778 RNA–protein pairs in 20.1 ms