RNA–Protein interactions for RNA: ENST00000588483.1

TPM4-209, Transcript of tropomyosin 4, humanhuman

TSL 5

Gene TPM4, Length 801 nt, Biotype protein coding, Subcellular localisation Cytoplasm, Cytosol, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
TPM4-209ENST00000588483 NR1I2O75469 434 aa11.52□□□□□ -0.57
TPM4-209ENST00000588483 TOM1L1O75674 476 aa11.52□□□□□ -0.57
TPM4-209ENST00000588483 CSPG5O95196 566 aa11.52□□□□□ -0.57
TPM4-209ENST00000588483 F13A1P00488 732 aa11.52□□□□□ -0.57
TPM4-209ENST00000588483 C1RP00736 705 aa11.52□□□□□ -0.57
TPM4-209ENST00000588483 PIGRP01833 764 aa11.52□□□□□ -0.57
TPM4-209ENST00000588483 SRGAP2BP0DMP2 458 aa11.52□□□□□ -0.57
TPM4-209ENST00000588483 MCF2P10911 925 aa11.52□□□□□ -0.57
TPM4-209ENST00000588483 IL9P15248 144 aa11.52□□□□□ -0.57
TPM4-209ENST00000588483 ABCD1P33897 745 aa11.52□□□□□ -0.57
TPM4-209ENST00000588483 TXLNAP40222 546 aa11.52□□□□□ -0.57
TPM4-209ENST00000588483 NDUFV1P49821 464 aa11.52□□□□□ -0.57
TPM4-209ENST00000588483 RAD51AP2Q09MP3 1159 aa11.52□□□□□ -0.57
TPM4-209ENST00000588483 PTPN14Q15678 1187 aa11.52□□□□□ -0.57
TPM4-209ENST00000588483 MPZL3Q6UWV2 235 aa11.52□□□□□ -0.57
TPM4-209ENST00000588483 ALKAL1Q6UXT8 129 aa11.52□□□□□ -0.57
TPM4-209ENST00000588483 RBM23Q86U06 439 aaKnown RBP11.52□□□□□ -0.57
TPM4-209ENST00000588483 ZNF396Q96N95 335 aaPredicted RBP11.52□□□□□ -0.57
TPM4-209ENST00000588483 RPS6KC1Q96S38 1066 aa11.52□□□□□ -0.57
TPM4-209ENST00000588483 HERC2P3Q9BVR0 1158 aa11.52□□□□□ -0.57
TPM4-209ENST00000588483 APOL6Q9BWW8 343 aa11.52□□□□□ -0.57
TPM4-209ENST00000588483 CDT1Q9H211 546 aa11.52□□□□□ -0.57
TPM4-209ENST00000588483 ST6GALNAC4Q9H4F1 302 aa11.52□□□□□ -0.57
TPM4-209ENST00000588483 CHST7Q9NS84 486 aa11.52□□□□□ -0.57
TPM4-209ENST00000588483 USP20Q9Y2K6 914 aa11.52□□□□□ -0.57
TPM4-209ENST00000588483 PDCD11Q14690 1871 aaKnown RBP11.51□□□□□ -0.57
TPM4-209ENST00000588483 C19orf67A6NJJ6 358 aa11.51□□□□□ -0.57
TPM4-209ENST00000588483 SPTLC2O15270 562 aa11.51□□□□□ -0.57
TPM4-209ENST00000588483 CLASP2O75122 1294 aaKnown RBP11.51□□□□□ -0.57
TPM4-209ENST00000588483 THP07101 528 aa11.51□□□□□ -0.57
TPM4-209ENST00000588483 HSP90AA1P07900 732 aaKnown RBP11.51□□□□□ -0.57
TPM4-209ENST00000588483 HOXB8P17481 243 aaPredicted RBP11.51□□□□□ -0.57
TPM4-209ENST00000588483 LIG1P18858 919 aa11.51□□□□□ -0.57
TPM4-209ENST00000588483 OR1G1P47890 313 aa11.51□□□□□ -0.57
TPM4-209ENST00000588483 CEBPZQ03701 1054 aaKnown RBP11.51□□□□□ -0.57
TPM4-209ENST00000588483 MCL1Q07820 350 aa11.51□□□□□ -0.57
TPM4-209ENST00000588483 STRN3Q13033 797 aa11.51□□□□□ -0.57
TPM4-209ENST00000588483 TMEM132AQ24JP5 1023 aa11.51□□□□□ -0.57
TPM4-209ENST00000588483 ZNF568Q3ZCX4 644 aa11.51□□□□□ -0.57
TPM4-209ENST00000588483 SPECC1Q5M775 1068 aa11.51□□□□□ -0.57
TPM4-209ENST00000588483 CCDC73Q6ZRK6 1079 aa11.51□□□□□ -0.57
TPM4-209ENST00000588483 HAUS6Q7Z4H7 955 aa11.51□□□□□ -0.57
TPM4-209ENST00000588483 RASSF8Q8NHQ8 419 aa11.51□□□□□ -0.57
TPM4-209ENST00000588483 SUSD6Q92537 303 aa11.51□□□□□ -0.57
TPM4-209ENST00000588483 CASP10Q92851 521 aa11.51□□□□□ -0.57
TPM4-209ENST00000588483 NECAB3Q96P71 396 aaPredicted RBP11.51□□□□□ -0.57
TPM4-209ENST00000588483 PPP1R10Q96QC0 940 aaKnown RBP11.51□□□□□ -0.57
TPM4-209ENST00000588483 TARS2Q9BW92 718 aaKnown RBP11.51□□□□□ -0.57
TPM4-209ENST00000588483 COLEC11Q9BWP8 271 aa11.51□□□□□ -0.57
TPM4-209ENST00000588483 TOPORSQ9NS56 1045 aaPredicted RBP11.51□□□□□ -0.57
TPM4-209ENST00000588483 KLK14Q9P0G3 267 aa11.51□□□□□ -0.57
TPM4-209ENST00000588483 ADAM28Q9UKQ2 775 aa11.51□□□□□ -0.57
TPM4-209ENST00000588483 BARX2Q9UMQ3 279 aaPredicted RBP11.51□□□□□ -0.57
TPM4-209ENST00000588483 SSX2IPQ9Y2D8 614 aa11.51□□□□□ -0.57
TPM4-209ENST00000588483 HCFC2Q9Y5Z7 792 aa11.51□□□□□ -0.57
TPM4-209ENST00000588483 TRIOO75962 3097 aa11.51□□□□□ -0.57
TPM4-209ENST00000588483 ZC3H11BA0A1B0GUI2 810 aaPredicted RBP11.5□□□□□ -0.57
TPM4-209ENST00000588483 FRMD3A2A2Y4 597 aa11.5□□□□□ -0.57
TPM4-209ENST00000588483 TMEM189-UBE2V1I3L0A0 370 aa11.5□□□□□ -0.57
TPM4-209ENST00000588483 TRAK2O60296 914 aa11.5□□□□□ -0.57
TPM4-209ENST00000588483 FAM13AO94988 1023 aa11.5□□□□□ -0.57
TPM4-209ENST00000588483 CXCL14O95715 111 aa11.5□□□□□ -0.57
TPM4-209ENST00000588483 GTF2BQ00403 316 aa11.5□□□□□ -0.57
TPM4-209ENST00000588483 DSG1Q02413 1049 aa11.5□□□□□ -0.57
TPM4-209ENST00000588483 CACNB1Q02641 598 aaPredicted RBP11.5□□□□□ -0.57
TPM4-209ENST00000588483 ZP2Q05996 745 aa11.5□□□□□ -0.57
TPM4-209ENST00000588483 PKP1Q13835 747 aa11.5□□□□□ -0.57
TPM4-209ENST00000588483 HSP90AA2PQ14568 343 aaPredicted RBP11.5□□□□□ -0.57
TPM4-209ENST00000588483 NOLC1Q14978 699 aaKnown RBP eCLIP11.5□□□□□ -0.57
TPM4-209ENST00000588483 STK38Q15208 465 aa11.5□□□□□ -0.57
TPM4-209ENST00000588483 AXDND1Q5T1B0 1012 aaPredicted RBP11.5□□□□□ -0.57
TPM4-209ENST00000588483 KIAA0319Q5VV43 1072 aa11.5□□□□□ -0.57
TPM4-209ENST00000588483 RRAGBQ5VZM2 374 aa11.5□□□□□ -0.57
TPM4-209ENST00000588483 ANKRD54Q6NXT1 300 aa11.5□□□□□ -0.57
TPM4-209ENST00000588483 FUT10Q6P4F1 479 aa11.5□□□□□ -0.57
TPM4-209ENST00000588483 SYCE2Q6PIF2 218 aa11.5□□□□□ -0.57
TPM4-209ENST00000588483 EP400NLQ6ZTU2 488 aa11.5□□□□□ -0.57
TPM4-209ENST00000588483 PPFIBP1Q86W92 1011 aa11.5□□□□□ -0.57
TPM4-209ENST00000588483 MAP4K3Q8IVH8 894 aa11.5□□□□□ -0.57
TPM4-209ENST00000588483 ADHFE1Q8IWW8 467 aa11.5□□□□□ -0.57
TPM4-209ENST00000588483 CEP120Q8N960 986 aa11.5□□□□□ -0.57
TPM4-209ENST00000588483 KCNG4Q8TDN1 519 aa11.5□□□□□ -0.57
TPM4-209ENST00000588483 DNAJC19Q96DA6 116 aa11.5□□□□□ -0.57
TPM4-209ENST00000588483 SNX27Q96L92 541 aa11.5□□□□□ -0.57
TPM4-209ENST00000588483 CCDC94Q9BW85 323 aaPredicted RBP11.5□□□□□ -0.57
TPM4-209ENST00000588483 S1PR5Q9H228 398 aa11.5□□□□□ -0.57
TPM4-209ENST00000588483 CXCL16Q9H2A7 254 aa11.5□□□□□ -0.57
TPM4-209ENST00000588483 RXFP1Q9HBX9 757 aa11.5□□□□□ -0.57
TPM4-209ENST00000588483 CNTN3Q9P232 1028 aa11.5□□□□□ -0.57
TPM4-209ENST00000588483 SEL1LQ9UBV2 794 aa11.5□□□□□ -0.57
TPM4-209ENST00000588483 PRG3Q9Y2Y8 225 aaPredicted RBP11.5□□□□□ -0.57
TPM4-209ENST00000588483 A0A087X0B3 334 aa11.49□□□□□ -0.57
TPM4-209ENST00000588483 MYMKA6NI61 221 aa11.49□□□□□ -0.57
TPM4-209ENST00000588483 F8W810 466 aa11.49□□□□□ -0.57
TPM4-209ENST00000588483 K7ENM7 598 aa11.49□□□□□ -0.57
TPM4-209ENST00000588483 MEFVO15553 781 aaPredicted RBP11.49□□□□□ -0.57
TPM4-209ENST00000588483 FAM189A1O60320 539 aa11.49□□□□□ -0.57
TPM4-209ENST00000588483 CUTAO60888 179 aa11.49□□□□□ -0.57
TPM4-209ENST00000588483 TBCAO75347 108 aaKnown RBP11.49□□□□□ -0.57
TPM4-209ENST00000588483 PPP1R37O75864 691 aa11.49□□□□□ -0.57
Retrieved 100 of 20,778 RNA–protein pairs in 15 ms