RNA–Protein interactions for RNA: ENST00000588687.5

CCDC43-204, Transcript of coiled-coil domain containing 43, humanhuman

TSL 2

Gene CCDC43, Length 721 nt, Biotype protein coding, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CCDC43-204ENST00000588687 PRKD2Q9BZL6 878 aa20.44■□□□□ 0.86
CCDC43-204ENST00000588687 TRIM6Q9C030 488 aaPredicted RBP20.44■□□□□ 0.86
CCDC43-204ENST00000588687 GPRC5CQ9NQ84 441 aa20.44■□□□□ 0.86
CCDC43-204ENST00000588687 POTEMA6NI47 508 aa20.43■□□□□ 0.86
CCDC43-204ENST00000588687 PTGESO14684 152 aa20.43■□□□□ 0.86
CCDC43-204ENST00000588687 SPATA31C1P0DKV0 1188 aa20.43■□□□□ 0.86
CCDC43-204ENST00000588687 LAMP2P13473 410 aa20.43■□□□□ 0.86
CCDC43-204ENST00000588687 NAB2Q15742 525 aa20.43■□□□□ 0.86
CCDC43-204ENST00000588687 RIN2Q8WYP3 895 aaPredicted RBP20.43■□□□□ 0.86
CCDC43-204ENST00000588687 GTF3C6Q969F1 213 aa20.43■□□□□ 0.86
CCDC43-204ENST00000588687 NXPE3Q969Y0 559 aa20.43■□□□□ 0.86
CCDC43-204ENST00000588687 CXCL16Q9H2A7 254 aa20.43■□□□□ 0.86
CCDC43-204ENST00000588687 KLK14Q9P0G3 267 aa20.43■□□□□ 0.86
CCDC43-204ENST00000588687 DLGAP2Q9P1A6 1054 aa20.43■□□□□ 0.86
CCDC43-204ENST00000588687 FBXW11Q9UKB1 542 aa20.43■□□□□ 0.86
CCDC43-204ENST00000588687 NOTCH4Q99466 2003 aa20.43■□□□□ 0.86
CCDC43-204ENST00000588687 A0A087WWV3 80 aa20.42■□□□□ 0.86
CCDC43-204ENST00000588687 BTBD18B2RXH4 712 aa20.42■□□□□ 0.86
CCDC43-204ENST00000588687 NEMFO60524 1076 aa20.42■□□□□ 0.86
CCDC43-204ENST00000588687 USO1O60763 962 aaKnown RBP20.42■□□□□ 0.86
CCDC43-204ENST00000588687 NR1I2O75469 434 aa20.42■□□□□ 0.86
CCDC43-204ENST00000588687 ZMYND10O75800 440 aa20.42■□□□□ 0.86
CCDC43-204ENST00000588687 KIF4AO95239 1232 aa20.42■□□□□ 0.86
CCDC43-204ENST00000588687 EDN1P05305 212 aa20.42■□□□□ 0.86
CCDC43-204ENST00000588687 NCBP1Q09161 790 aaKnown RBP20.42■□□□□ 0.86
CCDC43-204ENST00000588687 HSP90AA2PQ14568 343 aaPredicted RBP20.42■□□□□ 0.86
CCDC43-204ENST00000588687 ME3Q16798 604 aa20.42■□□□□ 0.86
CCDC43-204ENST00000588687 PRSS55Q6UWB4 352 aaPredicted RBP20.42■□□□□ 0.86
CCDC43-204ENST00000588687 GET4Q7L5D6 327 aaPredicted RBP20.42■□□□□ 0.86
CCDC43-204ENST00000588687 GLYCTKQ8IVS8 523 aa20.42■□□□□ 0.86
CCDC43-204ENST00000588687 HACE1Q8IYU2 909 aa20.42■□□□□ 0.86
CCDC43-204ENST00000588687 NECAB1Q8N987 351 aa20.42■□□□□ 0.86
CCDC43-204ENST00000588687 NSUN7Q8NE18 718 aaKnown RBP20.42■□□□□ 0.86
CCDC43-204ENST00000588687 GPR152Q8TDT2 470 aa20.42■□□□□ 0.86
CCDC43-204ENST00000588687 WASF1Q92558 559 aa20.42■□□□□ 0.86
CCDC43-204ENST00000588687 PRIMPOLQ96LW4 560 aa20.42■□□□□ 0.86
CCDC43-204ENST00000588687 TMEM60Q9H2L4 133 aa20.42■□□□□ 0.86
CCDC43-204ENST00000588687 FZD8Q9H461 694 aa20.42■□□□□ 0.86
CCDC43-204ENST00000588687 TBC1D17Q9HA65 648 aa20.42■□□□□ 0.86
CCDC43-204ENST00000588687 FAM120AQ9NZB2 1118 aaKnown RBP eCLIP20.42■□□□□ 0.86
CCDC43-204ENST00000588687 CA14Q9ULX7 337 aa20.42■□□□□ 0.86
CCDC43-204ENST00000588687 SF3B1O75533 1304 aaKnown RBP eCLIP20.42■□□□□ 0.86
CCDC43-204ENST00000588687 ST3GAL1Q11201 340 aa20.41■□□□□ 0.86
CCDC43-204ENST00000588687 TUSC3Q13454 348 aa20.41■□□□□ 0.86
CCDC43-204ENST00000588687 FAM187BQ17R55 369 aa20.41■□□□□ 0.86
CCDC43-204ENST00000588687 ADSSL1Q8N142 457 aa20.41■□□□□ 0.86
CCDC43-204ENST00000588687 PIK3R5Q8WYR1 880 aa20.41■□□□□ 0.86
CCDC43-204ENST00000588687 BSNDQ8WZ55 320 aa20.41■□□□□ 0.86
CCDC43-204ENST00000588687 PDZD7Q9H5P4 517 aa20.41■□□□□ 0.86
CCDC43-204ENST00000588687 SLC2A4RGQ9NR83 387 aa20.41■□□□□ 0.86
CCDC43-204ENST00000588687 NUMBLQ9Y6R0 609 aa20.41■□□□□ 0.86
CCDC43-204ENST00000588687 XRCC6P12956 609 aaKnown RBP eCLIP20.4■□□□□ 0.86
CCDC43-204ENST00000588687 TXKP42681 527 aa20.4■□□□□ 0.86
CCDC43-204ENST00000588687 ANAPC15P60006 121 aa20.4■□□□□ 0.86
CCDC43-204ENST00000588687 CREMQ03060 361 aa20.4■□□□□ 0.86
CCDC43-204ENST00000588687 PHLDB3Q6NSJ2 640 aa20.4■□□□□ 0.86
CCDC43-204ENST00000588687 DIS3L2Q8IYB7 885 aaKnown RBP20.4■□□□□ 0.86
CCDC43-204ENST00000588687 PATJQ8NI35 1801 aa20.4■□□□□ 0.86
CCDC43-204ENST00000588687 HASPINQ8TF76 798 aa20.4■□□□□ 0.86
CCDC43-204ENST00000588687 CLSTN3Q9BQT9 956 aa20.4■□□□□ 0.86
CCDC43-204ENST00000588687 CCDC113Q9H0I3 377 aa20.4■□□□□ 0.86
CCDC43-204ENST00000588687 BRMS1Q9HCU9 246 aa20.4■□□□□ 0.86
CCDC43-204ENST00000588687 ARHGEF3Q9NR81 526 aa20.4■□□□□ 0.86
CCDC43-204ENST00000588687 PRMT7Q9NVM4 692 aaPredicted RBP20.4■□□□□ 0.86
CCDC43-204ENST00000588687 CASTOR2A6NHX0 329 aa20.39■□□□□ 0.85
CCDC43-204ENST00000588687 LRRIQ4A6NIV6 560 aa20.39■□□□□ 0.85
CCDC43-204ENST00000588687 ADAM12O43184 909 aa20.39■□□□□ 0.85
CCDC43-204ENST00000588687 JAK2O60674 1132 aa20.39■□□□□ 0.85
CCDC43-204ENST00000588687 MED24O75448 989 aa20.39■□□□□ 0.85
CCDC43-204ENST00000588687 FOXK2Q01167 660 aa20.39■□□□□ 0.85
CCDC43-204ENST00000588687 CATSPER3Q86XQ3 398 aa20.39■□□□□ 0.85
CCDC43-204ENST00000588687 ST13P5Q8NFI4 369 aaPredicted RBP20.39■□□□□ 0.85
CCDC43-204ENST00000588687 LNX1Q8TBB1 728 aaPredicted RBP20.39■□□□□ 0.85
CCDC43-204ENST00000588687 FGF14Q92915 247 aa20.39■□□□□ 0.85
CCDC43-204ENST00000588687 RPP25Q9BUL9 199 aaKnown RBP20.39■□□□□ 0.85
CCDC43-204ENST00000588687 PIDD1Q9HB75 910 aa20.39■□□□□ 0.85
CCDC43-204ENST00000588687 PARP2Q9UGN5 583 aa20.39■□□□□ 0.85
CCDC43-204ENST00000588687 MIA3Q5JRA6 1907 aa20.39■□□□□ 0.85
CCDC43-204ENST00000588687 CEP250Q9BV73 2442 aa20.38■□□□□ 0.85
CCDC43-204ENST00000588687 GPR179Q6PRD1 2367 aa20.38■□□□□ 0.85
CCDC43-204ENST00000588687 CACNA1IQ9P0X4 2223 aa20.38■□□□□ 0.85
CCDC43-204ENST00000588687 RECQL4O94761 1208 aa20.38■□□□□ 0.85
CCDC43-204ENST00000588687 ANKRD1Q15327 319 aa20.38■□□□□ 0.85
CCDC43-204ENST00000588687 MCPH1Q8NEM0 835 aa20.38■□□□□ 0.85
CCDC43-204ENST00000588687 CCDC43Q96MW1 224 aaKnown RBP20.38■□□□□ 0.85
CCDC43-204ENST00000588687 TTPALQ9BTX7 342 aa20.38■□□□□ 0.85
CCDC43-204ENST00000588687 TRIP11Q15643 1979 aa20.37■□□□□ 0.85
CCDC43-204ENST00000588687 TADA2AO75478 443 aa20.37■□□□□ 0.85
CCDC43-204ENST00000588687 GLULP15104 373 aa20.37■□□□□ 0.85
CCDC43-204ENST00000588687 IGFBP6P24592 240 aaPredicted RBP20.37■□□□□ 0.85
CCDC43-204ENST00000588687 HOXA9P31269 272 aa20.37■□□□□ 0.85
CCDC43-204ENST00000588687 NTHL1P78549 312 aa20.37■□□□□ 0.85
CCDC43-204ENST00000588687 PSMD5Q16401 504 aa20.37■□□□□ 0.85
CCDC43-204ENST00000588687 MAEAQ7L5Y9 396 aa20.37■□□□□ 0.85
CCDC43-204ENST00000588687 GRASPQ7Z6J2 395 aaPredicted RBP20.37■□□□□ 0.85
CCDC43-204ENST00000588687 TUFT1Q9NNX1 390 aa20.37■□□□□ 0.85
CCDC43-204ENST00000588687 SNTG2Q9NY99 539 aa20.37■□□□□ 0.85
CCDC43-204ENST00000588687 USP20Q9Y2K6 914 aa20.37■□□□□ 0.85
CCDC43-204ENST00000588687 DCNP07585 359 aaKnown RBP20.36■□□□□ 0.85
CCDC43-204ENST00000588687 POU2F2P09086 479 aa20.36■□□□□ 0.85
Retrieved 100 of 20,778 RNA–protein pairs in 21.5 ms